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Schistosoma mansoni
cluster # 11009 cluster # 11009       Sequences # 28       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11009#0 length = 610 sequences # 3  
consensus_11009#1 length = 414 sequences # 1  
consensus_11009#2 length = 406 sequences # 6  
consensus_11009#3 length = 397 sequences # 18  

consensusID : consensus_11009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 610
fasta sequence
                              [ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAAAAGTTGAATTAAAAAGGAAAATAATTAACGATGGTTAGTAATTTCTAAGTATAATGACTAGAGCTGTTCACATATAGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACTTCTAAAGATCTAAGTCGTATTCATGCCGAAAGTTTACATAAAGGCACTTTAGAATGGCGTTTGAACCACGCAATCGACAATGGACAGATTGACCTANCAGAAAAGATAAGTGACTCTATTGGAGATCGTTTGTTTTCTACAACTTCCGACAAAAATATTCATTTGACTTTGGGCAAGCAAGATGAATACAAAGAGGAATTAAAAAATCGGCGACCTGTTTG]

[+] EMBL CD137952             [ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAAAAGTTGAATTAAAAAGGAAAATAATTAACGATGGTTAGTAATTTCTAAGTATAATGACTAGAGCTGTTCACATATAGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCACCTACT                                                                                                                                                                                                                             ]
[+] EMBL CD138070             [ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGGTTAGTAATTTCTAAGTATAATGACTAGAGCTGTTCACATATAGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT                                                                                                                                                                                                                             ]
[+] EMBL BG932849             [                                                                                                                                                                                                                                                                                           ACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACTTCTAAAGATCTAAGTCGTATTCATGCCGAAAGTTTACATAAAGGCACTTTAGAATGGCGTTTGAACCACGCAATCGACAATGGACAGATTGACCTANCAGAAAAGATAAGTGACTCTATTGGAGATCGTTTGTTTTCTACAACTTCCGACAAAAATATTCATTTGACTTTGGGCAAGCAAGATGAATACAAAGAGGAATTAAAAAATCGGCGACCTGTTTG]


>consensus_11009#0 ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGT GAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGT TCGACGAAGATCCGAAAAGTTGAATTAAAAAGGAAAATAATTAACGATGGTTAGTAATTT CTAAGTATAATGACTAGAGCTGTTCACATATAGTTCTAGAAATTGTGCCAAAATCATCAG CGACTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTAC GACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGACTCCCC TCTCTTCAGTTGTTTTGAACCCATCTACTTCTAAAGATCTAAGTCGTATTCATGCCGAAA GTTTACATAAAGGCACTTTAGAATGGCGTTTGAACCACGCAATCGACAATGGACAGATTG ACCTANCAGAAAAGATAAGTGACTCTATTGGAGATCGTTTGTTTTCTACAACTTCCGACA AAAATATTCATTTGACTTTGGGCAAGCAAGATGAATACAAAGAGGAATTAAAAAATCGGC GACCTGTTTG



consensusID : consensus_11009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence
                              [ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAGTTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGATAAATCAGATACTCCATCCATTGTCAGTGCCTGTTTACTAAACTAACTGTATGACTTTTCTTATCCAGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]

[+] EMBL CD137916             [ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAGTTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGATAAATCAGATACTCCATCCATTGTCAGTGCCTGTTTACTAAACTAACTGTATGACTTTTCTTATCCAGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]


>consensus_11009#1 ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGT GAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGT TCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATT GTGCCAAAATCATCAGCGACTGCTGCATGCCTCCGTGAAATTGAGTTCGAGATAAATAAA CAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACA AATAAAACGATAAATCAGATACTCCATCCATTGTCAGTGCCTGTTTACTAAACTAACTGT ATGACTTTTCTTATCCAGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT



consensusID : consensus_11009#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 406
fasta sequence
                              [TGGTATTGTGATAGATGGGGGCTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACACACCTTATATTGAGTATCTGACCTTCGCAACATGGGATTTTGTA]

[-] EMBL BG931362             [TGGTATTGTGATAGATGGGGGCTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGAC                                             ]
[-] EMBL BG931352             [                      TCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGAC                                             ]
[-] EMBL BG931351             [                                    ACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTACAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAGATATACAAGATATAACTGTACGACCTTGGCAAAGAAGAAAACTGATGAAGTCAATAGATTCTACATATAAAACGAC                                             ]
[-] EMBL BG931374             [                                          TGGACTAAATGAAGGAGCATTTGCCGATCCGTAGAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGAC                                             ]
[+] EMBL CD138003             [                                                  ATGAGGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGTCACACCTTATATTGAGTATCTGACCTTCGCAACATGGGATTTTGTA]
[-] EMBL BG931361             [                                                                                       TTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGAC                                             ]


>consensus_11009#2 TGGTATTGTGATAGATGGGGGCTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGC ATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTAT CTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGA TCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAAT CATCGGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAA CTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGA CACACCTTATATTGAGTATCTGACCTTCGCAACATGGGATTTTGTA



consensusID : consensus_11009#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 397
fasta sequence
                              [TCCGAGGTCATCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC-TT-CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG-AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]

