These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11017#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 24 consensus length = 1139 fasta sequence [TAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGTAGGAGGAGTAGTGGCAGTAGTAGTGGTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGACCCATATTATCACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGCGACTTCACCGGAAACTGTTGTAATATTGGTATTAATCACAGTATTTGTTGAATGTTCAATGTGGGCACGGTTGAGTACTTTCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCACAAAAGTGTAGAAATATATATAACAGAAAAAGAAAAACTAATGACCATTATCAATATCAAAAATATAGGGAGGGATTATAAAATGGATGTTTTCACAATTCATGTATACCAAAAAGTATACTACAACAGGTAGGCGGTACCTTAGTAATTTAAAAACACAAGCTTCCAAAGTTGAGTCATTCACTGATTTTATGACAGTCTGGAAAGCCGATTAGTATTTCTAGCCTTAAAAGCACCAATGTACAAACCTATACTTGAATAATGGAAATAATTCAAACACACAGGAATGTATCTATCGGTGAATAATGTAAAACAAACATAGTACGTATGCTGTTTCATTNTGAAGATTTCATANAAATATTATTGAAACCATGAACCGATCTAAGNTAGACAATCATCGAAAACTTGAGGTGACTTGATGGCTATTTCGT] [-] EMBL CD114387 [TAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGTAGGAGGAGTAGTGGCAGTAGTAGTGGTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAACAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTC ] [-] EMBL CD195221 [ GTGGTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCACCAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGACC ] [+] EMBL CD071826 [ GTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGAATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD071833 [ GTAGTATTAGCAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGAATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD071831 [ GTAGTATTAGCAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGAATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD071850 [ GTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [-] EMBL CD114479 [ TAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGCAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAGATCTCTACTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAACGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTC ] [+] EMBL CD196737 [ TAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGACCCATATTATCACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGCGACTTCACCGGAAACTGTTGTAATATTGGTATTAATCACAGTATTTGTT ] [+] EMBL CD195369 [ AGTAGCAGTAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTGCGCATTGGTCCACCCAT ] [-] EMBL CD071817 [ TAGTAGGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTC ] [-] EMBL CD195261 [ GGAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCTATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGACC ] [+] EMBL CD069417 [ AGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAGATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAACATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATAGTTCGACCCATATTATCACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGCGACTTCACCGG ] [+] EMBL CD088261 [ AGTAGTAGTAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATTTCGTTGAAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [-] EMBL CD071861 [ TAGTAGTAGTAGTAGTAGGAGTAGTAGCAATATTACGAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTGCGCATTGTTC ] [+] EMBL CD195062 [ AGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGAC ] [+] EMBL CD071866 [ GCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAACAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAGTCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD071860 [ GCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAACAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAGTCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD167888 [ GTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGACCCATATTATCACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGCGACTTCACCGGAAACTGTTGTAATATTGGTATTAATCACAGTATTTGTTGAATGTTCAATGTGGGCACGGTTGAGTACTTTCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCACAAAAGT ] [+] EMBL CD069262 [ ctgAGTACGAGGAGAAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCACTGTTCGACCCATATTATCACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGCGACTTCACCGGAAACTGTTGTAATATTGGTATTAATCACAGTATTTGTTGAATGTTCAATGTGGGCACGGTTGAGTACTTTCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCATATAAGCTT ] [+] EMBL CD195024 [ AGTAGTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAGTGGTAATAATACAGATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAGTTGATTGATTGAAAATATTAGCCTGTACGCATTGTTCGAC ] [+] EMBL CD071838 [ GTAGCAATATTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAACAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [+] EMBL CD071856 [ GTAGCAATACTACAAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAACAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT ] [-] EMBL CD071845 [ AAAATATCGTTGTAACTATTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAATCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACAGCAACAACAACAGAATAATGGTAATAATACAAATAGTAAAGGAAACTAACGTTGAAAGAATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTTC ] [+] EMBL CD153942 [ TCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCACTAGGATGTAGAAATATATATAACAGAAAAAGAAAAACTAATGACCATTATCAATATCAAAAATATAGGGAGGGATTATAAAATGGATGTTTTCACAATTCATGTATACCAAAAAGTATACTACAACAGGTAGGCGGTACCTTAGTAATTTAAAAACACAAGCTTCCAAAGTTGAGTCATTCACTGATTTTATGACAGTCTGGAAAGCCGATTAGTATTTCTAGCCTTAAAAGCACCAATGTACAAACCTATACTTGAATAATGGAAATAATTCAAACACACAGGAATGTATCTATCGGTGAATAATGTAAAACAAACATAGTACGTATGCTGTTTCATTNTGAAGATTTCATANAAATATTATTGAAACCATGAACCGATCTAAGNTAGACAATCATCGAAAACTTGAGGTGACTTGATGGCTATTTCGT] consensusID : consensus_11017#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 880 fasta sequence [GTAATATTGGTATTAATCACAGTATGTGTTGAATGTTCAATGTGCGCACGGTTGAGTACTTTCAAGAATTCCTCTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCTCAAAAGTAATGTACGCAACTGAATCACTGATAACTGCATCAGTTCCCTGTAATTCTTTTGGTGGAACACGATGAGAATACAATACTTGGGGTGCTCGATCAAGACGTCTTCTTACCTCAGTGAACTCTTGCATAAAAACTTTTCCAATTAACAAATCATCTGGATCTTTAAATGTTGTACTAAAGATAACTGTAACTCGATCAGCTAATGCTTGTACATACATTGTTTCATCGTCTCTATAATGTATCACCGCCCTCTTAGAACCCGAATCCGCGTTAGATTTAATTTGATATTCGAAAAACTTCTCAAAAACAGCTGCCATACAATTTCTTTTTAAAAGACCACATTTGTGAGCTAATTGATTATGATCAGAAGGTAGTTTTTCTAAATCTATGCATAAGGTTACACTTTGATTGGGCTCTGCTGAAGAAAGAAAGTCACCATACTCACGAGCCAATACTTCATTTACCCCATGTTCTTTCAGTTCATGAAAGAATTTAATGAATATACTGACAAGAATCTTTTTCTTATCATTATTTGGATTACTTATGGTGTAAACAATACTATCGAAGTCCGCAACGGTGTAATCAATTTTATCATATCTGGATTCCTCTTTTGCCTGTTCAAATCTCGTGACTAGAATTTCTTCTACAGCTCTGTTACAAACTT] [-] EMBL AI977493 [GTAATATTGGTATTAATCACAGTATGTGTTGAATGTTCAATGTGCGCACGGTTGAGTACTTTCAAGAATTCCTCTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCTCAAAAGTAATGTACGCAACTGAATCACTGATAACTGCATCAGTTCCCTGTAATTCTTTTGGTGGAACACGATGAGAATACAATACTTGGGGTGCTCGATCAAGACGTCTTCTTACCTCAGTGAACTCTTGCATAAAAACTTTTCCAATTAACAAATCATCTGGATCTTTAAATGTTGTACTAAAGATAACTGTAACTCGATCAGCTAATGCTTGTACATACATTGTTTCATCGTCTCTATAATGTATCACC ] [-] EMBL CD164350 [ TTTCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCATATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAGATCGATGGTGGAATTATGCGCAGATTCAGTGGATAAATGACGCGGAAAAAGCACAAAAGTAATGTACGCAACTGAATCACTGATAACTGCATCAGTTCCCTGTAATTCTTTTGGTGGAACACGATGAGAATAC ATACTTGGGGTGCTCGATC AGACGTCT ] [-] EMBL AI977429 [ GATCTTTAAATGTTGTACTAAAGATAACTGTAACTCGATCAGCTAATGCTTGTACATACATTGTTTCATCGTCTCTATAATGTATCACCGCCCTCTTAGAACCCGAATCCGCGTTAGATTTAATTTGATATTCGAAAAACTTCTCAAAAACAGCTGCCATACAATTTCTTTTTAAAAGACCACATTTGTGAGCTAATTGATTATGATCAGAAGGTAGTTTTTCTAAATCTATGCATAAGGTTACACTTTGATTGGGCTCTGCTGAAGAAAGAAAGTCACCATACTCACGAGCCAATACTTCATTTACCCCATGTTCTTTCAGTTCATGAAAGAATTTAATGAATATACTGACAAGAATCTTTTTCTTATCATTATTTGGATTACTTATGGTGTAAACAATACTATCGAAGTCCGCAACGGTGTAATCAATTTTATCATATCTGGATTCCTCTTTTGCCTGTTCAAATCTCGTGACTAGAATTTCTTCTACAGCTCTGTTACAAACTT] consensusID : consensus_11017#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 520 fasta sequence [CCAAATTCTCTGTGCGTTTGGAAGATTATTATTATTGTTAAAATTATTAAAATACAAAGATGTGTGAATAATATGTAAGGTAAATTCAAGTTGTGAAAATACTAAAGGGAAGACTGTGTAGATTCACTAGTAAAATTAGATTGTCTGGTTATTAAGATTACTATTCACGCATCAGGCCTGAGATTAGCCAAGATACAAGAAGCGGTTCAATATACATCGTTTACACACTGACTACAGTTTTTAAAACCGTCTGATTATTCCCTCTGTCGTCCGACAAATTTTCTTCAGACATTTAAAAGTACGATATTTCTTTATATTACTTTTGGAGCATACTCGATTGAAATTTTTCTTTCAAGTTATGTGAATAGATTTACTTTTGTTAAGCAAGCACAGCGAGCATTGTGTGGTAAAGTAAATTCATTTCATTTCCTTTACTATTTGTATTACTACCATTATTCTGTTGTTGTTGCTGTTGTTATTTTCTACTCTATTCACTTTGATATTTTGTTGTTTATTTTTT] [+] EMBL CD194893 [CCAAATTCTCTGTGCGTTTGGAAGATTATTATTATTGTTAAAATTATTAAAATACAAAGATGTGTGAATAATATGTAAGGTAAATTCAAGTTGTGAAAATACTAAAGGGAAGACTGTGTAGATTCACTAGTAAAATTAGATTGTCTGGTTATTAAGATTACTATTCACGCATCAGGCCTGAGATTAGCCAAGATACAAGAAGCGGTTCAATATACATCGTTTACACACTGACTACAGTTTTTAAAACCGTCTGATTATTCCCTCTGTCGTCCGACAAATTTTCTTCAGACATTTAAAAGTACGATATTTCTTTATATTACTTTTGGAGCATACTCGATTGAAATTTTTCTTTCAAGTTATGTGAATAGATTTACTTTTGTTAAGCAAGCACAGCGAGCATTGTGTGGTAAAGTAAATTCATTTCATTTCCTTTACTATTTGTATTACTACCATTATTCTGTTGTTGTTGCTGTTGTTATTTTCTACTCTATTCACTTTGATATTTTGTTGTTTATTTTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11017#0 TAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAGGAGTAGTAGTAGGAGGAG 60 consensus_11017#1 ------------------------------------------------------------ consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 TAGTGGCAGTAGTAGTGGTAGTAGTAGTAATCGTAGTAGTAGGAGGAGTAGCAGTAGTAG 120 consensus_11017#1 ------------------------------------------------------------ consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 GAGTAGTAGCAGTAGTAGTAGTAGGAGTAGTAGCAATATTACAAAATATCGTTGTAACTA 180 consensus_11017#1 --------------------GTAATATTGGTATTAAT--CACAGTATGT-GTTG-AATGT 36 consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 TTCTTCTGATTTCAATTCATTAATTAATTAACATCTAATTAGTATTAACAATTAAGAAAA 240 consensus_11017#1 TCAATGTGCGCACGGTTGAGTACTT--TCAAGAATTCCTCTGTTTTAGCACGCATACGCA 94 consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 TCTCTATTCTAAAAAATAAACAACAAAATATCAAAGTGAATAGAGTAGAAAATAACAACA 300 consensus_11017#1 TTTGCAT--------ATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCT-TA 145 consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 GCAACAACAACAGAATAATGGTAATAATACAAATAG-TAAAGGAAACTAACGTTGAAAGA 359 consensus_11017#1 ATGTTTGTATTAGATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAA 205 consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 ATGTTTCGTTCCTAAATCAATAAATTGATTGATTGAAAATATTAGCCTGTACGCATTGTT 419 consensus_11017#1 AAAGCTCAAAAGTAATGTACGCAACTGAATCACTGATAACTGCATCAGTTCCCTGTAATT 