These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11005#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 2881 fasta sequence [AATTTTACTTTAAGAATCTGAAATTGATTACAGAAGCACGTATCATTTGAAAAACAAAACCGCACACATATTAAACCAAATAAGTTTGTATGCATTTGACAAGCATCTTTTTTTCTAAAAAATACAAATAAACTATTCATTACTGTCGGGCTGTTTGTTTGTGTTTTCCTGTGTTATATAAACAATGTCGTCATCATCACAGGAATTCATTGAAAGAAACGAAGCATTTGAAATAAAGAAAGAAAAATTCAGGACAATGAACAAAAGTAGTATTAGTAGTAGTAATGGGGATATGAAATTATTCGATGCAACCAGTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGATAGTAATAATAATAATACAGATAG------TAATAATAATAATAATTTAAGGATTATACAGCAATTTGTGCGGTGAAGAGATAAAGGAACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGGTCATCATAATCATGTTAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTACATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTAAAATATT--AAAAAAAAAGTAACAAGAAACAGAACAGCATTTAGTAACTTAGGTTACATAATGTAAGTAAATTTGTGGGGGTGTGTGTATGTTCTCTATTTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTTAAAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTC-TGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGAAAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAGATATTGATAAACACATAGTAATCATAACAACATAAGACAAAAAAGGATCGTCATTGTGTTTGCATGACAACATTGATTTAAAATAATGAAAATAACCTGAT-GATGAAAATTATATGCATGTTTCATACATTATATAATGAAGTGAAATTATACACATATGTTATAGCGTACATATATATGTTATATTTATATAAAATGGAAGGTGCATACACTAATTCCCTAGACTATAAACTCAATGAAGTGTCTATGA-TTTTTTTTTCAGTTTAACCAGTTATGTTCTGTAAGCATATTCCAAAAACTCCTTTATGCATACATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTATTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAAAATGAATAACCACCGATGTTTTTCTGTATAACAGGATAACTACACAATACAATTAGATTGGATAACCATTGAATTGATTGACTCAGTGAATAAGCTGCAGCACGTGGACCTTGTCTAAATATTTCTGATACAATTAATGCAGGAACTGGACCCAAGCCAAGTGCAAAACTGCATATATAAATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAATCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGCCATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACGATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCAATAAATGTATCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGAT-ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTTGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATA-TTCCTTCTTGGTAGA-TTCAAAA-CGCCAAGATTGTATCCGATTAGAAATGATGATCCAACACATGTTATAAGTACAGTTAAGACAAGTTTCCCTGTGATACCGTTATTTGAAGCTACTCCCATCTTCT] [-] EMBL SMGTP1A [AATTTTACTTTAAGAATCTGAAATTGATTACAGAAGCACGTATCATTTGAAAAACAAAACCGCACACATATTAAACCAAATAAGTTTGTATGCATTTGACAAGCATCTTTTTTTCTAAAAAATACAAATAAACTATTCATTACTGTCGGGCTGTTTGTTTGTGTTTTCCTGTGTTATATAAACAATGTCGTCATCATCACAGGAATTCATTGAAAGAAACGAAGCATTTGAAATAAAGAAAGAAAAATTCAGGACAATGAACAAAAGTAGTATTAGTAGTAGTAATGGGGATATGAAATTATTCGATGCAACCAGTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGATAGTAATAATAATAATACAGATAGTAATAATAATAATAATAATAATTTAAGGATTATACAGCAATTTGTGCGGTGAAGAGATAAAGGGACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGGTCATCATAATCATGTTAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTACATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTAAAATATT AAAAAAAAAGTAACAAGAAACAGAACAGCATTTAGTAACTTAGGTTACATAATGTAAGTAAATTTGTGGGGGTGTGTGTATGTTCTCTATTTGTTAATTTTTTTTATTTTTGACATTACTTATTGTTCAGTCTTTTAAAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTC TGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGAAAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAGATATTGATAAACACATAGTAATCATAACAACATAAGACAAAAAAGGATCGTCATTGTGTTTGCATGACAACATTGATTTAAAATAATGAAAATAACCTGAT GATGAAAATTATATGCATGTTTCATACATTATATAATGAAGTGAAATTATACACATATGTTATAGCGTACATATATATGTTATATTTATATAAAATGGAAGGTGCATACACTAATTCCCTAGACTATAAACTCAATGAAGTGTCTATGA TTTTTTTTTCAGTTTAACCAGTTATGTTCTGTAAGCATATTCCAAAAACTCCTTTATGCATACATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTATTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAAAATGAATAACCACCGATGTTTTTCTGTATAACAGGATAACTACACAATACAATTAGATTGGATAACCATTGAATTGATTGACTCAGTGAATAAGCTGCAGCACGTGGACCTTGTCTAAATATTTCTGATACAATTAATGCAGGAACTGGACCCAAGCCAAGTGCAAAACTGCATATATAAATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAATCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGCCATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACGATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCAATAAATGTATCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCACCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTTGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATA TTCCTTCTTGGTAGA TTCAAAA CGCCAAGATTGTATCCGATTAGAAATGATGATCCAACACATGTTATAAGTACAGTTAAGACAAGTTTCCCTGTGATACCGTTATTTGAAGCTACTCCCATCTTCT] [-] EMBL CD185520 [ CAAATAAACTATTCATTACTGTCGGGCTGTTTGTTTGTGTTTTCCTGTGTTATATAAACAATGTCGTCATCATCACAGGAATTCATTGAAAGAAACGAAGCATTTGAAATAAAGAAAGAAAAATTCAGGACAATGAACAAAAGTAGTATTAGTAGTAGTAATGGGGATATGAAATTATTCGATGCAACCAGTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGATAGTAATAATAATAATACAGATAG TAATAATAATAATAATTTAAGGATTATACAGCGATTTGTGCGGTGAAGAGATAAAGGAACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGGTCATCATAATCATGTCAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTACATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTA ] [-] EMBL CD185512 [ CAAATAAACTATTCATTACTGTCGGGCTGTTTGTTTGTGTTTTCCTGTGTTATATAAACAATGTCGTCATCATCACAGGAATTCATTGAAAGAAACGAAGCATTTGAAATAAAGAAAGAAAAATTCAGGACAATGAACAAAAGTAGTATTAGTAGTAGTAATGGGGATATGAAATTATTCGATGCAACCAGTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGATAGTAATAATAATAATACAGATAG TAATAATAATAATAATTTAAGGATTATACAGCGATTTGTGCGGTGAAGAGATAAAGGAACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGGTCATCATAATCATGTCAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTACATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTA ] [-] EMBL SMAA28855 [ GTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGATAGTAATAATAATAATACAGATAG TAATAATAATAATAATTTAAGGATTATACAGCAATTTGTGCGGTGAAGAGATAAAGGAACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGGTCATCATAATCATGTTAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTACATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTAAAATATTAAAAAAAAAAAGTAACAAGAAACAGAACAGCATTTAGTAACTTAGGTTACATAATGTAAGTA ] [+] EMBL CD068371 [ TTCTCTA TTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTTAAAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTCATGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGAAAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAGATATTGATAAACACATAGTAATCATAACAACATAAGAC AAAAAGGATCGTCATTGTGTTTGCATGACAACATTGATTTAAAATAATGAAAATAACCTGATAGATGAAAATTATATGCATGT ] [+] EMBL CD143446 [ CTATTTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTT AAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTCATGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGAAAGATGAATAGTTAAACGATAAAGAATGAACAGCACACAAAATATAG ] [+] EMBL CD143555 [ CTATTTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTTAAAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTCATGGTGTAAAATCATCGTCATCATCATCATCGTTAACATGAAACAAGTAATGAAAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAG ] [-] EMBL CD143453 [ TATTTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTTAAAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTCATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACTATACGTTCATGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGAAAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAGA ] [+] EMBL CD069168 [ AGAAAGTTGATTGGGACAAATTAAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTCATATGTTTCACAAGTTAAAAACTATACGTTCATGGTGTAAAATCATCGTCATCATCATCATCGATAACATTAAACAAGTAATGAAA ] [-] EMBL CD194551 [ CATATGTTATAGCGTACAAATATATGTTATATTTATATAAAATGGAAGGTGCATACACTAATTCCCTAGACTATAAACTCAATGAAGTGTCTATGATTTTTTTTTTCAGTTTAACCAGTTATGTTCTGTAAGCATATTCCAAAAACTCCTTTATGCATACATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTATTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAAT ] [+] EMBL CD179093 [ TAATTCCCTAGACTATAAACTCAATGAAGTGTCTATGA TTTTTTTTTCAGTTTAACCAGTTATGTTCTGTAAGCATATTCCAAAAACTCCTTTATGCATACATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTATTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAA ] [+] EMBL CD162916 [ GTAAGCATATTCCAAAAACTCCTTTATGCATACATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTATTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAAAATGAATAACCACCGATGTTTTTCTGTATAACAGGATAACTAC ] [-] EMBL CD078445 [ CGTNTGCCTACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTNTTAGTTTCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAAAATGAATAACCACCGATGTTTTTCTGTATAACAGGATAACTACACAATACAATTAGATTGGATAACCATTGAATTGATTGACTCAGTGAATAAGCTGCAGCACGTGGACCTTGTCTAAATATTTCTGATACAATTAATGCAGGAACTGGACCCAAGCCAAGTGCAAAACTGCATATATAAATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAATCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGCCATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACGATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAAT ] [+] EMBL CD066478 [ AATACAATTAGATTGGATAACCATTGAATTGATTGACTCAGTGAATAAGCTGCAGCACGTGGACCTTGTCTAAATATTTCTGATACAATTAATGCAGGAACTGGACCCAAGCCAAGTGCAAAACTGCATATATAAATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAATCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGCCATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACGATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACC ] [-] EMBL CD194479 [ ATATATAAATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAATCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGCCATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACGATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGT ] [-] EMBL CD068304 [ ATTAAGAACTCCTATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCAGCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCAATAAATGTATCGACATTTTCTGTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCTCCACATAGgataca ] [+] EMBL CD168078 [ GCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCAATAAATGTATCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAACGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCA ] [-] EMBL CD167777 [ TAAGAGATGAGTATGTTATACCCGCATTAATTCCAGATAATTGTTGTAAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAATTGTGTAAATTTAAAAACTGATTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCAATAAATGTATCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGGT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCG ] [+] EMBL CD166635 [ ccatAATGT TCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCGGCTTCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGGGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCACCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAANCCAA ] [-] EMBL CD180598 [ TCAGGACAAAACGGTAAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTA ] [-] EMBL CD066367 [ GGTAAAGTACCCAAATATAAAAGCGGGGGGAAGGGCACCCAAAGCAACAGCAAGGGGCCATAGATTTAGTGTATCCACCAAAAATGTAAATGTATTGAAATACAAGAAAGCAAT CCACCAGTTACAGGTAACTGAAGACAAGCACCAATCCCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCACCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCGAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTTGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATA TTCCTTCTTGG AGATTTCAAAA CGCCAAGATTGTATCCGATTAGAAATGATGATCCAACACATGTTATAAGTACAGTTAAGAC ] [+] EMBL CD067407 [ AAAGTAACCAATGAT ATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCATCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATCATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCCACCACAACTGAATGCTCCTATTGCAACGGCAACTACAAATATTGTACTGACGTGAGTGTAAAAGAAGCTTGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATATTTCCTTCTTGGTAGA ATCAAAACCCCCAAAAATGTATCCCATTAAAAATTAAGATCCAACACATGGTATTAGTACCGTTTA ACA ] [-] EMBL CD067299 [ ACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATCATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCCACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACGTGAGTGTAGAAGAAGCTTGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATA TTCCTTCTTGGTAGA TTCAAAA CGCCAAGATTGTATCCGATTAGAAATGATGATCCAACACATGTTATAAGTACAGTTAAGAC ] consensusID : consensus_11005#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 572 fasta sequence [GCCCGGTACCCTGGTTTTGGTGGAAATCACGACAAAACGGTAAAGTAACCAATGATATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTCGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATATTCCTTCTTGGTAGATTCAAAACGCCAAGATTGTATCCGATTAGAAAT] [+] EMBL