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Schistosoma mansoni
cluster # 11013 cluster # 11013       Sequences # 28       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11013#0 length = 591 sequences # 26  
consensus_11013#1 length = 435 sequences # 1  
consensus_11013#2 length = 377 sequences # 1  

consensusID : consensus_11013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 591
fasta sequence
                              [TCTCTTGTGATGA-TTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACC-ATCCTCATCCTCTTG-GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC-TGGAATTCCATCACCG-TCCCTGTCGATATGTTT-CGGTAATTTGATTGCTCTCTTGTGATGAC-TTGT-TTCGAGGTAATTGGGAATACCATCCC-CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA-TCCTCATC-CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA-TGGTCTGGAATTCCATCACCGTCCCTG-TCGATA-TGTTTCGGTAAT-TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA-TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTC-TCGATA-TGTTTCGGTAAA-TTGATTGCTCTCTTGTGATGACTTGTTCCGAGG]

[+] EMBL CD065799             [TCTCTTGTGATGA TTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACC ATCCTCATCCTCTTGTGTGATCAGGGATACCGTCACCATCAAAATCAACCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATTCCGTTACCATCAGACTCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCTATT TGTTGCGGTAATCCGGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATTCCG                                                                                                         ]
[+] EMBL CD065858             [ CTCTTGTGATGA CTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTATATAGTCTGGAATACCGTCACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAAAATCAACCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTATATTCTCTGGTCTTCCTTCAGCATTCGTCATC CTCTTGGTGATCAGCGATACCGTCAGCATCAAATTCAACCTCTATAGTCGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTATATTCTCTGGAATTC                                                                                                                                               ]
[-] EMBL CD065825             [    TTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCAATCGGCATCCTCATG CTGATCAGGGATACCGTCAGCATCAGAATCACCCTCTAGATGGTCATGGAAGACCATCGCCGATTCCTCTCAAGAGATTG CGGTAATTCGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCGTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCAATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTACGAGGTAATTTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTT GTGATCA GGATACCGTCAg                                                                                                     ]
[+] EMBL CD187950             [                       GGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCAGCA TCCTCATC CTCTTGGTGATCAG                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD187943             [                       GGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATACCGTCACCA TTCTCATC CTCTTGGTGATCAGGGATA                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD062496             [                                          gCCATCATCGTCCTCTAGATAGTCTGGAATTCCGCCA C ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTTATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATG TGTGTCGG                                                                                                                                                                                                                                       ]
[+] EMBL CD086474             [                                                                 CTGGAATTCCGTCACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG CCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTA                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD084797             [                                                                          caTCACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCCG TCGATACTGTTTCGGTAAT TGGATTGCTC                                                                                                                                                                                                                        ]
[-] EMBL CD084762             [                                                                              ACC ATCCTCATCCTCTTG GTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGTCTTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCCGATCGATAc                                                                                                                                                                                                                                               ]
[-] EMBL CD084792             [                                                                                         TCCTCTTG GTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCCATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTC ACGATACTGTTTCGGTAAA TTGATa                           ]
[-] EMBL CD084768             [                                                                                                   TGATCAGCGATACCCTCACCATCAGCATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTCT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTCGTCGATA TGTTTCGGTAAT TTGAT                            ]
[-] EMBL CD084777             [                                                                                                    GATCAGGGATACCGTCACCATCAGCATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTCT CTCGAGGTAATTGGGAACACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAATTTGAT                            ]
[-] EMBL CD167542             [                                                                                                        AGGCATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATCTCT TTGGTGATCAAGGATACCGTCACCATCAG ATCACggta                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD187970             [                                                                                                            ATACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTC                                                                                                                                                                   ]
[-] EMBL CD065806             [                                                                                                             TACCGTCACCATCAGAATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCCACATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCACCAGAATCACCCTCTAGA TGGTGTGGAATTCCATCACCGTACCTG TC                                                                                                                                                                                                                                                    ]
[-] EMBL CD084730             [                                                                                                               CCGTCACCATCAGCATCACCCTCTAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TCGA TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGT CCTCGTCGATA TGTTTCGGTAAA TTGATTGCTC                       ]
[-] EMBL CD086970             [                                                                                                                CGTCACCATCAGAATCACCCTATAGATGGTC TGGAATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGCGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTGTAGATAGTGTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAAT                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD084711             [                                                                                                                              TCACCCTCTAGATGGTC TGGAATTCCATCACCG TGCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGACTTTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATACTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGCATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTACCCG TCGATA TGTTTCGG                                      ]
[-] EMBL CD086975             [                                                                                                                              caACCTTTTAGATGGTC TGGAATTCCATCACCG TCCCTGTAGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGGGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAAT                                                                                            ]
[+] EMBL CD065814             [                                                                                                                               ccCCCTCTAGATGGTC TGGAA TCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCT                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD084745             [                                                                                                                                         ATGGTC   G ATTCCATCACCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTCCGAGGTAA TGGGGAATACCATCCCCATCATCGTCCTCTAGATTGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACAGTCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTCCGAGG]
[+] EMBL CD084773             [                                                                                                                                          TGGTC TGGAATTCCATCATCG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA TGGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGA                                                                                                                                                   ]
[+] EMBL CD065794             [                                                                                                                                                      TCCATCACCG TCCCTGTCGATATGTTTCCGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGG                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD084731             [                                                                                                                                                              CG TCCCTGTCGATATGTTT CGGTAATTTGATTGCTCTCTTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATGCCGTCACCA TCCTCATC CTCTTGGTGATCAGTGATACCGTCAGCA                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD167539             [                                                                                                                                                                                                      TTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCG TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTCATGACTTGTTTCGAGGTAA TTGGGAATACCATCCCCATCATCGTCCTCTAGATA                                                                                                                                                          ]
[-] EMBL CD065842             [                                                                                                                                                                                                      TTGTGATGAC TTGT TTCGAGGTAATTGGGAATACCATCCC CATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCA TCCTCATC CTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGA TGGTCTGGAATTCCATCACCGTCCCTG TCGATA TGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAA GTGGG ATACCATCCCCATCATCGTCC                                                                                                                                                                  ]