[-] EMBL BG932789             [TCCGAGGTCATCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAACTCAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGGTGC                                                                                                                                            ]
[-] EMBL BG932784             [          TCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG932858             [          TCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGCGAAGTTGAATTAAAAAGGAAAATAATTAGCGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG932879             [          TCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG932826             [          TCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG931458             [                    ggGGTCAACTGACGGGCGACTTACTGGACCAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG931211             [                        TCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[-] EMBL BG931456             [                        TCAACTGACGGGCGACTTACTGGACTAAATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGC                                                                                                                                            ]
[+] EMBL CD138044             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAG   GTACCTT TCGTTAAAAGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAAATGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGCACCCATCTACT]
[+] EMBL CD137911             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATT AAAAGGGAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAAGGAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD137967             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAGATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTTGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGGAAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD137919             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD138031             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGCAAGTAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD137954             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAAGTGTTTTGAACCCATCTACT]
[+] EMBL CD138034             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTATAAATTGTGCCAAAATCATCATCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAAC                                                                                                         ]
[+] EMBL CD137963             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCTGAAATTACATTCTC TT CAGGAACGCAAACGCCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD137922             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]
[+] EMBL CD137989             [                                                    ATGAAGGAGCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATTATCTCAGAAATTACATTCTC TT CAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAAGATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT]


>consensus_11009#3 TCCGAGGTCATCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGA GCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATT ATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAA GATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATGTTCTAGAAATTGTGCCAAA ATCATCAGCGGCTGCTGCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATAT AACTGTACGACCTTGGAAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAAC GACTCCCCTCTCTTCAGTTGTTTTGAACCCATCTACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11009#0      ----------------------------------------------------ATGAAGGA 8
consensus_11009#3      TCCGAGGTCATCTACAGATTATGGTCAACTGACGGGCGACTTACTGGACTAAATGAAGGA 60
consensus_11009#2      --TGGTATTGTGATAGATGGGGGCTCAACTGACGGGCGACTTACTGGACTAAATGAAGGA 58
consensus_11009#1      ----------------------------------------------------ATGAAGGA 8
                                                                           ********

consensus_11009#0      GCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATT 68
consensus_11009#3      GCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATT 120
consensus_11009#2      GCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATT 118
consensus_11009#1      GCATTTGCCGATCCGTAAAAATACACACATTTACAGATGGTAAATAATGCGTGAAGAATT 68
                       ************************************************************

consensus_11009#0      ATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAA 128
consensus_11009#3      ATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAA 180
consensus_11009#2      ATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAA 178
consensus_11009#1      ATCTCAGAAATTACATTCTCTTCAGGAACGCAAACGTCTTATGTGTTCTCGTTCGACGAA 128
                       ************************************************************

consensus_11009#0      GATCCGAAAAGTTGAATTAAAAAGGAAAATAATTAACGATGGTTAGTAATTTCTAAGTAT 188
consensus_11009#3      GATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATG------------------- 221
consensus_11009#2      GATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATG------------------- 219
consensus_11009#1      GATCCGAGAAGTTGAATTAAAAAGGAAAATAATTAACGATG------------------- 169
                       ******* *********************************                   

consensus_11009#0      AATGACTAGAGCTGTTCACATATAGTTCTAGAAATTGTGCCAAAATCATCAGCGACTGCT 248
consensus_11009#3      -------------------------TTCTAGAAATTGTGCCAAAATCATCAGCGGCTGCT 256
consensus_11009#2      -------------------------TTCTAGAAATTGTGCCAAAATCATCGGCGGCTGCT 254
consensus_11009#1      -------------------------TTCTAGAAATTGTGCCAAAATCATCAGCGACTGCT 204
                                                ************************* *** *****

consensus_11009#0      GCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG 308
consensus_11009#3      GCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG 316
consensus_11009#2      GCATGCCTCCGTGAAATTGAATTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG 314
consensus_11009#1      GCATGCCTCCGTGAAATTGAGTTCGAGATAAATAAACAAGATATAACTGTACGACCTTGG 264
                       ******************** ***************************************

consensus_11009#0      AAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGACTCCCC-----TCT 363
consensus_11009#3      AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACTCCCC-----TCT 371
consensus_11009#2      AAAAAAAGAAAACTGATGAAGTCAATAGATTCTACAAATAAAACGACACACC-----TTA 369
consensus_11009#1      AAAAAAAGAAAACTGGTGAAGTCAATAGATTCTACAAATAAAACGATAAATCAGATACTC 324
                       *************** ******************************     *        

consensus_11009#0      CTTCAGTTGTTTTGAACCCATCTACTTCTAAAGATCTAAGTCGTATTCATGCCGAAAGTT 423
consensus_11009#3      CTTCAGTTGTTTTGAACCCATCTACT---------------------------------- 397
consensus_11009#2      TATTGAGTATCT-GACCTTCGCAACATGGGATTTTGTA---------------------- 406
consensus_11009#1      CATCCATTGTCA-GTGCCTGTTTACTAAACTAACTGTATGACTTTTCTTATCCAGACTCC 383
                         *    * *   *  *      **                                   

consensus_11009#0      TACATAAAGGCACTTTAGAATGGCGTTTGAACCACGCAATCGACAATGGACAGATTGACC 483
consensus_11009#3      ------------------------------------------------------------
consensus_11009#2      ------------------------------------------------------------
consensus_11009#1      CCTCTCTTCAGTTGTTTTGAACCCATCTACT----------------------------- 414
                                                                                   

consensus_11009#0      TANCAGAAAAGATAAGTGACTCTATTGGAGATCGTTTGTTTTCTACAACTTCCGACAAAA 543
consensus_11009#3      ------------------------------------------------------------
consensus_11009#2      ------------------------------------------------------------
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      ATATTCATTTGACTTTGGGCAAGCAAGATGAATACAAAGAGGAATTAAAAAATCGGCGAC 603
consensus_11009#3      ------------------------------------------------------------
consensus_11009#2      ------------------------------------------------------------
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CTGTTTG 610
consensus_11009#3      -------
consensus_11009#2      -------
consensus_11009#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)