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Schistosoma mansoni
cluster # 11123 cluster # 11123       Sequences # 35       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11123#0 length = 721 sequences # 32  
consensus_11123#1 length = 495 sequences # 1  
consensus_11123#2 length = 339 sequences # 2  

consensusID : consensus_11123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 32
consensus length = 721
fasta sequence
                              [CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTTGTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCGCCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC-AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT-GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG-AAGAAGAGGGATTAGATGCACAACAACAAGATGAC-AAAGCAAAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCATTCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACATCAAAGCA]

[+] EMBL CD079578             [CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTTGTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCGCCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCANAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCATTCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACATCAAAGCA]
[+] EMBL CD148963             [                                                                                                                                           GCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCA                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD114790             [                                                                                                                                              GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA                                                                                                                                                             ]
[+] EMBL CD114778             [                                                                                                                                              GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAGGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA                                                                                                                                                             ]
[+] EMBL CD114828             [                                                                                                                                              GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTGGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAA                                                                                                                      ]
[+] EMBL CD114762             [                                                                                                                                              GCTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGGACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA                                                                                                                                                             ]
[+] EMBL CD114720             [                                                                                                                                              GCTGGCAGAGTGCGTCGCCGCGTTGGAAGTGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA                                                                                                                                                             ]
[+] EMBL CD114780             [                                                                                                                                              GCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCGAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAA                                                                                                                                                             ]
[+] EMBL CD114764             [                                                                                                                                              GCTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAAGAAG                                                                                                                                                            ]
[-] EMBL CD071909             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACATTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATT                                                                                                                                                     ]
[-] EMBL CD071968             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATT                                                                                                                                                     ]
[-] EMBL CD071953             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAGATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG TTAGTATTG AAGAAGAGGGATT                                                                                                                                                     ]
[-] EMBL CD144851             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD114665             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC TAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGGAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD144896             [                                                                                                                                               CTGACAGAGCGCGTCGCCGCGTGGGAAATGTAGGTGGACAGCGCGGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCT AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD114667             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCTGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGGAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD114672             [                                                                                                                                               CTGGCAGAGTGCGTCGCTGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAATGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD144849             [                                                                                                                                               CTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGACTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD144871             [                                                                                                                                               cgGGCAGAGTGCGTCGCCGCGTGGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAGTT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[+] EMBL CD138957             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAACACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACCAGATGACAAAAGC AAAGCATTAATTAATGC                                                                                                       ]
[+] EMBL CD125538             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAGAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAAAGCATTAATTAATGC                                                                                                       ]
[+] EMBL CD182799             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTNGAAAAc                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD164774             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAAC                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD125531             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTACGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCGGACCAATCAAAGGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCANAAGCATTAATTAATGCACAAATTA                                                                                               ]
[+] EMBL CD182867             [                                                                                                                                                         GCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCG                                                                                                                                                                                                                                                           ]
[-] EMBL CD186665             [                                                                                                                                                            TCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAAC                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD144894             [                                                                                                                                                             CGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD144874             [                                                                                                                                                                    TTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGGGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCCAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCGGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[-] EMBL CD144854             [                                                                                                                                                                    TTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTG AAGAAG                                                                                                                                                            ]
[+] EMBL CD184334             [                                                                                                                                                                                                                                                                         tcCACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG                                                                                                                                                                             ]
[-] EMBL CD063395             [                                                                                                                                                                                                                                                                                        GATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCC AAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAG                                                                                                                                                                               ]
[+] EMBL CD119697             [                                                                                                                                                                                                                                                                                                                                                                                                           ccttcatGGAAAA CGAAGAC TGGAAATT GAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAG TTAGTATTG AAGAAGAGGGATTAGATGCACAACAACAAGATGAC AAAGCAAAAGCATTAATTAATGCACAAAT                                                                                                 ]


>consensus_11123#0 CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTT GTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCG CCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGG ACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCG TGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGA AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA AATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGC TGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTT AAAACAAGAGTTTAGTATTGAAGAAGAGGGATTAGATGCACAACAACAAGATGACAAAGC AAAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCATTCCAGT CGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACATCAAAGC A



consensusID : consensus_11123#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 495
fasta sequence
                              [ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTCAGATGCAGACCAATCAAAAGAAAGTT]

[+] EMBL CD183756             [ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTCAGATGCAGACCAATCAAAAGAAAGTT]


>consensus_11123#1 ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGGACAGCGCCGTA TGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCGTGTCGAAAATG TCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGAAAGTTCAAAGA AAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAG AAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAAC GCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAA ATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGNAGGAG ACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTCAGATGCAGACC AATCAAAAGAAAGTT



consensusID : consensus_11123#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 339
fasta sequence
                              [CGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG]

