These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11087#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 32 consensus length = 498 fasta sequence [CAAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA-GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT-TACAACCACCTGATGCCTACAAGGCA-TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAATAACTCTAATAAAAGAGGGGGATCCGCAAAAAAAAAAA] [+] EMBL CD148062 [CAAAAACGATGTCGTGTGTGGGAAAAACGGCAGGTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGAGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ] [+] EMBL CD136230 [ AAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGAGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ] [-] EMBL CD097491 [ AAAAGCGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ] [+] EMBL CD148144 [ AAAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ] [+] EMBL CD148125 [ AAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATT ] [+] EMBL CD148115 [ AAAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCG ] [-] EMBL CD147947 [ AAACGATGTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGTTAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ] [+] EMBL CD144238 [ GTCGCGTGACGGAAAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTGGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGA ] [+] EMBL AI068320 [ AAAACGGCAGTTCGGCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAATAACTCTAATAAAAGAG ] [+] EMBL AI820454 [ AAACGGCAGTTCGCCTGATGCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCATTTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGC ATG AAGAC AGT CTTACG AAGAA GCG AATTAGAGGCC AGCTG AACTGCAGCAGAGGT CAATCCAATTG AACCCTTGGTTTT CACAAAC ACGTTTCT ATATAAGG GTATTATG GAATAAC CCCAT AAAGAGGGGGATCCGCAAAAAAAAAAA] [+] EMBL AA791328 [ TGATGCGACCAGGTGTCATTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAAGGCCGATCTAAAATCAAACCTTTTGTGAAGGTgt ] [+] EMBL CD090730 [ GCGACCAGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAA ] [+] EMBL CD136342 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGct ] [+] EMBL CD136316 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGA ] [+] EMBL CD136319 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ] [+] EMBL CD193732 [ AGGTGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAA ] [+] EMBL CD137661 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCTTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ] [+] EMBL CD137675 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ] [+] EMBL CD137864 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGGTGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCA ] [+] EMBL CD137685 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAATATACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ] [+] EMBL CD137741 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGGGG ] [+] EMBL CD137785 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ] [+] EMBL CD137882 [ TGTCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAGACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGGATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGGATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGG ] [-] EMBL BG931714 [ TCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGAt ] [-] EMBL BG931586 [ TCGTTGTCTTAGTTTTGGCCGGACGTTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGAa ] [+] EMBL CD131562 [ TTACACAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAAGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAA ] [+] EMBL CD131445 [ TTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAA ] [+] EMBL CD131546 [ TTACGCAGGCAGAAAAGCAATCGTTATTAAGAGCTATGATGAGGGTTCAGGAGAAAAACCTTATGGGCACGCTCTGGTTGTTGGGATTGATAGATACCCGCGACGCATCCTCAGAAGAATGGGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAAGGCGAAATTAGAGGCCAAGCTGAAACTGCAGCAGAGGTACAAATCAAATGAAAACCCTTGGTTTTTCCACAAACTACGTTTCTAATATAAGGATTATTATGAAAAT ] [+] EMBL CD145909 [ GGAAAGAAACGGATGGAGA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ] [+] EMBL CD145967 [ GGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ] [+] EMBL CD145959 [ GGAAAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTGTTTTCGACACCAAGATTATCAATAAGAATGCAATGAAAGACAAGTCCTTACGAAAGAA ] [-] EMBL CD148030 [ AAGAAACGGATGGAAA GCCGATCTAAAATCAAACCTTTTGTGAAAGTTGTAAAT TACAACCACCTGATGCCTACAAGGCA TTCAGTGAATATTG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||