>consensus_11013#0 TCTCTTGTGATGATTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGA TAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCA GAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAAT TTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCG TCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCG TCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGT TTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCC CCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCA GGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTC TCGATATGTTTCGGTAAATTGATTGCTCTCTTGTGATGACTTGTTCCGAGG



consensusID : consensus_11013#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [TCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGACGTCATTGTGAACCCAATCCCCATGATGGTCATCTACAGAGTGTGCCAAGCTGTCACGATCGTAGTCCTATTGGAGAGCAGGCACCCCGTATCCATCAGCATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTGTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATATGATTGCTCTNTGG]

[-] EMBL CD128910             [TCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGACGTCATTGTGAACCCAATCCCCATGATGGTCATCTACAGAGTGTGCCAAGCTGTCACGATCGTAGTCCTATTGGAGAGCAGGCACCCCGTATCCATCAGCATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTGTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATATGATTGCTCTNTGG]


>consensus_11013#1 TCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGA TGACTTGTTTCGACGTCATTGTGAACCCAATCCCCATGATGGTCATCTACAGAGTGTGCC AAGCTGTCACGATCGTAGTCCTATTGGAGAGCAGGCACCCCGTATCCATCAGCATCACCC TCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCT CTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGA TAGTGTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCA GAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAAT ATGATTGCTCTNTGG



consensusID : consensus_11013#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 377
fasta sequence
                              [TCACCCTCTAGATGGTTTGGTTTCAACAGCGTCCCTATGAACACGTTTCGCGCCAAGATATTTATCTGACACTATCGAATATCTCAGGTTATGCAGCATACGATCCGGGTGCTCGTCCACAAGATAGTCTGGCAGTCGGTCACGAACTCAATCCTCATGATGATAAGGGAGACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGAGGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAAT]

[-] EMBL CD098325             [TCACCCTCTAGATGGTTTGGTTTCAACAGCGTCCCTATGAACACGTTTCGCGCCAAGATATTTATCTGACACTATCGAATATCTCAGGTTATGCAGCATACGATCCGGGTGCTCGTCCACAAGATAGTCTGGCAGTCGGTCACGAACTCAATCCTCATGATGATAAGGGAGACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGGTAATTTGATTGCTCTCTTGTGAGGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCAGAAT]


