These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11026#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1955 fasta sequence [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA-AACAAA-AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC-GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA-TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA-TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATTAGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCCAGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATT-AGCAGAAGATTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATACATCACATATATATGATATGATATCATAGATCGAGTGCTG] [+] EMBL CD096324 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGGTTGTGAAT ] [+] EMBL CD096492 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAta ] [+] EMBL CD096366 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCA ] [+] EMBL CD096470 [CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAAAGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGATCAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAACAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATANAAGTGAAGATATATCTGTGTCANAATATAGGTCTCACCAACTG ] [-] EMBL CD156279 [ TAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAAAGTAAAAAGGTTTATAGTCAAATAANAATTACGGAAGAATTCACAGAGGAGGAGGATTTGATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAA AACAAA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTGGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGACTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCT ] [+] EMBL CD166876 [ GATTTGATGGTTTGTGAA TGGGTGTGCTAACAGATCCGTTCTATGATCAACAATACTTTATCAAGAACAAAGAGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGG ] [+] EMBL CD167468 [ AA AGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAG TCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGCCGGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGGTTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAG ] [+] EMBL AI067925 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATT ] [+] EMBL AI068213 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTACAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAA ] [+] EMBL AI068280 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAA TTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAA CCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAAT ] [+] EMBL AI067415 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATACGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTACAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGATCAACTACGTCAACGAACATTACAATATGAATTACTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACATGA TTATTTGCACCAGTTGCAA ] [+] EMBL AI068043 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTG ] [+] EMBL AI068229 [ GAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTAT ] [+] EMBL AI067496 [ cAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAA TTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAA TTGGTATGCTTACAGAAGAAA CCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCA ] [+] EMBL AI068234 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAA ] [+] EMBL AI067453 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGGACACAAGCAATTCCTATAGAATCAGATCTCGGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAG ] [+] EMBL AI067327 [ TGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCACGAACAGGATTTATTTGCA CAGTT ] [+] EMBL AI068272 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAAGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGA GATGGATTCGACTTGGTGAAGTCAATGAATATGTGGATTTCAATGAC ] [+] EMBL AI067844 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCNGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATG ] [+] EMBL AI067954 [ TGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACAGAAGCAATTCCTATAGAATCAGATCTC GAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCGTGAAGTGGCTAGTCCAAGAACAGGA TTATTTGCACCAGTTGCAATGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGA ] [+] EMBL CD096657 [ TCCAAGAACAGGA TTATTTGCACCAGTTGCAAAGGCAATAAGAAGAGGATGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGG ] [+] EMBL AI976782 [ TGGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTC ] [+] EMBL AW017428 [ GGATTCGACTTGGTGAAGTCAATGAATATGTGGA