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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1011 fasta sequence
[GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA-AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC-AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGGTTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA]
[+] EMBL CD078825 [GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTNTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTT ]
[+] EMBL CD078978 [ TGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCANATCAATCTAATGATTTA ]
[+] EMBL AI067241 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGG ]
[+] EMBL AI068066 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC ]
[+] EMBL AI068129 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAATATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCG ]
[+] EMBL AI067688 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGATAAATATGGTCTTGGAAAGGACAC ANAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTC ]
[+] EMBL AI067488 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACA ]
[+] EMBL AI067984 [ AAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTANACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGA ]
[+] EMBL AI067365 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAAT ]
[+] EMBL AI068299 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTC ]
[+] EMBL AI068000 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGA ]
[+] EMBL AI067171 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTC ]
[+] EMBL AI067916 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGATAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAGAATCACAATTGGATAGATGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGGCAACTGAATCcg ]
[+] EMBL AI068056 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCC ]
[+] EMBL AI067515 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATA ]
[+] EMBL AI068044 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC AAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAA ]
[+] EMBL AI067336 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC ANAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTA ]
[+] EMBL AI067096 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGG AAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACAC A ]
[+] EMBL AI068103 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGNAAGGAC ]
[+] EMBL AI067387 [ TAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACATTCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGT ]
[+] EMBL CD078457 [ TCAGA AAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTNTATTACATTCTA ]
[-] EMBL CD073429 [ AAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTTTATTCCAACTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATTTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATTTAATGATTTAA ]
[-] EMBL CD073285 [ TCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTT TTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGGTTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA]
[-] EMBL CD197157 [ TTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAGTAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTAAGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCAAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGG ]
[-] EMBL CD139795 [ GGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGGCACAACAAAAGATGGGCCAACCATGACTTCTTCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAATCGAGATGGAAATGAATATCGTTATAGTGGTCTTTCGCGATTAGACAAAGCAATAACTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATCGTTT ]
consensusID : consensus_10994#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 860 fasta sequence
