cluster # 1100

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Schistosoma mansoni
cluster # 1100 cluster # 1100 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1100#0 length = 470 sequences # 2

consensusID : consensus_1100#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 470
fasta sequence

                              [ATAGAAAAGATACATTAAAACAAGTTCATCCACATAGCTAGAATTT-AACCATGTG-AAAGTTAGCATTCATAGATGTATCCGCAAACTGGATGGTAGACGGATAGGGCCATATAACACGAACACTATGTGAACTAAGACCACTAAGTTTTATGTCGAATTTACGCCAATTACAATAAGCTAAATCTCCATTTGTAATTGTTATCATTTCACGTTCGGCTTGTGTAAGTGTGATATTATTTCCCTCTAATTTGATTTTATTAGAGTCGAACAGTTCAAAAATCTTCTCAGGACACAATTGCCGATTCTGAGTGATACGGATTAAACCATTGGATAAAATTTGTAGACCATCATCATTATTATTAGCATCGTTTGTTACAGACCAAAGATCACGTAAATTGTCATTTCCAAATAATTCAAAAACGATTGGGTGATTGGAAATATTTCCCCCTATTTGACCAATAGAACGAACG]

[+] EMBL CD171540             [ATAGAAAAGATACATTAAAACAAGTTCATCCACATAGCTAGAATTT AACCATGTG AAAGTTAGCATTCATAGATGTATCCGCAAACTGGATGGTAGACGGATAGGGCCATATAACACGAACACTATGTGAACTAAGACCACTAAGTTTTATGTCGAATTTACGCCAATT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD160119             [        GATACATTAAAACAAGTTCATCCACATAGCTAGAATTTAAACCATGTGAAAAGTTAGCATTCATAGATGTATCCGCAAACTGGATGGTAGACGGATAGGGCCATATAACACGAACACTATGTGAACTAAGACCACTAAGTTTTATGTCGAATTTACGCCAATTACAATAAGCTAAATCTCCATTTGTAATTGTTATCATTTCACGTTCGGCTTGTGTAAGTGTGATATTATTTCCCTCTAATTTGATTTTATTAGAGTCGAACAGTTCAAAAATCTTCTCAGGACACAATTGCCGATTCTGAGTGATACGGATTAAACCATTGGATAAAATTTGTAGACCATCATCATTATTATTAGCATCGTTTGTTACAGACCAAAGATCACGTAAATTGTCATTTCCAAATAATTCAAAAACGATTGGGTGATTGGAAATATTTCCCCCTATTTGACCAATAGAACGAACG]




>consensus_1100#0
ATAGAAAAGATACATTAAAACAAGTTCATCCACATAGCTAGAATTTAACCATGTGAAAGT
TAGCATTCATAGATGTATCCGCAAACTGGATGGTAGACGGATAGGGCCATATAACACGAA
CACTATGTGAACTAAGACCACTAAGTTTTATGTCGAATTTACGCCAATTACAATAAGCTA
AATCTCCATTTGTAATTGTTATCATTTCACGTTCGGCTTGTGTAAGTGTGATATTATTTC
CCTCTAATTTGATTTTATTAGAGTCGAACAGTTCAAAAATCTTCTCAGGACACAATTGCC
GATTCTGAGTGATACGGATTAAACCATTGGATAAAATTTGTAGACCATCATCATTATTAT
TAGCATCGTTTGTTACAGACCAAAGATCACGTAAATTGTCATTTCCAAATAATTCAAAAA
CGATTGGGTGATTGGAAATATTTCCCCCTATTTGACCAATAGAACGAACG

clustalw multiple alignements is not computed in this case