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Schistosoma mansoni
cluster # 11095 cluster # 11095       Sequences # 32       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11095#0 length = 982 sequences # 29  
consensus_11095#1 length = 483 sequences # 2  
consensus_11095#2 length = 341 sequences # 1  

consensusID : consensus_11095#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 29
consensus length = 982
fasta sequence
                              [ACCCGGTAT-ACCAC-CACCAAG-TAGAATAATTAGAATTAATCTGA-CAA-CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC-TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA-ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC-AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG-CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG]

[+] EMBL CD125916             [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTACAGGATCTTTTAGCCATCCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD125879             [ACCCGGTATCACCAA CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD125908             [ACCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCGAGTACAACTTGAAGTTAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCCAATAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD126181             [ACCCGGTAT AC  G CACCAAGATAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD126168             [ACCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCCAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD126114             [ACCCGGTA  A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCAAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGGAATCTCAG CA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD125911             [ CCCGGTAT A CAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGGTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AGTTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD125900             [gCCCGGTATCACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAAC AGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD125931             [ aCCGGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAGTGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD126049             [  CCCGTAT ACCAC CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATNACCATTATGAATGAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGATTGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD126154             [ aCCGGT T A CAG CACCAAG TAGAATAATTAGAATTAATCTGA CAA CACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTACATAAAAACTGGAATCTCAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD126158             [  CCGGTATCACCACGCACCAAG TAGAATAATTAGAATTAATCTGAGCAAGCACCACTTGATATAAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCGTGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD164830             [                                                                                                             AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAGTAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD126009             [                                                                                                             AATTCATTATTACAGTAGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD126151             [                                                                                                                              GCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAACAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAcgacaggct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD126028             [                                                                                                                                ggAATGACCGCGAGTAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD125956             [                                                                                                                                         aCCAACCTGTGGATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTANATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD125940             [                                                                                                                                        ccCCAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTACAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGAC                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD125982             [                                                                                                                                           CAATAAGTGCATAACAGCCTCCACTAGCTCC TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACGACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGCTTTGTTGCTATAAGTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD126019             [                                                                                                                                                                         C TGCCAACAAAACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAAATTGTAAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD094875             [                                                                                                                                                                                                                                     AACAAATAA ACTAATCCAACTCGCCAAAATTTATGGACGATTTCAAGTAAAAGACCAAGTACAACTCGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD095363             [                                                                                                                                                                                                                                     AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD094763             [                                                                                                                                                                                                                                     AACAAATAA ACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAAT                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD125936             [                                                                                                                                                                                                                                       gAAATAAGACTAATCCTAGTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGACATAAGCCTGTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD125955             [                                                                                                                                                                                                                                                                                   AGTAAAAGACCAAGTACAACTTGAAGTAAAC AATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGCAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD191389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGTAACAACGTAGTAAATAAAAACTGCAATCTCAG CAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTT                                                                                                                                                                                     ]
[-] EMBL CD094609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAGGAGGGCGACAGTCATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACCAAAATTTACAGCGACAGCCCGCTGATGCCCGCGTCCACAATCTGGTGCTATAGCCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATAG]
[-] EMBL BG931300             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ggTCCGGAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGTTTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGCGCGCAGATTGCTAGAC                                                      ]
[+] EMBL CD156680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAGAGTCCCTTCATCCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGGGAAGTCTTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTGCTTGACATTCTGACCATAAAAAGTGAGTATACCAGCTGGTTTATATA ]


>consensus_11095#0 ACCCGGTATACCACCACCAAGTAGAATAATTAGAATTAATCTGACAACACCACTTGATAT AAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGT AGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCTGCCAACAAAACAAA TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCC AACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACA ATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGC TTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGC TGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAAC TGCAATCTCAGCAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGTCATAAGC CTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCATCGTAACC AGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAGCCAACAC TGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCATCCTCAGA TAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCATCTGCCGA GTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTCTTTTCAA ATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGAACTTTTT ATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAAAAAGTGA GTATACCAGCTGGTTTATATAG



consensusID : consensus_11095#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 483
fasta sequence
                              [ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA]

[+] EMBL CD126050             [ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAA]
[+] EMBL CD126096             [                                                                                                                                                                                                                                                                                                                                                                        ATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGAGCCAGGTTTG                               ]


>consensus_11095#1 ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGATATA AAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATTACC GTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAAACT AATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGCTAT ATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAAGTA AACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATCTCC ATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATG ACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAA AAA



consensusID : consensus_11095#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 341
fasta sequence
                              [GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT]

[+] EMBL CD126055             [GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT]