CD168256 [GCCCGGTACCCTGGTTTTGGTGGAAATCACGACAAAACGGTAAAGTAACCAATGATATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTCGAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATATTCCTTCTTGGTAGATTCAAAACGCCAAGATTGTATCCGATTAGAAAT] [+] EMBL CD060068 [ ggggggttCCTATAGCAACAGCAAGTGGCCATAAATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACA ] [+] EMBL CD071321 [ TGGCCATAGATTTAGTGTATTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCACCGATAATGCCAATAACATTATTGAGTATTANACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTGAATGCTCCTATTGCAGCGGCAACTACNAATATTGT ] [-] EMBL CD064358 [ AGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAACTGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGTGAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAATAACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATAACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATC GCAACCC ] [-] EMBL CD166863 [ GCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCACCGATAATGCCAATAACATTATTGAGTAT ACCATTCCGTCGACCAAGTCCATCAGCAACCC ACCACA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11005#0 AATTTTACTTTAAGAATCTGAAATTGATTACAGAAGCACGTATCATTTGAAAAACAAAAC 60 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 CGCACACATATTAAACCAAATAAGTTTGTATGCATTTGACAAGCATCTTTTTTTCTAAAA 120 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AATACAAATAAACTATTCATTACTGTCGGGCTGTTTGTTTGTGTTTTCCTGTGTTATATA 180 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AACAATGTCGTCATCATCACAGGAATTCATTGAAAGAAACGAAGCATTTGAAATAAAGAA 240 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AGAAAAATTCAGGACAATGAACAAAAGTAGTATTAGTAGTAGTAATGGGGATATGAAATT 300 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATTCGATGCAACCAGTTGACAAGATCTTATGAAAAATATGAATTAGATGACAATAATGAT 360 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AGTAATAATAATAATACAGATAGTAATAATAATAATAATTTAAGGATTATACAGCAATTT 420 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 GTGCGGTGAAGAGATAAAGGAACAGTAATTCAATTCATGAATATAATTTTAAAAAATTGG 480 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TCATCATAATCATGTTAGTTATAACAATAATAATTTTTCATTTTAGAGATCAAAGTTTAC 540 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATTCAAAGCTTATTGAATAAGTAAAGTCACCAGGTAAAATATTAAAAAAAAAGTAACAAG 600 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAACAGAACAGCATTTAGTAACTTAGGTTACATAATGTAAGTAAATTTGTGGGGGTGTGT 660 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 GTATGTTCTCTATTTGTTAATTTTTTTTATTTTTGATATTACTTATTGTTCAGTCTTTTA 720 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAACATCATTGATAATTAATTCTGCTCTTTGTAGAATTACAATGAGCACAATTATTGTTC 780 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATAATACGTAATAGTTCTTTTCTCTTTTATTAAAAAAAAGAAAGTTGATTTGGACAAATT 840 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAGCAAAAACAAAGCCAAAGGAACTCAAAAGAAAGTTATATGTTTCACAAGTTAAAAACT 900 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATACGTTCTGGTGTAAAATCATCGTCATCATCATCATCGTTAACATTAAACAAGTAATGA 960 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAGATGAATAGTTAAATGATAAAGAATGAACAGCACACAAAATATAGATATTGATAAACA 1020 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 CATAGTAATCATAACAACATAAGACAAAAAAGGATCGTCATTGTGTTTGCATGACAACAT 1080 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TGATTTAAAATAATGAAAATAACCTGATGATGAAAATTATATGCATGTTTCATACATTAT 1140 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATAATGAAGTGAAATTATACACATATGTTATAGCGTACATATATATGTTATATTTATATA 1200 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAATGGAAGGTGCATACACTAATTCCCTAGACTATAAACTCAATGAAGTGTCTATGATTT 1260 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TTTTTTCAGTTTAACCAGTTATGTTCTGTAAGCATATTCCAAAAACTCCTTTATGCATAC 1320 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATACCTTTGTCATTGTCACTTCGAGGATAAAGTAATGACTCAGAAGCTGGACCTTCATTA 1380 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TTCCCTTGTTTAGTGAATACAGTAAGATTACGATCTTCCAAAGCTGTAGTACGTTTGCCT 1440 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ACAACAATATTTCCAAATGCAAGATCACGTGCAACTTCATCAAATGTACGATTTTTAGTT 