>consensus_11013#2 TCACCCTCTAGATGGTTTGGTTTCAACAGCGTCCCTATGAACACGTTTCGCGCCAAGATA TTTATCTGACACTATCGAATATCTCAGGTTATGCAGCATACGATCCGGGTGCTCGTCCAC AAGATAGTCTGGCAGTCGGTCACGAACTCAATCCTCATGATGATAAGGGAGACCGTCACC ATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCGG TAATTTGATTGCTCTCTTGTGAGGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATC ATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGAT ACCGTCACCATCAGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11013#0      TCTCTTGTGATGATTGTTTCGAGGTAATTGGGAATACCATCCCCATCATCGTCCTCTAGA 60
consensus_11013#1      ------------------------------------------------------------
consensus_11013#2      ------------------------------------------------------------
                                                                                   

consensus_11013#0      TAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACCGTCACCATCA 120
consensus_11013#1      ------------------------------------------------------------
consensus_11013#2      ------------------------------------------------------------
                                                                                   

consensus_11013#0      GAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCG-GTAA 179
consensus_11013#1      ------------------TCTGGAATTCCATCACCGTCCCTGTCGATATGTTTCG-GTAA 41
consensus_11013#2      ---TCACCCTCTAGATGGTTTGG--TTTCAACAGCGTCCCTATGAACACGTTTCGCGCCA 55
                                         * ***  ** ** ** ******* *  * * ****** *  *

consensus_11013#0      TTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATCCCCATCATC 239
consensus_11013#1      TTTGATTGCTCTCTTGTGATGACTTGTTTCGACGTCATTGTGAACCCAATCCCCATGATG 101
consensus_11013#2      AGATATTTATCTGACACTATCGAATATCTC-AGGTTATGCAGCATACGATCCGGGTGCTC 114
                           ***  ***      **    * * ** * ** **   * *  * ****   *  * 

consensus_11013#0      GTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATCAGGGATACC 299
consensus_11013#1      GTCATCTACAGAGTGTGCCAAGCTGTCACGATCGTAGTCCTATTGGAGAGCAGGCACCCC 161
consensus_11013#2      GTCCACAAGATAGTCTGGCAGTCGGTCACGAACTCAATCCTCATGATGATAAGGGAGACC 174
                       ***  * * * *** **  *  * ***** * *    ****  **  **  *** *  **

consensus_11013#0      GTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATG 359
consensus_11013#1      GTATCCATCAGCATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATG 221
consensus_11013#2      GTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCTGTCGATATG 234
                       **  ******* ************************************************

consensus_11013#0      TTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATC 419
consensus_11013#1      TTTCGGTAATTTGATTGCTCTCTTGTGATGACTTGTTTCGAGGTAATTGGGAATACCATC 281
consensus_11013#2      TTTCGGTAATTTGATTGCTCTCTTGTGAGGACTTGTTTCGAGGTAATTGGGAATACCATC 294
                       **************************** *******************************

consensus_11013#0      CCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATC 479
consensus_11013#1      CCCATCATCGTCCTCTAGATAGTGTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATC 341
consensus_11013#2      CCCATCATCGTCCTCTAGATAGTCTGGAATTCCGTCACCATCCTCATCCTCTTGGTGATC 354
                       *********************** ************************************

consensus_11013#0      AGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCT 539
consensus_11013#1      AGGGATACCGTCACCATCAGAATCACCCTCTAGATGGTCTGGAATTCCATCACCGTCCCT 401
consensus_11013#2      AGGGATACCGTCACCATCAGAAT------------------------------------- 377
                       ***********************                                     

consensus_11013#0      CTCGATATGTTTCGGTAAATTGATTGCTCTCTTGTGATGACTTGTTCCGAGG 591
consensus_11013#1      GTCGATATGTTTCGGTAATATGATTGCTCTNTGG------------------ 435
consensus_11013#2      ----------------------------------------------------
                                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)