Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 11144 cluster # 11144       Sequences # 36       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11144#0 length = 1277 sequences # 19  
consensus_11144#1 length = 1128 sequences # 12  
consensus_11144#2 length = 596 sequences # 3  
consensus_11144#3 length = 407 sequences # 1  
consensus_11144#4 length = 222 sequences # 1  

consensusID : consensus_11144#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1277
fasta sequence
                              [GGTGCGACTCTGCTAGGCCCGCGGCGNAATTCACTAGTGATTGGATGGAAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTACAGTTGCACTATGAAGACTGCGTGGAGCCGGCAGATCTCCACTAACGATAGGTTTGATCCATGTCATAGTATCAATTTCTAATTGCCAAAGATCCCCAAGTCGATTACCGGACATGCCACCATATACCAAAAGACGCCATTTCTTTACCATTCCATCAGGNACCCTGAT-AGCTACTGCACTGTGAGATTCTCTAGGTGTAGGCGGCTGACCATATGTGTTTGGGATATCCCAACACATAGTACTTGAATTAGGTTTTAATTCCAGAGTGTACAGATCGTTTAAGTATCTTGGTATATTGTTTTTAGGGTCATCACTATCATTTGTTATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC-ATGGACAGGGG-CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG-TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCACCTAACGATAGGACCTACACCAGCCATCTTGGAAAGCG]

[+] EMBL CD178165             [GGTGCGACTCTGCTAGGCCCGCGGCGNAATTCACTAGTGATTGGATGGAAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACACTCGTCAGCGACTTCCATTGTCAATGGTTCACAAGCCATTGTGTCGAGATTGAGACTAGCCAAAGTATTTGTACACTTGCATTCTTTTTCTTGAGCTGACATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTACAGTTGCACTATGAAGACTGCGTGGAGCCGGCAGATCTCCACTAACGATAGGTTTGATCCATGTCATAGTACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD177855             [                                                                              AACATAATACTTGCGAATGTGCAAAATATAAGCATGTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACCAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD178602             [                                                                                     TACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD137325             [                                                                                                CTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD136982             [                                                                                                 TGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGAATATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD177836             [                                                                                                      AATATAAGCATCTGCAGTGGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGACCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD147248             [                                                                                                                   GCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTACAGTTGCACTATGAAGACTGCGTGGAGCCGGCAGATCTCCACTAACGATAGGTTTGATCCATGTCATAGTATCAATTTCTAATTGCCAAAGATCCCCAAGTCGATTACCGGACATGCCACCATATACCAAAAGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD197682             [                                                                                                                                                                                                                                                                                                ACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACACTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTACAGTTGCACTATGAAGACTGCGTGGAGCCGGCAGATCTCCACTAACGATAGGTTTGATCCATGTCATAGTATCAATTTCTAATTGCCAAAGATCCCCAAGTCGATTACCGGACATGCCACCATATACCANAAGACGCCATTTCTTTACCATTCCATCAGGNACCCTGAT AGCTACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD198530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTATCAATTTCTAATTGCCAAAGATCCCCAAGTCGATTACCGGACATGCCACCATATACCAAAAGACGCCATTTCTTTACCATTCCATCAAGGA CCTGATAAGCTACTGCACTGTGAGATTCTCTAGGTGTAGGCGGCTGACCATATGTGTTTGGGATATCCCAACACATAGTACTTGAATTAGGTTTTAATTCCAGAGTGTACAGATCGTTTAAGTATCTTGGTATATTGTTTTTAGGGTCATCACTATCATTTGTTATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCC                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD150620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TACTGCACTGTGAGATTCTCTAGGTGTAGGCGGCTGACCATATGTGTTTGGGATATCCCAACACATAGTACTTGAATTAGGTTTTAATTCCAGAGTGTACAGATCGTTTAAGTATCTTGGTATATTGTTTTTAGGGTCATCACTATCATTTGTTATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGT                                                                                                                                                                                                                                                               ]
[+] EMBL CD187274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGA                                                                         ]
[+] EMBL CD187358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCCACCAAATAGAGATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGT                                                                                    ]
[+] EMBL CD186904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCAACAACAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGA                                                                         ]
[+] EMBL CD187241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAGACTATGCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAGCATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGA                                                                         ]
[-] EMBL CD187060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGAT CTTGGGCAATGGACAGGGGCCCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTGTTAGTTCGTATAAGTCACCTGAATATTTCCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAGCATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAG                                                                        ]
[+] EMBL CD184984             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCCGATCCTTGGGC ATGGACAGGGG CCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTG TAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCAGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCACCTAACGATAGGACCTACACCAGCCATCTTGGAAA   ]
[-] EMBL CD161775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTCAAGCATGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCATCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCTACCTAACGATAGGACCTACACCAGCCATCTT        ]
[+] EMBL CD094139             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAGAACACTAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATTCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTACTAGCCACAGCTTTGT                                                                                          ]
[+] EMBL CD166298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACCACCAAAAACCACGATCAATTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCACCTAACGATAGGACCTACACCAGCCATCTTGGAAAGCG]