1500 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TCTGGCATAAACAGGAAAAAGAAGATCCAGCAAATCACAACGACCACAAGGAAGGGCAAA 1560 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AATGAATAACCACCGATGTTTTTCTGTATAACAGGATAACTACACAATACAATTAGATTG 1620 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 GATAACCATTGAATTGATTGACTCAGTGAATAAGCTGCAGCACGTGGACCTTGTCTAAAT 1680 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATTTCTGATACAATTAATGCAGGAACTGGACCCAAGCCAAGTGCAAAACTGCATATATAA 1740 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATTAATATCAAAATGATCGATATTATACCCATAGCATTTTTCGTACTTTGCGGACCGGAA 1800 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TCTGCCAAATTAACAAATATCGTAAGTAATAACAAGGATAAAGCTAATGATACTGTAGGC 1860 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 CATAATAATAATGTACGACGTCCAGCACGTTCGATTAGTGGGAGAGAGACAACAGTTACG 1920 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATAACATTAAGAACTCCAATAGCAAAGACACAATATTGTAAGTACACATCAGGAATACCA 1980 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 GCTAATTCTAGCATAAGAGATGAGTATGTTATAACCGCATTAATTCCAGATAATTGTTGT 2040 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 AAAACTTGTATTAAACAAGCAATAAGCACTGGCATTCGAAGATCTCTTTGTGTAAATAAT 2100 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TGTGTAAATTTAAAAACTGGTTGATTTTTTGCAACTTCAATTTCCTCACGTAATTCACCA 2160 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 ATAAATGTATCGACATTTTCTTTAACATTTAATTGCAAAAATGCTTTACGTGCCTCAGCT 2220 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 TCTTTATGTTTTTTCATGTATAAAAATCGTGGACTTTCAGGACAAAACGGTAAAGTAACC 2280 consensus_11005#1 ----------GCCCGGTACCCTGGTTTTGGTGGAAATCACGACAAAACGGTAAAGTAACC 50 * * * * *** ******************** consensus_11005#0 AATGATATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTA 2340 consensus_11005#1 AATGATATAGCTGCTGGAACGGCACCCAAAGCAACAGCAAGTGGCCATAGATTTAGTGTA 110 ************************************************************ consensus_11005#0 TTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAAC 2400 consensus_11005#1 TTCAACAGAAATGTAAATGTAATGAAATACGAGAAAGCAATACCAACAGTTACAGCTAAC 170 ************************************************************ consensus_11005#0 TGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGT 2460 consensus_11005#1 TGATGACAAGCACCAATACCACCACGTAGATCACGTGGTGCCACTTCAGTTAAATAAAGT 230 ************************************************************ consensus_11005#0 GAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAAT 2520 consensus_11005#1 GAAGCTATGCCAATTGTAATGCCGCTATTAATACCAATAACAAAACGACCAACATATAAT 290 ************************************************************ consensus_11005#0 AACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATA 2580 consensus_11005#1 AACGCAGGTTGTTTGACAAGAACACAAGGACCAACAATTACACCGCCGATAATGCCAATA 350 ************************************************************ consensus_11005#0 ACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTG 2640 consensus_11005#1 ACATTATTGAGTATTAAACCATTCCGTCGACCAAGTCCATCAGCAACCCAACCACAACTG 410 ************************************************************ consensus_11005#0 AATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTT 2700 consensus_11005#1 AATGCTCCTATTGCAGCGGCAACTACAAATATTGTACTGACATGAGTGTAGAAGAAGCTC 470 *********************************************************** consensus_11005#0 GAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATATTCCTT 2760 consensus_11005#1 GAATCTAATTCTGGAGTATTTGGAACAACTGTCTCATTGAAATATATTTCAATATTCCTT 530 ************************************************************ consensus_11005#0 CTTGGTAGATTCAAAACGCCAAGATTGTATCCGATTAGAAATGATGATCCAACACATGTT 2820 consensus_11005#1 CTTGGTAGATTCAAAACGCCAAGATTGTATCCGATTAGAAAT------------------ 572 ****************************************** consensus_11005#0 ATAAGTACAGTTAAGACAAGTTTCCCTGTGATACCGTTATTTGAAGCTACTCCCATCTTC 2880 consensus_11005#1 ------------------------------------------------------------ consensus_11005#0 T 2881 consensus_11005#1 - |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||