[-] EMBL CD144853             [CGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAG       ]
[+] EMBL CD181471             [                                                                                                                                                         CCGGGAGCATCAAAGGAAAATCGAAGACATGGAAATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCAGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGAGCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG]


>consensus_11123#2 CGTTGGAAATGTAGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATC AAAAGAAAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACG TCGAAAAGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGA CATGGAAATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGC AGCTGCTGCTGAGGCTAAACGTCGTGAAGAAGAAGCAGCTCGTGAACAAGCTGAATACGA GCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11123#0      CAGCCAANAATTTGGCACGAGGGTCTTCGGCGGGCTTATTTTCGCAGTCGCTATTCTTTT 60
consensus_11123#2      ------------------------------------------------------------
consensus_11123#1      ------------------------------------------------------------
                                                                                   

consensus_11123#0      GTCTGGGGTATTTATTGTCTGGAAATTGTATAACAAGTCAACTAAGAAAGGTGGACAGCG 120
consensus_11123#2      ------------------------------------------------------------
consensus_11123#1      ------------------------------------------------------------
                                                                                   

consensus_11123#0      CCCCCACGTACATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGG 180
consensus_11123#2      ------------------------------------------------------------
consensus_11123#1      -----------ATGCAGCTGCTGCTGGCAGAGTGCGTCGCCGCGTTGGAAATGTAGGTGG 49
                                                                                   

consensus_11123#0      ACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCG 240
consensus_11123#2      ---------------------------------------------------CGTTGGAAA 9
consensus_11123#1      ACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGAATCTGAGGAGGACGATAGGCG 109
                                                                          ** * *   

consensus_11123#0      TGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGA 300
consensus_11123#2      TGT---AGGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCAGACCAATCAAAAGA 66
consensus_11123#1      TGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCTTCAGATGCAGACCAATCAAAAGA 169
                       ***   *  **    *     * * *   * ***     *********************

consensus_11123#0      AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 360
consensus_11123#2      AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 126
consensus_11123#1      AAGTTCAAAGAAAGTTGGCTCCAAAAAAGCTGCCAAGTTAGCTGAAAAGGAACGTCGAAA 229
                       ************************************************************

consensus_11123#0      AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 420
consensus_11123#2      AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 186
consensus_11123#1      AGAAGAGCGAGAAGCTGAGGAACGTTACCGGGAGCATCAAAGGAAAATCGAAGACATGGA 289
                       ************************************************************

consensus_11123#0      AATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAAAGCTGCAGCCGCGGCA-GCTG 479
consensus_11123#2      AATTGAAAAACGCAAGAAAGCAGAGGAAGCAGAAGAAAAAGCTGCAGCCGCGGCA-GCTG 245
consensus_11123#1      AATTGAAAAACGCAAGAAAGCAGAAGAAGCAGAAGAAAATGCTGCTGGCAGAGTGCGTCG 349
                       ************************ ************** ***** * *   *   *  *

consensus_11123#0      CTGC--TGAGGCTAAACGTCGTGAAGAAGA---AGCAGCTCGTGAACAAGCTGAATACGA 534
consensus_11123#2      CTGC--TGAGGCTAAACGTCGTGAAGAAGA---AGCAGCTCGTGAACAAGCTGAATACGA 300
consensus_11123#1      CCGCGTTGGAAATGTANGTGGACAGCGCCGTATGGCTGCTCGGATGAGAGATGCTTCAGA 409
                       * **  **    *  * ** *  *          ** *****      ** **  *  **

consensus_11123#0      GCGCTTAAAACAAGAGTTTAGTATTGAAGAAGAGGGATTAGATGCACAACAACAAGATGA 594
consensus_11123#2      GCGCTTAAAACAAGAGTTTAGTATTGAAGAAGCGGGAAG--------------------- 339
consensus_11123#1      ATCTGNAGGAGACGATAGGCGTGTCGAAAATGTCATGGAAAATCTAGACACCCGGCCCTC 469
                             *  * * **     ** * *** * *                            

consensus_11123#0      CAAAGCAAAAGCATTAATTAATGCACAAATTATTGCAGCTATTGAAGAAGCAAAAATCAT 654
consensus_11123#2      ------------------------------------------------------------
consensus_11123#1      AGATGCAGACCAATCAAAAGAAAGTT---------------------------------- 495
                                                                                   

consensus_11123#0      TCCAGTCGAACATTTGGCAATCAATTTAAATTTGAAAACAGAGGTTTGTATAGAAAACAT 714
consensus_11123#2      ------------------------------------------------------------
consensus_11123#1      ------------------------------------------------------------
                                                                                   

consensus_11123#0      CAAAGCA 721
consensus_11123#2      -------
consensus_11123#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)