>consensus_11144#0 GGTGCGACTCTGCTAGGCCCGCGGCGNAATTCACTAGTGATTGGATGGAAGGGAATGTGT TGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGT AGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCT TGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATT ATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGC TACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACATTCGTCAGCGACTTCCATTGT CAATGGTTCCCAAGCCATTGTGTCAAGATTGAGACTAGCCAAAGTATTTGTACACTTCCA TTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCATGACCAAAGGAACCCATCCACCGAA GACAAACATTCGGTTTCCGATTACAGTTGCACTATGAAGACTGCGTGGAGCCGGCAGATC TCCACTAACGATAGGTTTGATCCATGTCATAGTATCAATTTCTAATTGCCAAAGATCCCC AAGTCGATTACCGGACATGCCACCATATACCAAAAGACGCCATTTCTTTACCATTCCATC AGGNACCCTGATAGCTACTGCACTGTGAGATTCTCTAGGTGTAGGCGGCTGACCATATGT GTTTGGGATATCCCAACACATAGTACTTGAATTAGGTTTTAATTCCAGAGTGTACAGATC GTTTAAGTATCTTGGTATATTGTTTTTAGGGTCATCACTATCATTTGTTATCCCACCAAA TAGAAATGCTCGTTGACCAACAAGAGTAAAACTATGCCCGATCCTTGGGCATGGACAGGG GCCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCCACTCCCAACGAGAGGCTTGTAGTTC GTATAAGTCACCTGAATATTTGCCGTATTCAAGCATGCCACCAAACATGAGAACACGAGT GTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGG TAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATT CCCACCACCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGA TCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCACCTAACGATAGGACCTACACC AGCCATCTTGGAAAGCG



consensusID : consensus_11144#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1128
fasta sequence
                              [TACTTGGATCATTTGCATTACCATGAGTTGAATCATATGGATCCCGTCGGACTAAGGTTACCTGTGTTTGATTTGCTTGTCGTATTATTTGGCTAGTAGCACCTCCAGAAGATAAGTACAAATTTGATGATGCAGGAATGGCAGCTGATGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGCATACACCACCACCAGCAATTAAAATAGGTTTACCAGATGCAGACATTTGAAGCATCGTTGCTGGAATAGCTTTGATTACTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATTAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTTGAATTAACTACACCAGAGTTATTTGCGACAGAAACTGCGGAAACCACTTGCTTGCCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT-ACAGTTGCGATAGTTGCCGTCCGTCCTGTAACAGCACTGCCTGG-CACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAGCCTATAAGTCGCAGGACAGCAGTCCAGTC]

