These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11101#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 1503 fasta sequence [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC-AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC-GGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG] [+] EMBL CD159302 [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTNTTGGATCAGTCCCATCACTATTTG ] [+] EMBL CD159337 [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATT ] [+] EMBL CD153233 [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAGTCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACT ] [+] EMBL CD094786 [GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCTAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACTGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAGACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGA ] [+] EMBL CD152558 [ TTTGCGCGAGGTTGGGCACGCTATTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATATTAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACTAATCTCGTACACCTTCCGAGA ] [-] EMBL CD179417 [ TTGAAGTC AAAGTGCTAGGGTTCTATCGTTGGGTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGATAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGTAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACGAGGC ] [-] EMBL CD165705 [ TCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATTCACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGCTGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGATACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAGTTCACTTCCATTTTGCTTGAATGGTCA ] [+] EMBL CD129219 [ CCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCCAGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGAACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC GGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGC ] [-] EMBL CD158635 [ CCGAGCTGGTTCGGATGCAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGC GGGgtt ] [-] EMBL CD191207 [ ATGTAATTCGATGATGATGGTAATTCCGAATGGCATGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAAC AGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCT ] [-] EMBL CD157103 [ CACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAGTGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATT ] [+] EMBL CD118293 [ TCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTCAGAAAGTCAGCCACTTTAGTCG ] [+] EMBL CD119319 [ TCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAGCGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAGAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTC ] [-] EMBL CD194270 [ CACTACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTG ] [+] EMBL CD169290 [ GCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTTAGTTGACATCGCAGATGCTACGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACT ] [+] EMBL CD119516 [ GACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGAGTTATGCTATAAGATACTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTA ] [+] EMBL AI977025 [ AACGCAAAGACATCTAGCCTTGGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGT ] [+] EMBL CD146710 [ AAAGTCAGCCACTTTAATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTCCCGCGTGCAGTGAAGGGAGCAGCANACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGCCCTCCCTCGTCTTAGT ] [+] EMBL CD185648 [ TGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCACCATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGC ] [+] EMBL CD116121 [ TGATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTANATTACTT ] [-] EMBL CD116053 [ GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG] [-] EMBL CD116280 [ GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG] [-] EMBL CD116291 [ GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG] [-] EMBL CD116162 [ GATGTCAGAAGTTGATGAAGAACCTGACTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAATGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTACTTG] [-] EMBL CD163731 [ AGGAGGATGACAGTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACAGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTA ] [+] EMBL CD111524 [ GTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCCGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTta ] [+] EMBL CD111479 [ GTAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAA ] [-] EMBL CD111604 [ TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC ] [-] EMBL CD110949 [ TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCANATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC ] [-] EMBL CD098460 [ TAGTAATGCTCTCACAGCGGAACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCGCCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAATGGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTATATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTGCAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAGTACTGTGCTCCCAGCATTAGTTCAAACACTTAAC ] consensusID : consensus_11101#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 