>consensus_11095#2 GGTAATGCCCTGGCGACAAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACG CCTAACAAATAAACTAATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCA AGTACAACTTGAAGTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATA TAGGTTAAAAATCTCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCA ATTGGAACACCAGATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTA ACAACGTAGTAAATAAAAACTGCAATCTCAGCAATAGTTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11095#0      ACCCGGTATACCACCACCAAGTAGAATAATTAGAATTAATCTGACAACACCACTTGATAT 60
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ---ACGGGTATACCACCGACAAGTACAATATTAGAGATGAATCTGACACGAACACTTGAT 57
                                                                                   

consensus_11095#0      AAAGTTTAAAGGATCTTTTAGCCATCCCTCCTGCATTATATCCCAATTCATTATTACAGT 120
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ATAAAGCTTTAAACGAGATCTTATAACCATCCCTCCTGCATTATATCCCAATTCATCATT 117
                                                                                   

consensus_11095#0      AGCTAAATGAGCGCCAATAAGTGCATAACAGCCTCCACTAGCTCCTGCCAACAAAACAAA 180
consensus_11095#2      ----------------------------------------GGTAATGCCCTGGCGACAAA 20
consensus_11095#1      ACCGTATCTTAATGAGCGCCAGTAAGTGCATAAGAGCCTCCAATATCTCCTGACAATAAA 177
                                                                    *  *      * ***

consensus_11095#0      -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 234
consensus_11095#2      -----TGGGTCACTCACAGAATGAGCTAAAGAACCTGCAATAACGCCTAACAAATAAA-C 74
consensus_11095#1      ACTAATGGGTCACTCACAGAATGAGCTAAAGAACCTGCTATAACGCCTAACAAATAAAGC 237
                            ********************************* ******************* *

consensus_11095#0      TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 293
consensus_11095#2      TA-ATCCAACTCGCCAAAATTTATGAACGATTTCAAGTAAAAGACCAAGTACAACTTGAA 133
consensus_11095#1      TATATCCAACTCGCCCCTATTTATTAGCGATTTCAAGTTACAGACCAAGTACAACTTGAA 297
                       ** ************   ****** * *********** * *******************

consensus_11095#0      GTAAACAATTGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 353
consensus_11095#2      GTAAACAATAGAAAGCTAGATGCACATAACCATTATGAATAAACATATAGGTTAAAAATC 193
consensus_11095#1      GTAAACCATTGACAGCTATATGCACATACCGATTATGAATAAACATATAGGTTAAAAATC 357
                       ****** ** ** ***** ********* * *****************************

consensus_11095#0      TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 413
consensus_11095#2      TCCATGGTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 253
consensus_11095#1      TCCATGCTTCATGACGTTTAGTTGGGTTATAAATAAGTATACTATCAATTGGAACACCAG 417
                       ****** *****************************************************

consensus_11095#0      ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 473
consensus_11095#2      ATGACGCTGTAACGATGCTGGATGTGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 313
consensus_11095#1      ATGACGCTGTAACGATGCTGGATGAGCCAGGTTTGTTGCTATAAGTAACAACGTAGTAAA 477
                       ************************ ***********************************

consensus_11095#0      TAAAAACTGCAATCTCAGCAATAGTTATCAAAGGGATAAATATAGGAGGAGGGCGACAGT 533
consensus_11095#2      TAAAAACTGCAATCTCAGCAATAGTTAT-------------------------------- 341
consensus_11095#1      TAAAAA------------------------------------------------------ 483
                       ******                                                      

consensus_11095#0      CATAAGCCTGTATATAATTATCAACATCTGCTTCACCCCAATTGTAGCCATCGATAGCAT 593
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      CGTAACCAGAATTTACAGCGACAGCCCGCTGATGCTCGCGTCCACAATCTGGTGCTATAG 653
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      CCAACACTGCACGATTGAGGACTCGTTTGTGAATACGCAGTCTCCGGAGAGTCCCTTCAT 713
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      CCTCAGATAGAACTTGTTTTAGGAACTCATCGTAAGTAATGAACTGGTTTCCATCTTCAT 773
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      CTGCCGAGTCCACAAGATTGTGAACTTTTGATTCTGGGAGGTCAGACTTCCCGAGAAGTC 833
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      TTTTCAAATCAGACAATGGAATACCATCTTTTGTACTGTACTGATCAAAGGTGGGTTTGA 893
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      ACTTTTTATCCAAATAAGTGCGCAGATTGCTAGACCGCGTACTTGACATTCTGACCATAA 953
consensus_11095#2      ------------------------------------------------------------
consensus_11095#1      ------------------------------------------------------------
                                                                                   

consensus_11095#0      AAAGTGAGTATACCAGCTGGTTTATATAG 982
consensus_11095#2      -----------------------------
consensus_11095#1      -----------------------------
                                                    




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)