[-] EMBL BG931051             [TACTTGGATCATTTGCATTACCATGAGTTGAATCATATGGATCCCGTCGGACTAAGGTTACCTGTGTTTGATTTGCTTGTCGTATTATTTGGCTAGTAGCACCTCCAGAAGATAAGTACAAATTTGATGATGCAGGAATGGCAGCTGATGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD121775             [                                                                             TGTCGTATTATTTGGCTAGTAGCACCTCCAGAAGATAAGTACAAATTTGATGATGCAGGAATGGCAGCTGATGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGCATACACCACCACCAGCAATTAAAATAGGTTTACCAGATGCAGACATTTGAAGCATCGTTGCTGGAATAGCTTTGATTACTTCCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATTAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTTGAATTAACTACACCAGAGTTATTTGCGACAGAAACTGCGGAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD153012             [                                                                                           GCTGGTAGCACCTCCAGAAGATAAGTACAAATTTGATGATGCAGGAATGGCAGCTGATGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGCATACACCACCACCAGCAATTAAAATAGGTTTACCAGATGCAGACATTTGAAGCATTGTTGCTGGAATAGCTTTGATTACTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGCAGTTGAAACTAGTTTAATAGGTTTAATCAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTCGAATTAACTACACCAGAGTTATTTGCGACAGANACTGCGGAAACCACTTGCTTACCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT ACAGNTGCGATAGTTGCCGTCCGTCCTGTAACAGCACTGCCTGGCCACA GTGTGATCTTTAAACCTGTC GTGTAACTACAGTCGGGTCTCTCTGCCC GCCATAGTG CGCATGAGTTTGta                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD086235             [                                                                                                                                                  cagGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGCNTACACCACCACCAGCAATTAAAATAGGTTTACCAGATGCAGACATTTGAAGCATTGTTGCTGGAATAGCTTTGATTACTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGCACAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATCAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTCGAATTAACTACACCAGAGTTATTTGCGACAGATACTGCGGAAACCACTTGCTTACCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACTTGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT ACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD124231             [                                                                                                                                                                                                                                                                        TAGGTTTACCAGATGCAGACATTTGAAGCATCGTTGCTGGAATAGCTTTGATTACTTTCGGAATTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTAGAAGCAGCTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATTAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTTGAATTAACTACACCAGAGTTATTTGCGACAGAAACTGCGGAAACCACTTGCTTGCCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT ACAGTTGCGATAGTTGCCGTCCGTCCTGTAACAGCACTGCCTGG CACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCT                                                                                                                                                                                                                                                                             ]
[-] EMBL CD162872             [                                                                                                                                                                                                                                                                         AGGTTTACCAGATGCAGACATTTGAAGCATCGTTGCTGGAATAGCTTTGATTACTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATTAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTTGAATTAACTACACCAGAGTTATTTGCGACAGAAACTGCGGAAACCACTTGCTTGCCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT ACAGTTGCGATAGTTGCCGTCCGTCCTGTAACAGCACTGCCTGG CACAGGTGTGATCTTTAAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD197286             [                                                                                                                                                                                                                                                                                                                              CTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTACAGTGATGGTTTTGGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTTTAATTAAACCGGTTGACTTGTTTACAATGTGTGCTACTTGATTTGGATTCGAATTAACTACACCAGAGTTATTTGCGACAGAAACTGCGGAAACCACTTGCTTGCCACCAACAGTAATAAGATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGATTAACTCCACTAGAATGTTGTGCT ACAGTTGCGATAGTTGCCGTCCGTCCTGTAACAGCACTGCCTGG CACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAG                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD132450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGTGCTCACAGTTGCGATAGTTTCCGTCCGTCCTGTAACAGCACTTCCTGG CACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGAGGCGCATGAGTTTGGTATCATTGAACCA                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD132782             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATAGAACTCTTGTCGGAGCAGCAGGGCGATCAGTT                                     ]
[+] EMBL CD190260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAAT                                                                                                                                                                                                                                           ]
[-] EMBL CD190278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAGCCTATAAGTCGCAGGACAGCAGTCCAGTC]
[+] EMBL CD163240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCAATCTGATAGGGGTTGGTATTGGAACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAGATAGCACCAGCTCTCGAGAAGTTCAGAGAACCAGCAGATGCGGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCATGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGA                                                                   ]


