These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11085#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 31 consensus length = 1968 fasta sequence [CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC-AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAATGATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAAGCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGCATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA-TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG-CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC-TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC-AAAAAAACCCATTCAAGTTATAGTTTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG-TCACAATTTCTTGCTTT-CTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCTATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT] [+] EMBL CD193710 [CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAA ] [+] EMBL CD193720 [CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACtatcggttc ] [-] EMBL CD193750 [ ATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGAC ] [-] EMBL CD193642 [ ATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCG ] [+] EMBL CD184088 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCGCAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ] [+] EMBL CD184041 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ] [+] EMBL CD184012 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCGCAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ] [+] EMBL CD183965 [ TGCTTCCAGTACTTCGTCTCATCCTAATCATCAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGT ] [+] EMBL AI977694 [ AACACTGACTCCAGCCACAACAACTAATATACCAACTAAAGGGATAATAATTCCTATTGCGTCTACTAATCCTAATCCATTGTTAGTCCCATGTACGGGTGGTGCTTC AGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGG ] [-] EMBL CD161039 [ CGGG GG GGTTCAAGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAATGTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGGCATACAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGGACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGTTCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACTTCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAA ] [-] EMBL CD160626 [ GGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCTGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTA ] [+] EMBL CD184405 [ GGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAATGATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAAGCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGC ] [-] EMBL CD128002 [ ACACAAAGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGCATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAGAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCGAAGGCAATCATAAATTAAGAAAAAAAACAT ] [+] EMBL CD135490 [ GAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTT ] [-] EMBL CD135568 [ AGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTCGCAGAACTTTTGCGTAACATATATACGGCACAAGTTGCTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGATGATAGTGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTCATAATGCTCCATGCTCATGATGTGTGCGAAATTGAAGGACTATGAACAGCTAGTTCGACATCGACCACGTATACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACCCCCTCTTCGATGTTG ] [+] EMBL CD070125 [ GAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGANACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTANATGAGTGCTTTCGAAG ] [+] EMBL CD198794 [ GAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGANAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGANACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTANATGAGTGCTTTCGAAGTTTA ] [+] EMBL CD167900 [ AGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGAGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTC ] [-] EMBL CD129548 [ AGATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAAT ] [-] EMBL CD129416 [ GATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGGGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGT ] [-] EMBL CD129342 [ GATACCGTTGCAGAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAGCTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCNTATCAATA ] [-] EMBL CD120671 [ AGTTGGAACGATTAAAGACAATGTGTGAAGAGGCTCTTGTGGAAAGTCCTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGCCAGGCC ] [-] EMBL CD141610 [ acGACAATGTGTGACGACGCTCTAGTGCAGAGTCTTTACGTAGAGAATGCATGTGACATATTTCGTCTAGCTGATA TGCATCACGCAGAACAATCGAAAGCACATACGTTAGAATGTATAATGCTCCATGCACATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGTCATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTTCAAGGCAATCATAAATTAAGAAAAAAATCATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTCTTCTA ] [-] EMBL CD198735 [ TGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATA TGCATAACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTGTGCGAAACTGAAGG CTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTCCT ] [-] EMBL CD067009 [ ACTAAATGAGTGCTTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCcctc ] [+] EMBL CD063237 [ AGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGGCAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCATATTCTTCATAATTCTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTCAAAAAAAACCCATTCAAGTTATAGTTTTCAG ] [+] EMBL CD191239 [ ATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAGTCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTC ] [-] EMBL CD134299 [ ATAAATTAAGAAAAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTCA ] [+] EMBL CD191309 [ ATAAATTAAGAACAAAAACATTTCTAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAGTCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAAACCCATTCAAGTTATAGTTTTC ] [+] EMBL CD126190 [ TAAAAGACC TATCAATAATATCTCCTGTGTATTAAAATTGCCCTTTACCTATAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTTTCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATTGATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTCTTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTC AAAAAACCCATTCAAGTTATAGTTTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG TCACAATTTCTTGCTTT CTAAAT ] [-] EMBL CD149497 [ GTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATACTTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAGTTCACAATTTCTTGCTTTACTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCTATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT] consensusID : consensus_11085#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence [GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCCGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG] [-] EMBL CD148401 [GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACAACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCTTTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCCGGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACAACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCAAAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACCGCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11085#0 CATCGAGCTTTAGTCACTAATGATAATCATGCTTCCAGTACTTCGTCTCATCCTAATCAT 60 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 CAGCTAACACATGTAATGTCCTCAACACTGACTCCAGCCACAACAACTAATATACCAACT 120 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 AAAGGTATAATAGTTCCTATTGCGTCTACTAATCCTAGTCCATTGTTAGTCCCATGTACG 180 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 GGTGGTGCTTCAGATCCATCCTCAGTAAAACAATTTCCATTAGATAATCCAACTAACAAT 240 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 GTTTCTAATGGTGATTGGCGTTCAGCCACATCTTCTTCCAGCTTTGTTTCTGCTCAAGGG 300 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 CATGCAAATCGTGACGATCAAGAAGTGAAATCAAATGGTATTTGTGATGTTAGTCAAAGG 360 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 ACTTCCGATGGCACCTGGTCTTCGTCCAAAAATGGTGTTCATCGGTGCCGGATGTCTGGT 420 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TCAGTGCCGTCCACATCCTCTGCCTTGCCGACAACTACTGATTCTTCATCATCTTCCACT 480 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TCGAGCGGTAAGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACA 540 consensus_11085#1 GCGTTACCCCTGATGAAACAAACTGCTGGACATAACGCAGATGTCGGTAGCAGCAGCACA 60 ** ************************************************* consensus_11085#0 ACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGTATCTACTCCT 600 consensus_11085#1 ACCACAAGTAGCACAACTATTAGTCAAAGTAGCTCTCTTGTCAACACTGCATCTACTCCT 120 ************************************************* ********** consensus_11085#0 TTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCT 660 consensus_11085#1 TTAATTACTTCGAAAGAGGAATCTGAAGATACCGAAGAGTCTGTTGAAGCGGAAACCTCC 180 *********************************************************** consensus_11085#0 GGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACA 720 consensus_11085#1 GGTACTTCTAGTCGTGTACGGCGAAGTACACGTAGAAGAAACACTACTTCAACTACCACA 240 ************************************************************ consensus_11085#0 ACTTCGAATCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCA 780 consensus_11085#1 ACTTCGAGTCGTCCACGCAACCGGACTAGTCGGGATTCATCACTTCTGGCTACTGTTTCA 300 ******* **************************************************** consensus_11085#0 AAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACC 840 consensus_11085#1 AAGGCTGCTTCAACCACTTCATCTCATTCTAATCTCGTCGCAACCCCATCGAGCTCTACC 360 ************************************************************ consensus_11085#0 GCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAGCATGGGTACCAGTAAT 900 consensus_11085#1 GCATGCTCGTTGGGTACAACAAATCAGACTGTAAAGTGTTCTAG---------------- 404 ******************************************** consensus_11085#0 GATAGTAGTTCAACGGTAAATGGAGCTTCAAGTTCTAATGTTGTACTTCGCCAATTCGAA 960 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 GCACACACTGCTATTCTAGCCGCTCGAAGCCCAGTTTTTGCTGCGATGTTTGGACATGGC 1020 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 ATGGAGGAGTCCAGAGCGAATAGGGTGGAAATCACGGACATGGAGCCAGATACCGTTGCA 1080 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 GAAGTTTTGCGTTACATATATACGGGACAAGTTGTTGGTATGAATCGACTCGCTCACGAG 1140 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 CTATTGGCCGCGGCTGACAAGTACCAGTTGGAACGATTAAAGACAATGTGTGAAGAGGCT 1200 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 CTTGTGGAAAGTCTTTCTGTAGAGAATGCATGTGATATATTTGGTCTTGCTGATATGCAT 1260 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 AACGCAGAACAATTGAAAGCACATACGTTAGAATTTATAATGCTCCATGCTCATGATGTG 1320 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TGCGAAACTGAAGGCTATGAACAGCTAGTTCGACATCGTCCACGTCTACTAAATGAGTGC 1380 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TTTCGAAGTTTAGCTTCACAACAACTCCCTCTTCGATGTTGGGCCCGTAAACGTCCAAGG 1440 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 CAATCATAAATTAAGAAAAAAAACATTTCTAAAAGACCTATCAATAATATCTCCTGTGTA 1500 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TTAAAATTTCCCTTTACCTAAAATCCGTATTCTTCATAATTTTCCTTTTCTACATATCTT 1560 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TCCTCTGTTTTCAAATCATTTATCTTGCGTAAAAGAAATACGAAAAAATAGGCACCTATT 1620 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 GATCATTTTTGTGTGCTTTTCAATATTTTACTGACACCACATAACAATCTAAAGCATCTC 1680 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TTGTTCTTCGTTTCCTAATTAAAATTATTTTGGTTCAAAAAAACCCATTCAAGTTATAGT 1740 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TTTCAGTCGAATATCTAGTCGCCGATTAGTTTAAACTTGTTACCTTCCCCTAACTTATAC 1800 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TTTTTGTTTAATCTTTTAACATTGTGTGTGTGTGTGTTGTTTGATTATTGTTCAGAGTAG 1860 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 TCACAATTTCTTGCTTTCTAAATTTCCAGCGTTGAACACTTCACCTTTTTTTTCTCTGCT 1920 consensus_11085#1 ------------------------------------------------------------ consensus_11085#0 ATAGTCACAGCGCTTGTTTCACATTGATCTCATCCGTTTATAAACATT 1968 consensus_11085#1 ------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||