TCCAATGACCGGAGTTGCTATTCCATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGATAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTGGTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAATTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAGTTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGAACCATCAACTTCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTA ] [+] EMBL AI976851 [ GAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAAAGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATTAGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCCAGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATT AGCAGAAGATTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCAT ] [+] EMBL CD080287 [ gAGGCCAAAAATTCGGCACGAG GTTTATTCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGAAGAAATAGAACCACAACGTTATCTAACAACATCATGTACACCAAATAAAGAACCAGGATCACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGAACATGATGATATTGAAGAAAATTATCATCATCAAACTAATCAATATCATCATGAATCCAATATACCNAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTTATATCATCCATTTAATATAT ] [+] EMBL SMAA69037 [ ATATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTAC TCTAATTTATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATACATCACATATATATGATATGATATCATAGATCGAGTGCTG] consensusID : consensus_11026#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 579 fasta sequence [CGACGGCTCACGGAACTTTATCAAAACAAAAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCGTGGGCTGCTATGAATTGGG] [+] EMBL CD167319 [CGACGGCTCACGGAACTTTATCAAAACAAAAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACTACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGAATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGATGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAG ] [-] EMBL CD062803 [ cacggACCAACTGAATATTTGCTCTAGATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCAATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATCTCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATGCTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTACAATATGAATTATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCGTGGGCTGCTATGAATTGGG] consensusID : consensus_11026#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence [GGGTGTTGGTGATGCTGGAAATGTACTAAAATGTATCTATTTTTTTCTTTTTTAATTCTAAGATAAAGAAATCATGATTGTAAACTATAAAAAGAGTGTAATTTCTCTTTTCGATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGATATTCTTCCCATATTTGTGTTTCACTTGTCCATGAATGTTCATCATTTTCATGTCTTACTTGCATACGTGATGGAATTAATTTATAATCATTATATAATGGTGATGTTATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATATTAAATGGATGATATAAATTAGATGTACTCAAATCTCTAGGTGTAAAA] [+] EMBL CD193004 [GGGTGTTGGTGATGCTGGAAATGTACTAAAATGTATCTATTTTTTTCTTTTTTAATTCTAAGATAAAGAAATCATGATTGTAAACTATAAAAAGAGTGTAATTTCTCTTTTCGATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGATATTCTTCCCATATTTGTGTTTCACTTGTCCATGAATGTTCATCATTTTCATGTCTTACTTGCATACGTGATGGAATTAATTTATAATCATTATATAATGGTGATGTTATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATATTAAATGGATGATATAAATTAGATGTACTCAAATCTCTAGGTGTAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11026#0 CCTACACATATACCAACAGCATCCCAAACAGATCATTACGGAATTTCTATGCAGACTGAA 60 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGACATGAAAAATTCAAAGAGGATATTTTTGAAATTTATCAAAGAAGACTAATAAAAGAT 120 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 CAAATTGCAGAAGCATGGACTCAAGTTGAACAAGATTCATACACAGAATCTCGAATGGAA 180 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 CAAGTTAGTGAACCTATCGACGTAATCGAAGAACGTATCTTGGAGATAACTGAGAAGAAA 240 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGTAAAAAGGTTTATAGTCAAATAAAAATTACGGAAGAATTCACAGAGGAGGAGGATTTG 300 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATTGTTTGTGAATTGGGTGTGCAAACAGATCCGTTCTATGATCAACAATACTTTATCAAA 360 consensus_11026#1 -----------------------------------CGACGGCTCACGGAACTTTATCAAA 25 consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ACAAAAGAAAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACT 420 consensus_11026#1 ACAAAA--AAGTCATTCTTCAATGGACTTACGTGAAGAAAGTTCTAGGCGTTTAAGCACT 83 consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ACGGGTATTCAGACATCAGTAATTCACCTGG-CCAGTATTATCTCTTCAGGTGACTTAGA 479 consensus_11026#1 ACGGGTATTCAGACATCAGTAATTCACCTGGACCAGTATTATCTCTTCAGGTGACTTAGA 143 consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGA 539 consensus_11026#1 ATGGGCTGATGAGGATCTGTGTGAAGTAATTAAGGCAGGCATCAGATTGCTTGGATCTGA 