>consensus_11144#1 TACTTGGATCATTTGCATTACCATGAGTTGAATCATATGGATCCCGTCGGACTAAGGTTA CCTGTGTTTGATTTGCTTGTCGTATTATTTGGCTAGTAGCACCTCCAGAAGATAAGTACA AATTTGATGATGCAGGAATGGCAGCTGATGAGGATATTGTTGGACTCATGATAACTATTT GCTGTCCAGTTGGTCTGTGTACAGGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGC ATACACCACCACCAGCAATTAAAATAGGTTTACCAGATGCAGACATTTGAAGCATCGTTG CTGGAATAGCTTTGATTACTTTCGGAACTGAAACGCCAGTTCCAACTGATGCTTGTTGTA CAGTGATGGTTTTAGAAGCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTTTAATAGGTT TAATTAAACCGGTTGACTTGTTTACAATGTGTACTACTTGATTTGGATTTGAATTAACTA CACCAGAGTTATTTGCGACAGAAACTGCGGAAACCACTTGCTTGCCACCAACAGTAATAA GATGTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGATTGTCGGACCACATGGAT TAACTCCACTAGAATGTTGTGCTACAGTTGCGATAGTTGCCGTCCGTCCTGTAACAGCAC TGCCTGGCACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTCGGTCCTCTCTGCC CAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAGTAGGCA ATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGAGGGCCT GTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTT TAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAG GAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCC AAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAG GGCGATCAGTTTCCAAAAGCCTATAAGTCGCAGGACAGCAGTCCAGTC



consensusID : consensus_11144#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 596
fasta sequence
                              [GCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGT-ACAA-ACGACTGTGAACAGCTACCATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCANCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCAACTAACGATAGG]

[+] EMBL CD200570             [GCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGT ACAA ACGACTGTGAACAGCTA                                                                                                                                                                                                                            ]
[+] EMBL CD132434             [       tgtGTCTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCGCGACCAGA CAAACGT ACAA ACGACTGTGAACAGCTAC                                                                                                                                                                                                                           ]
[+] EMBL CD118386             [                                                                                                                                                                ACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCCTCATTCCCACCANCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCAACTAACGATAGG]


>consensus_11144#2 GCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGA GAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGAT GTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATA TAAGCATCTGCAGTAGGCACCGAACCCCAAGTTACTTCGAGGCTTTGAGTGCCAGCACGA ACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTG AAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAA CGACTGTGAACAGCTACCATCCCGAAGGCTGCACATCCTGGCGGAATATCTCCGTGTACA GCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGAAGTTCGTCTACTATTCCC TCATTCCCACCANCAAAAACCACGATCAAGTCCTTAATAGCCACAGCTTTGTGTCCGTGT CTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCCTCCAACTAACGATAGG



consensusID : consensus_11144#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 407
fasta sequence
                              [TAATTAGTTCGTGCTGCACTCAAAGCCTGATAACTGGGGTTCGGGCCTATGAGAGCTATATTGCAATCCAAATATGAGTTTTAAAACAAAAAAAAAAAATTTTGGGGGAAATNTTCACCAGTAAATACAAGTGGAATTGTTAAAGCTCCATTAACTGCATCTGCTGGTTCCCTGAACTTCTCAAGAGCTGGTGCTATTTCACAGGCCCTCATTACCACACCGGCTACTGCTAATTCGGTCCCAATACCAACCCCTATCAGATTGCCTACTACTACTGCCGCTGTTGGTTCAATGATACCAAACTCATGCGTCACTATGGCTGNGCAGAGAGGACCGACTGTAGTTACACCGACAGGTTTAAAGATCACACCTGTGCNCAGCAGTGCTGTTACAGGACGGACGGCAAC]

