These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11077#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 26 consensus length = 1271 fasta sequence [CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGG-ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT--AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG-CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT-GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG-GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA-GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG-AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC---CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT] [+] EMBL CD079785 [CTCCNAGGCCANAATTTGGCACGAGGTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCANGAGGAACTTGCACTTGC ] [+] EMBL CD080789 [ TTTGCACGAGGTGACTT AAAAAATAGTTGG ATACCAGGCTTTGCCATCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGATGGGAT ATCATCAGGAGGAACTTGCACTTGCT ] [+] EMBL CD178505 [ aggTCGTTGATTTCAAAA TTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTA ] [+] EMBL CD185751 [ gTCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCT CAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGG ] [+] EMBL CD098390 [ TCGTTGATTTCAAAAAATAGTTGGCATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGA ] [+] EMBL CD178913 [ TCGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACCCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGT ] [-] EMBL CD189844 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ] [-] EMBL CD189863 [ CGTTGATTTCAAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGCAGGACAgattct ] [+] EMBL CD179029 [ AAAAAATAGTTGG ATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTCGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTATAACTCCTTTCTTACGCATTAAATCCTTCC ] [+] EMBL CD079306 [ TTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGn ] [-] EMBL CD190858 [ CGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCA ATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCT ] [+] EMBL CD112047 [ ACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT AAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAagg ] [-] EMBL CD130493 [ GGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ] [+] EMBL CD069774 [ ATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTACACCA GAGCA ] [+] EMBL CD083862 [ gGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACT ] [-] EMBL CD066487 [ ATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ] [-] EMBL CD130462 [ AGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCCTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGC ] [-] EMBL CD066697 [ GTTTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAG ] [-] EMBL CD074043 [ CAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTG CAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ] [-] EMBL CD073586 [ ATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGNCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAAC ] [+] EMBL BG931454 [ aTCTTACTCCATGTGGACGTCGCCGACTAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGAC CCCCAatccatca ] [-] EMBL BF936555 [ TAATCGTCGTTGTAAATGACACGTTGAT GGATAATCATCAGGAGGAACTTGCACTTGCTTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGGACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTTTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT] [-] EMBL CD141679 [ TTTGTACTCCTGCATCACTTAACCATTGNCTATGGACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTG GCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCTTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAG ] [-] EMBL AI395137 [ ctGTAATGAGCCCA TTAT CTTCTCAGTTTGTATGCAATAAG ATATGCCGTTGCGTTG AATTAAGAGGTTACTGGGTCTTGAAGTTCCACCAGGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATGTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ] [-] EMBL AI395098 [ CCA GAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTGCTTATTATTGGATAGAAACGTAATAATTCTGAAATATAAAACTAATCAGTGAAAAAAAAAAAAAAAA ] [-] EMBL CD195613 [ CTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAG AAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATAGCGGGTCACTAGAT ] consensusID : consensus_11077#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 653 fasta sequence [TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG] [-] EMBL CD188638 [TCGTTATTTCAAAAAATAGTTGGATACCAGGCTTTGCCANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTAGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACGCATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGTTATTAGTCATGGCGGTGCAGG] [+] EMBL CD177868 [ acgacctgTGTTTTAGAAAAAACTCACTCCACGAGAGTGTTTAAAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATTAGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCTTTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCGTGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCc ] [+] EMBL CD077472 [ CTCCCAAGTAGGACATTTGTATGTCAGAAATTTGCGTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGGCACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCA ] consensusID : consensus_11077#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence [TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG] [+] EMBL CD139879 [TGTTTCCTGGTGTTTAGAATATGCCGTTGGCTGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTTTACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGG] consensusID : consensus_11077#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 