[CCTNCGCAGGCCAAAAATTCGGCACGAGGTCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATATGGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGAACGGGTGCCCAACTGATCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTTTCAGACNCAGGGGTCTTTTCTGTGATCCTAANTATTGGACTCTCCGGACCAACCAATTAAACTATTGACTTCAATCCAATCATTTAAGGATTAAAACCTTATTACTTTTAAGGGGGAAACTCAAATTTTAAGCGCAATCCTTAAAAGGGGCCACCAAAAAAGGCCCCCTAGATTTTAGGGAATTTTCTTCCCTCCATATTCCCTGACAAAGGGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGATTTTTACCACAAGGCNNTTTTAGGTGGAGAATTCCTTGGCAAAATAAAAAAAGAGGGTTTAATTTTAGAAAACTCCGGGGGGC]
[+] EMBL CD080000 [CCTNCGCAGGCCAAAAATTCGGCACGAGGTCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGTTGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAACCACTTCCTGGGAGTGATGAGGAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAACTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATATGGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTTGTCAAAAATACTCCGTCAGTCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGAACGGGTGCCCAACTGATCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTTTCAGACNCAGGGGTCTTTTCTGTGATCCTAANTATTGGACTCTCCGGACCAACCAATTAAACTATTGACTTCAATCCAATCATTTAAGGATTAAAACCTTATTACTTTTAAGGGGGAAACTCAAATTTTAAGCGCAATCCTTAAAAGGGGCCACCAAAAAAGGCCCCCTAGATTTTAGGGAATTTTCTTCCCTCCATATTCCCTGACAAAGGGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGATTTTTACCACAAGGCNNTTTTAGGTGGAGAATTCCTTGGCAAAATAAAAAAAGAGGGTTTAATTTTAGAAAACTCCGGGGGGC]
consensusID : consensus_10994#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence
[GAGCCAGATTCGGCCGAGGCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGCCTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTACCTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATCCCAGTTATTGGACTCTTCAGGACCANACCAAGTANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTANGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAATGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAATCAGAATGGAAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAACTATTCCCTTGATCTTAAAAGGGATCCCAAGGGACCTTTAACACCCCAATGGGANCGGTTGGAACCCGAAGGGAACCTTACCCGTGACAAAATTGAAATTGAAATTGCCGTTTTAAATTTTTGGCAAAAAGTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT]
[+] EMBL CD080029 [GAGCCAGATTCGGCCGAGGCTTTACTGCATATGGTCTGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATATGGCCTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTACCTCCGTCAGTCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGAACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTTTCAGACACAGGGGTCTTTCTGTTGATCCCAGTTATTGGACTCTTCAGGACCANACCAAGTANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTANGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAATGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAATCAGAATGGAAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAACTATTCCCTTGATCTTAAAAGGGATCCCAAGGGACCTTTAACACCCCAATGGGANCGGTTGGAACCCGAAGGGAACCTTACCCGTGACAAAATTGAAATTGAAATTGCCGTTTTAAATTTTTGGCAAAAAGTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10994#0 GGTCAACTGAAGGTCTAGTACCAAACTTTAAGAGGTCGTACTGCTCAAACGACCATACAT 60
consensus_10994#2 ------------------------------------------------------------
consensus_10994#1 -------------------------------CCTNCGCAGGCCAAAAATTCGGCACGAGG 29
consensus_10994#0 TCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGT 120
consensus_10994#2 ------------------------------------------------------------
consensus_10994#1 TCAGAAAAAACTTACCTCCTTATAATGACCCGACCTTGGGCTTTTAATTTGATGACCAGT 89
consensus_10994#0 TGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAA 180
consensus_10994#2 ------------------------------------------------------------
consensus_10994#1 TGTCGATCGCTTCATGTTTCTTTACCTCACAACGCCATGTCATATACGAAGGAATCAAAA 149
consensus_10994#0 CCACTTCCTGGGAGTGATGAGGAAAAAAATCCATTGAGATGGGCCAAACGTCTATTCCAA 240
consensus_10994#2 ------------------------------------------------------------
consensus_10994#1 CCACTTCCTGGGAGTGATGAGGAAAAAA-TCCATTGAGATGGGCCAAACGTCTATTCCAA 208