375 fasta sequence [AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGATGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTC-TCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTNCTGCTATCTCTTTCTGTT] [-] EMBL CD191343 [AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGATGATGATGGTAATTCCGAATGGCGTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTCTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTC TCCGAGAATTGGTTCCCGTTGCACTACAGGCTATTGCTNCTGCTATCTCTTTCTGTT] [-] EMBL CD166449 [ ATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATTTGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTTCCGAGAATT ] [-] EMBL CD166377 [ ATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTCACCTGATTCCGGGTTACGCGAAATCGCTTGCCCCATTTTTGGATCAGTCCCATCCCTAAATGAAAACCAACAGGCCCAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTTTGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGTTCAAAATGCAACTGAAGACTCTGGTCTTC ATCTC TCCG GAATa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11101#0 GATTTTGCGCGAGGTTGGGCACGCTAGTTGAAGTCAAAAGTGCTAGGGTTCTATCGTTGG 60 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 GTCACAAATGTCTGATTACGCTGCATTTCAAACTTTGTTGTTACAACTTCAAAGCTCGGA 120 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 TAACGAATCTCGTACACGTTCGGAGACCGCGTACGATGCCATTACACCGACAACTCGATT 180 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 CACTCTTCTCCTCCAAGTGTTAAACGACAAAAGCGTAATCTCCCAGTCTCGACATATGGC 240 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 TGCAATTCTCGCACGCCGGCTACTAGTCAATGATTATGGTTCAGCATTCGAGCCTCTTCC 300 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 AGTCGAAACAAAAAATTCAGCTAAGCAGCAGCTAGTTTTAATTTTAGTTCATGAAAGAGA 360 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 ACAATTAATGCGCAGAAAAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGCAATTCGA 420 consensus_11101#1 -----------------AAGTAGCTGATCTGATCTCCGAGCTGGTTCGGATGTAATTCGA 43 *********************************** ******* consensus_11101#0 TGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTC 480 consensus_11101#1 TGATGATGGTAATTCCGAATGGCCTGAATTCACTTCCATTTTGCTTGAATGGTCAAATTC 103 ************************************************************ consensus_11101#0 ACCTGATTCCGGGTTACGCGAAATCGCCTGCCACATTTTTGGATCAGTCCCATCACTATT 540 consensus_11101#1 ACCTGATTCCGGGTTACGCGAAATCGCTTGCCACATTTTTGGATCAGTCCCATCACTATT 163 *************************** ******************************** consensus_11101#0 TGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTC 600 consensus_11101#1 TGGAAACCAACAGGCACAAAGCATAGGGATTATTGGTCAGTTTCTGGTCAGGGCTATTTT 223 *********************************************************** consensus_11101#0 TGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGG-TTACGTGCCTTAGCTGCTTTTACTGT 659 consensus_11101#1 TGACCCTTCAAGCTCAGAGCTTAGAGCTGCGGGGTTACGTGCCTTAGCTGCTTTTACTGT 283 ********************************* ************************** consensus_11101#0 TCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACT 719 consensus_11101#1 TCAAAATGCAACTGAAGACTCTGTACTTCAATCTCTCCGAGAATTGGTTCCCGTTGCACT 343 ************************************************************ consensus_11101#0 ACAGGCTATTGCTACTGCTATCCAAACAGATTCAGAAGATGATACACCTCTAAAAGCTTT 779 consensus_11101#1 ACAGGCTATTGCTNCTGCTATCTCTTTCTGTT---------------------------- 375 ************* ******** ** consensus_11101#0 AGTTGACATCGCAGATGCTGCGCATAAATACCTAAGACCTTATTTAGCGCCTACATTGGA 839 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 GTTATGCTATAAGATATTGTGTAACGAAGAGCTTGAGGAAACGCAAAGACATCTAGCCTT 899 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 GGAAGTGATCGTTACACTAGCAGAAAATATACCAGCGGGTGTAAGAAAGTCAGCCACTTT 959 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 AATCGAGTCTCTTGTGGGGACATTGCTCAACATGATGTCAGAAGTTGATGAAGAACCTGA 1019 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 CTGGGCTGATGCTGACACTGCAGAAGAGGAGGATGACAGTAGTAATGCTCTCACAGCGGA 1079 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 ACTTGCACTTGACAGGTTATCATGTGCTGTAGGTGGTCAACATATCCTGAATGAAATTCG 1139 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 CCGATCTGTCCCAAATATGCTGCAACACGCTGACTGGAAGCGACGGTATGCTGGATTAAT 1199 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 GGCAATTTCCGCGTGCAGTGAAGGGAGCAGCAAACAGATGGAGACTATGCTTGGTTCTAT 1259 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 ATTAGATGCTGTCCTCCCTCGTCTTAGTGATCCACATCCACGTGTTCGATATGCAGCTTG 1319 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 CAATTCTGTTGGACAAATGGCAACGGATTTTGGTCCGAAACTACAGAAAACTCATCACAG 1379 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 TACTGTGCTCCCAGCATTAGTTCAAACACTTAACGATACGGTGCCTAGAGTACAAGCCAA 1439 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 TGCGGGGGCTGCTCTAGTCAATTTCTGTGAGAAAGTACCACAGCACATTCTGGTAAATTA 1499 consensus_11101#1 ------------------------------------------------------------ consensus_11101#0 CTTG 1503 consensus_11101#1 ---- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||