203 consensus_11026#2 ---GGGTGTTGGTGATGCTGGAAATGTACTAAA---ATGTATCTATTTTTTTCTTTTTTA 54 ** ** ** *** * * *** * ** * * *** ** ** * * * consensus_11026#0 TGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTG 599 consensus_11026#1 TGGGCATAAAAGTGAAGATATATCTGTGTCAAAATATAGGTCTCACCAACTGAATATTTG 263 consensus_11026#2 ATTCTAAGATAAAGAAATCATGATTGTAA-ACTATAAAAAGAGTGTAATTTCTCTTTTCG 113 * * * *** ** *** * *** * * * * ** * consensus_11026#0 CTCTA--GATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCA 657 consensus_11026#1 CTCTA--GATTACCAACTGATTCTGGTGAAAAGGTGCTTATCAGTAGCGGCACACAAGCA 321 consensus_11026#2 ATTTATTGATGACCTCTTGCATTATCAGGTGAAATAGTTCTTGATGAAGTCTCTTGA-TA 172 * ** *** *** ** * * * * ** * * * * * * * consensus_11026#0 ATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATC 717 consensus_11026#1 ATTCCTATAGAATCAGATCTCGAGAAAAAGTTCCAGAAGGATTGGCAAGTAGAAGATATC 381 consensus_11026#2 TTCTTCCCATATTTGTGTTTC----ACTTGTCCATGAATGTTCATCATTTTC---ATGTC 225 * * * * * ** * ** * *** * * ** * ** ** consensus_11026#0 TCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATG 777 consensus_11026#1 TCAATTCACGAATCTGCAGAACGCTTCCAATCTGATGATATCGTAGAAAAAGTTGGTATG 441 consensus_11026#2 TTACTT-----GCATACGTGATGGAATTAATTTATAATCATTATATAA--TGGTGATGTT 278 * * ** * * * * *** * ** ** ** * ** * * consensus_11026#0 CTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTA 837 consensus_11026#1 CTTACAGAAGAAACCCACCACATGTCGAAAATTTTAGTTCAACTACGTCAACGAACATTA 501 consensus_11026#2 ATATCAGTTCGAGTACATGATACACTTCTAGTATCAGGTAATATAT-TAAATGGATGATA 337 * *** * ** * * * * * ** * * ** * ** * * ** consensus_11026#0 CAATATGAAT-TATTTGAATCTCAATATTCAACATCATGTATACAATGGAATAATATCCG 896 consensus_11026#1 CAATATGAAT-TATTTGAATCTCAATATTCAACATCATGTAAACAATGGAATAATATCCG 560 consensus_11026#2 TAAATTAGATGTACTCAAATCTCTAGGTGTAAAA-------------------------- 371 ** * ** ** * ****** * * ** * consensus_11026#0 TGAAGTGGCTAGTCCAAGAACAGGATTATTTGCACCAGTTGCAATGGCAATAAGAAGAGG 956 consensus_11026#1 TGGGCTG------CTATGAATTGGG----------------------------------- 579 consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATGGATTCGACTTGGTGAAGTCAATGAATATGTGGATCCAATGACCGGAGTTGCTATTCC 1016 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATTAGAAACGGCTTATCAACAAGGACGTATACGATTAACTAGTTCATCAAGTCATTATGA 1076 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 TAGAAATATTATAACAAATACACCTGTATTACTATTAATTGAACGAGTATACTTTAGTTG 1136 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 GTGCAAAGCTTATTTAACAAGCGTTGTTAATACAGCTACGGGTGAAGTACTATCCCCTAA 1196 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 TTTAGCAATAGCAAATGGTATACTGGAAACAACGGAAGATGAAATACGTTTATTAGATAG 1256 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 TTTAACAAATACATGGATTACTATAGAAGAAGGTGCTGGTCGACAAATAATACAATTAGA 1316 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ACCATCAACTCCCACAACAGAATCTATGGAAGATGAATTAGATGAGCCAGTTAGTTGTAA 1376 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGTTTATCAACTTACTCATGTTTGTCCTGGTGGTGAACCATCTCCTTGGTTAGGTCCATT 1436 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGAAGCTGTACGTTTAGGATTATTAAATTGGGAAACTGGTGAAGTTGCTGCTGATTGGCC 1496 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGCAAGACCAATGTTACGTAGTATGAATTCTACAGGGCATTTATTAGCAGAAGATTTTAT 1556 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 TCCAACTAAATGGTGTAGTTTTCTAACTGCAAAACAAGCTGGTTGGTTAAGATTTATTGA 1616 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 AGAAATAGAACCACAACGTTATCTAACAACATCAGGTACACCAAATAAAGAACCAGGATC 1676 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ACTTATATTATCAACACAAGTAAATCTTTTAGCTCCTTCTCAAGTATCTTTAAATTATGA 1736 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ACATGATGATATTGAAGANAATTATCATCATCAAACTAATCAATATCATCATGAATTCAA 1796 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 TATACCAAGAACTAGATCAGATGATGTTTTTACAACTAGAGATTTGAGTACATCTAATTT 1856 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATATCATCCATTTAATATATTACCTGATACTAGAGTGTATCATGTACTCGATTGATATAC 1916 consensus_11026#1 ------------------------------------------------------------ consensus_11026#2 ------------------------------------------------------------ consensus_11026#0 ATCACATATATATGATATGATATCATAGATCGAGTGCTG 1955 consensus_11026#1 --------------------------------------- consensus_11026#2 --------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||