consensus_10994#0 CTGCAAGAATCTCAACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTC 300
consensus_10994#2 ------------------GAGCCAGATTCGGCCGAGG------CTTTACTGCATATGGTC 36
consensus_10994#1 CTGCAAGAATCTCNACCATTGCTCAACCAAGCGAAGGAACCTCCTTTACTGCATATGGTC 268
** * ** *** *****************
consensus_10994#0 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATAT 360
consensus_10994#2 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGAAAAATAT 96
consensus_10994#1 TGTCGGCTAAAGCCTCTCAAGGGAATCATTCACTACCAGAGAGCTATTCTTGANAAATAT 328
***************************************************** ******
consensus_10994#0 GGT-CTTGGAAAGGACACAAAAA-TCACAATTGGATAGTT-GTCAAAAATACTCCGTCAG 417
consensus_10994#2 GGC-CTTGGAAAGGACACAANAAATCACAATTGGATAGTTCGTCAATTAC-CTCCGTCAG 154
consensus_10994#1 GGNTCTTGGAAAGGACACAAAAAATCACAATTGGATAGTT-GTCAAAAATACTCCGTCAG 387
** **************** ** **************** ***** * *********
consensus_10994#0 TCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGA 477
consensus_10994#2 TCAACCGAGATTTATACGAGATAAAACATCTTATTCGGATACAGCCTGTTATTTTCGAGA 214
consensus_10994#1 TCAACCGAGATTTATACGAGATNAAACATCTTATTCGGATACAGCCTNGTATTTTCGAGA 447
********************** ************************ ***********
consensus_10994#0 ACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTT 537
consensus_10994#2 ACGGGTTGCCAACTGAATCTGATTTACTTGCCTGTAGACTGCTTCCGGATGGCAGATTTT 274
consensus_10994#1 ACGGGTGCCCAACTGA-TCTGATTTACTTGCCTGTAAACTGCTTCCGGATGGCAGATTTT 506
****** ******** ******************* ***********************
consensus_10994#0 TCAGACACAGGGGTCTTTCTGTTGATTCTCAGTTATTGGACTCTTCAGGACCAAACCAAG 597
consensus_10994#2 TCAGACACAGGGGTCTTTCTGTTGAT-CCCAGTTATTGGACTCTTCAGGACCANACCAAG 333
consensus_10994#1 TCAGACNCAGGGGTCTTTTCTGTGAT-CCTAANTATTGGACTCTCC-GGACCAA-CCAAT 563
****** *********** **** * * *********** * ****** ****
consensus_10994#0 TAAACCTATCGACATACAATCCAAATCAATCTAATGATTTAAAAGCTTTATTACATTCTA 657
consensus_10994#2 TANACCTATCGACATANCATCCANATCAATCTAATGATTTANNAGCTNTATTACATTCTA 393
consensus_10994#1 TAAAC-TATTGAC-TTCAATCCAATC--ATTTAAGGATT--AAAACCTTATTAC-TTTTA 616
** ** *** *** * ***** ** *** **** * * ****** ** **
consensus_10994#0 AGGAGGAAAACTTCAGATATCTAAGTCGTACATACTTAAGAAAGTGG-CACAACAAAAGA 716
consensus_10994#2 NGGAGGANNACTNCAGATATCTAAGTCGTACATACTTANGAAAGTGGGCACAACAAAGAA 453
consensus_10994#1 AGGGGGAAA--CTCAAAT-TTTAAG-CGCA-ATCCTTAA--AAGGGGCCAC--CAAAAAA 667
** *** ** ** * **** ** * ** **** *** ** *** **** *
consensus_10994#0 TGGGCCAACCATGACTTCT-TCAAGGAGTTTTTCACTTCACACTACAAATATAAACTGAA 775
consensus_10994#2 TGGCCCAACCATGACTNNNCTCAAGGAGNTNTTTACTTCACACTACAAATTTTAACTGAA 513
consensus_10994#1 GGCCCC--------CTAGATTTTAGGGAATTTT--CTTCCCTCCATATTCCCTGACAAAG 717
* ** ** * *** * ** **** * * * * ** *
consensus_10994#0 TCAAGATGG---AAATGAATATCGTTAT-AGTGGTCTTTCGCGATTAGACAAAGCAATAA 831
consensus_10994#2 TCAGAATGG---AAATGAATATCCGTATTANGGGTCCTTCGCGATTTAACCAAGCCATAA 570
consensus_10994#1 GGAGAATTTTTTAAGGGTTTTCCAATAAAAAAAATACTTTCTTTTTTAAAGGCCCCGGGA 777
* ** ** * * * ** * * ** ** * * *
consensus_10994#0 CTCATTCACTTGAGTCTAGAAGGAATCCCGATGGAACTCTTAAGCAACCAAATTGCAATC 891
consensus_10994#2 CT-ATTCCCTTGATCTTAAAAGGGATCCCAAGGGA--CCTTTAACACCCCAAT-GGGANC 626
consensus_10994#1 TT-TTTACCACAAGGCNNTTTTAGGT----GGAGAATTCCTTGGCAAAATAAAAAAAGAG 832
* ** * * * ** * * ** **
consensus_10994#0 GTTTTGATGCTGATTGGAATACTTATCCTTGGTCAAGATATTGAAATTTGAAGTTGTCGG 951
consensus_10994#2 GGTTGGAACCCGAAGGGAAC-CTTACCCGTGACAAA---ATTGAAATT-GAAATTGCCG- 680
consensus_10994#1 GGTTTAATTTT--AGAAAACTCCGGGGGGC------------------------------ 860
* ** * ** *
consensus_10994#0 TTTTAGATTCTCTTGCGACGATCGTTTCCAGCTGTGTACAAATACTTAATATATTTAGGA 1011
consensus_10994#2 TTTTAAATT-TTTGGCAAAAA--GTTCCCGGTTGGCAATTTTTATTTTTTGGAATAAATT 737
consensus_10994#1 ------------------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||