265 consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 CGACCCATATTAT-CACTTTGTATACCACCGATTTTGTTCATCAATGGTGAAATAGGTGC 478 consensus_11017#1 CTTTTGGTGGAACACGATGAGAATACAAT-ACTTGGGGTGCTCGATCAAGACGTCT-TCT 323 consensus_11017#2 ----------------------------------------------------------CC 2 consensus_11017#0 GACTTCACCGGAAACTGTTGTAATATTGGTATTAATCACAGTATTTGTTGAATGTTCAAT 538 consensus_11017#1 TACCTCAGTGAACTCTTGCATAAAAACTTTTCCAATTAACAAATCATCTGGATCTTTAA- 382 consensus_11017#2 AAATTCTCTGTGCGTT--TGGAAGATTATTATTATTGTTAAAATTATTAAAATACAAAG- 59 * ** * * ** * * * * ** ** * consensus_11017#0 GTGGGCACGGTTGAGTACTTTCAAGAATTCCACTGTTTTAGCACGCATACGCATTTGCAT 598 consensus_11017#1 ------ATGTT---GTACT---AAAGATAACTGTAACTCGATCAGCTAATGCTTGTACAT 430 consensus_11017#2 ------ATGTGTGAATAATATGTAAGGTAAATTCAAGTTG---TGAAAATACTAAAGGGA 110 * * ** * * * * * * * consensus_11017#0 ATAAGCTTTGGAACATTTAATATGATAGTGTAAATAGTTTCTTAATGTTTGTATTAG--- 655 consensus_11017#1 ACATTGTTTC-ATCGTCTC-TATAAT-GTATCACCGCCCTCTTAGAACCCG-----A--- 479 consensus_11017#2 AGACTGTGTAGATTCACTAGTAAAATTAGATTGTCTGGTTATTAAGATTACTATTCACGC 170 * * * * * * ** ** * * *** consensus_11017#0 ATCGATGGTGGAATTACGCGCAGATTCAGTGGATAAATGACGCGGAA-AAAGC-ACAAAA 713 consensus_11017#1 ATCCGCGTTAGATTTAATTTGATATTC----GAAAAACTTCTCAAAA-ACAGCTGCCATA 534 consensus_11017#2 ATCAGGCCTGAGATTA-GCCAAGATAC----AAGAAGCGGTTCAATATACATCGTTTACA 225 *** * *** * ** * * ** * * * * * * * consensus_11017#0 GTGTAGAAATATATATAACAGAAAAAGAAAAACTAATGACCATTATCAATATCAAAAATA 773 consensus_11017#1 CAATTTCTTTTTAAAAGACCACATTTGTGAGCTAATTGATTATGATCAGAAGGTAGTTTT 594 consensus_11017#2 CACTGACTACA---GTTTTTAAAACCGTCTGATTATTC-CCTCTGTCGTCCGACAAATTT 281 * * * * * ** * * consensus_11017#0 TAGGGAGGGAT-TATAAAATGGATGTTTTCAC--AATTCATGTATACCAAAAAGTATACT 830 consensus_11017#1 TCTAAATCTATGCATAAGGTT-ACACTTTGATTGGGCTCTGCTGAAGAAAGAAAGTCACC 653 consensus_11017#2 TCTTCAGACATTTAAAAGTACGATATTTC-------TTTATATTACTTTTGGAGCATACT 334 * * ** * ** * ** * * * ** consensus_11017#0 ACAACAGGTAGGCGGTACCTTAGTAATTTAAAAA-CACAAGCTTCCAAAGTTGAGTCATT 889 consensus_11017#1 ATACTCACGAGCCAATACTTCATTTACCCCATGTTCTTTCAGTTCATGAAAGAATTTAAT 713 consensus_11017#2 -CGATTGAAATTTTTCTTTCAAGTTATGTGAATAGATTTACTTTTGTTAAGCAAGCACAG 393 * * * * * ** * * consensus_11017#0 CACTGATTTTATGACAGTCTGGAAAGCCGATTAGTATTTCTAGCCTTAAAAGCACCAATG 949 consensus_11017#1 GAATATACTGACAAGAATCTTTTT--CTTATCATTATTTGGATTACTTATGGTGTAAACA 771 consensus_11017#2 CGAGCATTGTGTGGTAAAGTAAATT-CATTTCATTTCCTTTACTATTTGTATTACTACCA 452 * * * * * * * * * * consensus_11017#0 -TACAAACCTATACTTGAATAATGGAAATAATTCAAACACACAGGAATGTATCTATCGGT 1008 consensus_11017#1 ATACTATCGAAGTCCGCAACGGTGTAATCAATTTTATCATATCTGGATTCCTCTTTTGCC 831 consensus_11017#2 TTATTCTGTTGTTGTTGC-TGTTGTTATT--TTCTACTCTATTCACTTTGATATTTTGTT 509 ** ** * ** * * * * * * * consensus_11017#0 GAATAATGTAAAACAAACATAGTA-CGTATGCTGTTTCATTNTGAAGATTTCATANAAAT 1067 consensus_11017#1 TGTTCAAATCTCGTGACTAGAATTTCTTCTACAGCTCTGTTACAAACTT----------- 880 consensus_11017#2 GTTTATTTTTT------------------------------------------------- 520 * * consensus_11017#0 ATTATTGAAACCATGAACCGATCTAAGNTAGACAATCATCGAAAACTTGAGGTGACTTGA 1127 consensus_11017#1 ------------------------------------------------------------ consensus_11017#2 ------------------------------------------------------------ consensus_11017#0 TGGCTATTTCGT 1139 consensus_11017#1 ------------ consensus_11017#2 ------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||