234 fasta sequence [TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC] [+] EMBL CD097845 [TCGTTGATTTCAAAAGTAAGGGTCTGTAGTGAGAATAGTTGGATACCAGGCTTTGCCAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACTATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATAAAAAACTCACTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAGTGCGCATCACTCAGGCACGCTTTTTACCGTTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11077#1 ----------------------TCGTT-ATTTCAAAAAATAGTTGGATACCAGGCTTTGC 37 consensus_11077#3 -TCGTTGATTTCAAA--AGTAAGGGTC-TGTAGTGAGAATAGTTGGATACCAGGCTTTGC 56 consensus_11077#0 CTCCNAGGCCANAATTTGGCACTCGTTGATTTCAAAAAATAGTTGGATACCAGGCTTTGC 60 consensus_11077#2 ------------------------------------TGTTTCCTGGTGTTTAGAATATGC 24 * *** ** * *** consensus_11077#1 CANCCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGA-GAACAGAAGGCGGATTTACT 96 consensus_11077#3 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 116 consensus_11077#0 CAACCAGCTTACGTGGATGAAAGAAAAAGGACCTTGTGAAGAACAGAAGGCGGATTTACT 120 consensus_11077#2 C-GTTGGCTGAAATTAA-GAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTT 82 * *** * * * ** * ** *** * ** ** * * * consensus_11077#1 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGATGTATGTCCTGTTAAATCACAGCATGT 156 consensus_11077#3 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 150 consensus_11077#0 ATTCTGTTTACTACGTAGTTCTTGTTGTCAAGAT-------------------------- 154 consensus_11077#2 TGTTGGTTTTACTCGTGGTTCTC-CAGAAAAGCTGT----------------TGCCATAC 125 * **** *** ***** * *** * consensus_11077#1 TTTAGAAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 212 consensus_11077#3 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 201 consensus_11077#0 -----AAAAAACTCA----CTCCACGAGAGTGTTTAGAACGCGAGAACTTTCCTCGTGAG 205 consensus_11077#2 ATTGAAGAACGCTTATTGACTTTTTCTTGATATTTCGT-CGTTTAGACTTTCCCTATTTT 184 * ** ** * ** * *** * ** ******* * consensus_11077#1 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 272 consensus_11077#3 TGCGCATCACTCAGGCACGCTTTTTACCGTTGC--------------------------- 234 consensus_11077#0 TGCGCATCACTCAGGCACGCTTTTTACCGTTGCTGTCTCCAACCAGTAGATAAAAAGATT 265 consensus_11077#2 TCTATATTATTCTAGTACCCTCCTATATTTTGTTCCCTTTGGTTTTTACGCCAACGTATA 244 * ** * ** * ** ** * *** consensus_11077#1 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 332 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 AGGTTGTCTGGTCATAAATATATCACTCCCAAGTAGGACATTTGTATGTCAGAAATTTGC 325 consensus_11077#2 GATTATCTATATTTGATGTCGTGTCATTAGATTTCAGTTTCGAGACCCTCATGTAAATTC 304 consensus_11077#1 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 392 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 GTGTTTTATGAGTACCGTTTGCTGATCTTAAGAAATGGCTGTTGCATTCGTCACTGTTGG 385 consensus_11077#2 GGG--------------------------------------------------------- 307 consensus_11077#1 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 452 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 CACGACTTCATTTGATGGGCTGATCAATGAGGTCAATAAAGTCGAATTCCATGAAGGTCT 445 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 512 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TTCAAGATTGGGATATAAAGATCTGATCATACAATATGGAAGTGGATCTGTCATACCTCG 505 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 572 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TGTTCCGGAAGACATTTGTACCGAAAGTACTGAACACTTGTCTACAACTCCCTTCTTACG 565 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 632 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 CATTAAATCCTTCCGATACAAAGATTCCCTTGTTGATGAGTTTCAAAGGGCATCATTAGT 625 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 TATTAGTCATGGCGGTGCAGG--------------------------------------- 653 consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TATTAGTCATGGCGGTGCAGGCACTTGTATCCAGGCTCTTACTCCATGTGGACGTCGCCG 685 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 ACTAATCGTCGTTGTAAATGACACGTTGATGGATAATCATCAGGAGGAACTTGCACTTGC 745 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TTTGTTGCAAGGAAAACATGCTTTAGTTTGTACTCCTGCATCACTTAACCATTTGCTATG 805 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 GACAGGTAATGAGTCCACTTATCCTTCTCAGTTTGTATGCAATAAGAATATGCCGTTGGC 865 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TGAAATTAAGAGGTTACTGGGTCCTGAAGTTCCACCAGAGCAAGCTGGCTTTGTTGGTTT 925 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TACTCGTGGTTCTCCAGAAAAGCTGTTGCCATACATTGAAGAACGCTTATTGGCTTTTTC 985 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TTGATATTTCGTCGTTTAGACTTTCCCTATTTTTCTATATTATTCTAGTACCCTCCTATA 1045 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TTTTGTTCCCTTTGGTTTTTACGCCAACGTATAGATTATCTATATTTGATGTCGTGTCAT 1105 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 TAGATTTCAGTTTCGAGACCCTCATGTAAATTCGGGCTGCTTCAAAGTCTAAATTCTTTG 1165 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ------------------------------------------------------------ consensus_11077#3 ------------------------------------------------------------ consensus_11077#0 CTTATTATTGGATAGAAACGTAATAATTATGAAATATAAAACTAATCAGTGAAAAAAAAA 1225 consensus_11077#2 ------------------------------------------------------------ consensus_11077#1 ---------------------------------------------- consensus_11077#3 ---------------------------------------------- consensus_11077#0 AAAAAAAAAAAAAAAAAAACATGGCAGCTGCATTACCGTACTGCGT 1271 consensus_11077#2 ---------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||