These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11143#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 724 fasta sequence [TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC-AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC-TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG] [+] EMBL AI395807 [TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTANGCAGCCTGGCGCTCACTTCNTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATC AACTCGTCGC ] [+] EMBL CD073898 [ AATTTTATTGATATACCAGAATAGAACTAGACTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGGGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCA ] [-] EMBL CD118302 [ CAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG] [+] EMBL CD097598 [ CCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ] [+] EMBL CD097604 [ CCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGGGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ] [-] EMBL CD148211 [ gCCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGTGCGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACCTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ] [-] EMBL CD148229 [ CCATGGTTTTACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGGGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAGAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAACTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ] [-] EMBL CD110892 [ GTTTAACATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACACCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG] [-] EMBL CD155546 [ CATC AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACCCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCTG] [-] EMBL CD148925 [ CATCAAAAGATAACAGTAGATTTCGCAACAGAAATATTTTTAGTTGC TTTTTTTGCTTGGTAGGCAGCCGGGCGCTCACTTCTTAGTTTTTCAAACTCTTCATCATCATCAGAGACGAATAAATCAAACTGGTCGCTTGCAGCAGGTTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAGACCTTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTC ] [+] EMBL CD097573 [ C AAAGATAACAGCATACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATCGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCACGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCCT ] [+] EMBL CD188327 [ AAAGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATTCTACCC ] [+] EMBL CD177765 [ TAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAAATATTGCCAAAATCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAA ] consensusID : consensus_11143#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 696 fasta sequence [TTTTTATTGATATACCAGAATAGAACTAGAGTTTGTAANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT-GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA-TTTTTAGTTGC-TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA-GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC-TTTTTTC-GCTCC-GCACCAAAGGAATCAATATGTCT-GTACCA-GCGTGAAATATTGCCAAAA-TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTGGCCTCGTGCCAAATTNTTGGCCTCG] [-] EMBL CD079636 [TTTTTATTGATATACCAGAATAGAACTAGAGTTTGTAANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTGGCCTCGTGCCAAATTNTTGGCCTCG] [+] EMBL CD133602 [ TCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCGCCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTGCATCTCCGCCATATCAGTGTCGCCGCCCCATGGATCTACATCAAAGATAACAGTAGACTTCGCAACAGGAAT ] [-] EMBL CD185295 [ AGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAACCAAACTCGTCGCTTGCAGCAGGCTGA ] [+] EMBL CD113933 [ GTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAATCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTAGAATACTACGGACAGCTTCTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAACTTTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGT ] [-] EMBL CD110990 [ TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGGCGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAA ] [-] EMBL CD111008 [ TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGCTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAA ] [+] EMBL CD137429 [ GATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTCTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA T ] [-] EMBL BF936191 [ AGTTTGGATGCACCCCATAACAGCCCATCAGTTT GAATACTACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGCTTTTTTTTGCTTCGTAGGCAGCCTGGGGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGAGGTACATTTAGCTGGTTCAGGATTAGGGGATTCCGGTGCAGCAGGAAAC TTTTTTCGGCTCCGGCACCAAAGGAATCAATATGTCTGGTACCAGGCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCA ] [+] EMBL CD134105 [ TTCCA CCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCANAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCNCAAA TCTGATAACGATGACTTTTCAAGGGCTATNAACGTTGAAACATCTGCTTGAGTAGGCTGAAACC ] [+] EMBL CD163609 [ GTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACA TTAGCTGGTTCGGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC ] [+] EMBL CD184609 [ GTCGTCGCCCCATGGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATC ] [+] EMBL CD131796 [ GGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAGTCACCAAA ] [-] EMBL AW017028 [ GGTTTTACATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTT ] [-] EMBL CD111937 [ CATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAGAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAGCGTTGAAA ] [-] EMBL CD110768 [ CATCAAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAA ] [-] EMBL CD199625 [ AAAGATAACAGTAGACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAA ] [-] EMBL CD137431 [ GACTTCGCAACAGGAATA TTTTTAGTTGC TTTTTATGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTCGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCT ] [-] EMBL CD171515 [ GAATATTTTTTAGTTGC TTTTTTTGCTTCGTAGGCAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAA ] [-] EMBL CD131241 [ CAGCCTGGCGCTCACTTCTTAGTTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGA ] [-] EMBL CD120753 [ TTTTTCATACTCTTCATCATCATCAGAGACGAATAAATCAAACTCGTCGCTTGCAGCAGGCTGA GTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGTGCAGCAGGAAAC TTTTTTC GCTCC GCACCAAAGGAATCAATATGTCT GTACCA GCGTGAAATATTGCCAAAA TCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAGGGCCGAAGCAGTTTTCAAcgtttat ] [+] EMBL CD112809 [ ATATTGCCAAAACTCTGATAACGATGACTTTTCAAGGGCTATAAACGTTGAAACATCTGCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTCTTCAG ] consensusID : consensus_11143#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 323 fasta sequence [TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTTCAATACATTTAGAAACAGCGTGGGAACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTTG] [+] EMBL CD161669 [TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTTCAATACATTTAGAAACAGCGTGGGAACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTT ] [-] EMBL CD161738 [ TTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGATAAACATATACAGATTTTCTCTACAATACATTTAGAAACAGCGTGGGGACATAAAGAAAACGATACATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTTCTAACATATCAGTGCTAACCTGAAAAAAAGACATCAATATTCTACTTTACAAACTCAAGAATTCTGAGAATAAAATTTTAATTAAACTTATAGATTAAATTAATGGTTTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11143#0 TTTTTTTTTTTTTTTTTCATCCAACAAATTTTATTGATATACCAGAATAGAACTAGAGTT 60 consensus_11143#1 ---------------------------TTTTTATTGATATACCAGAATAGAACTAGAGTT 33 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 TGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCTTCTT 120 consensus_11143#1 TGT-AANAGCAGCTATATCAACTGACTGGACANAATCTTCAAACTTCGTTATTTCTTCTT 92 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 CTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAA 180 consensus_11143#1 CTAACATATCAGTGCTAACCTTATCATCTTCAATAACACATGCAATTTGGAGTTTCTTAA 152 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATAC 240 consensus_11143#1 TCCCATAGGCCAAAGGGATAAGTTTGGATGCACCCCATAACAGCCCATCAGTTTGAATAC 212 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 TACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAA 300 consensus_11143#1 TACGGACAGCTTTTTCCATCTCCGCCATATCAGTGTCGTCGCCCCATGGTTTTACATCAA 272 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 AGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTGCTTCGTAGGCAG 360 consensus_11143#1 AGATAACAGTAGACTTCGCAACAGGAATATTTTTAGTTGCTTTTTTTGCTTCGTAGGCAG 332 consensus_11143#2 ------------------------------------------------------------ consensus_11143#0 CCTGGCGCTCACTTCTTAGTTTTTCATACTC-TTCATCATCATCAGAGACGAATAAATCA 419 consensus_11143#1 CCTGGCGCTCACTTCTTAGTTTTTCATACTC-TTCATCATCATCAGAGACGAATAAATCA 391 consensus_11143#2 -------------TTTCATTGTTTTGAATTCATTCATCCTTATGAATCTACAGTTGAT-A 46 * * * * *** * ** ****** * ** * * * ** * consensus_11143#0 AACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGT 479 consensus_11143#1 AACTCGTCGCTTGCAGCAGGCTGAGTACATTTAGCTGGTTCAGGATTAGCGGATTCCGGT 451 consensus_11143#2 AACATAT--------ACAGATT--TTCTCTTCAATACATTTAGAAACAGCG----TGGGA 92 *** * *** * * ** * ** ** * **** ** consensus_11143#0 GCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAA 539 consensus_11143#1 GCAGCAGGAAACTTTTTTCGCTCCGCACCAAAGGAATCAATATGTCTGTACCAGCGTGAA 511 consensus_11143#2 ACATAAAGAAAACGAT---ACATCCAACAAATTTTATTGATATACCAG-AATAGAACTAG 148 ** * **** * * * ** ** ** **** * * * ** * consensus_11143#0 ATATTGCCAAAATCTG--ATAACGA-TGACTTTTCAAGGGCTATAAACGTTGAAACATCT 596 consensus_11143#1 ATATTGCCAAAATCTG--ATAACGA-TGACTTTTCAAGGGCTATAAACGTTGAAACATCT 568 consensus_11143#2 AGTTTGTTAAAAGCAGCTATATCAACTGACTGGACAAAATCTTCAAACTTCGTTATTTCT 208 * *** **** * * *** * * ***** *** ** **** * * * *** consensus_11143#0 GCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC 656 consensus_11143#1 GCTTGAGTAGGCTGAAACCCTGATATATAACTTCTGGTAAGCAGATAATCATCTAGCTTC 628 consensus_11143#2 TCTT-------CTAACATATCAGTGC-TAAC--CTGAAAAAAAGACATCAATATTCTACT 258 *** ** * * * **** *** ** *** * ** * consensus_11143#0 TTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATTCGGTAGCGTGTGTAAATT 716 consensus_11143#1 TTCAGGGCCGAAGCAGTTTTCAAGTCACCAAAGTCAATCATT-GGCCTCGTGCCAAATTN 687 consensus_11143#2 TTACAAACTCAAGAATTCTGAGAATAA--AATTTTAATTAA--ACTTATAGATTAAATTA 314 ** * *** * * * * * * ** * *** * ** * consensus_11143#0 CTACCCTG- 724 consensus_11143#1 TTGGCCTCG 696 consensus_11143#2 ATGGTTTTG 323 * * |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||