[+] EMBL CD164808             [TAATTAGTTCGTGCTGCACTCAAAGCCTGATAACTGGGGTTCGGGCCTATGAGAGCTATATTGCAATCCAAATATGAGTTTTAAAACAAAAAAAAAAAATTTTGGGGGAAATNTTCACCAGTAAATACAAGTGGAATTGTTAAAGCTCCATTAACTGCATCTGCTGGTTCCCTGAACTTCTCAAGAGCTGGTGCTATTTCACAGGCCCTCATTACCACACCGGCTACTGCTAATTCGGTCCCAATACCAACCCCTATCAGATTGCCTACTACTACTGCCGCTGTTGGTTCAATGATACCAAACTCATGCGTCACTATGGCTGNGCAGAGAGGACCGACTGTAGTTACACCGACAGGTTTAAAGATCACACCTGTGCNCAGCAGTGCTGTTACAGGACGGACGGCAAC]


>consensus_11144#3 TAATTAGTTCGTGCTGCACTCAAAGCCTGATAACTGGGGTTCGGGCCTATGAGAGCTATA TTGCAATCCAAATATGAGTTTTAAAACAAAAAAAAAAAATTTTGGGGGAAATNTTCACCA GTAAATACAAGTGGAATTGTTAAAGCTCCATTAACTGCATCTGCTGGTTCCCTGAACTTC TCAAGAGCTGGTGCTATTTCACAGGCCCTCATTACCACACCGGCTACTGCTAATTCGGTC CCAATACCAACCCCTATCAGATTGCCTACTACTACTGCCGCTGTTGGTTCAATGATACCA AACTCATGCGTCACTATGGCTGNGCAGAGAGGACCGACTGTAGTTACACCGACAGGTTTA AAGATCACACCTGTGCNCAGCAGTGCTGTTACAGGACGGACGGCAAC



consensusID : consensus_11144#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence
                              [GCTTTAGACGTTTCCACTCCCAACTAGAGGCTTTGAGTGCCAGCACGAACTAATTGAACCCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGGTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACAT]

[-] EMBL CD178157             [GCTTTAGACGTTTCCACTCCCAACTAGAGGCTTTGAGTGCCAGCACGAACTAATTGAACCCTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGATTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACAGGTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACAT]


>consensus_11144#4 GCTTTAGACGTTTCCACTCCCAACTAGAGGCTTTGAGTGCCAGCACGAACTAATTGAACC CTTGTCGGAGCAGCAGGGCGATCAGTTTCCAAAAACCATAAGTCTTTGAAGCAAACCTGA TTATTCCATGCTTTTCTATATCCATCACGACCAGACCAAACGTACAAACGACTGTGAACA GGTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAAGACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11144#0      ------------------------------------------------------------
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      GCAGTAGCCGGTGTGGTAATGAGGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGA 60
consensus_11144#1      ------------------------------------TACTTGGATCATTTGCATTACCAT 24
consensus_11144#3      --------------------TAATTAGTTCGTGCTGCACTCAAAGCCTGATAACT--GGG 38
                                                                                   

consensus_11144#0      ------------------GGTGCGACTCTGCTAGGCCCGCGGCGNAATTCACTAGTGATT 42
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      GAACCAGCAGATGCAGTTAATGGAGCTTTAACAATTCCAC--TTGTATCTACTGGTGA-- 116
consensus_11144#1      GAGTTGAATCATATGGATCCCGTCGGACTAAGGTTACCTGTGTTTGATTTGCTTGTCGTA 84
consensus_11144#3      GTTCGGGCCTATGAGAGCTATATTGCAATCCAAATATGAGTTTTAAAACAAAAAAAAA-A 97
                                                                                   

consensus_11144#0      GGATGGAAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAA 102
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      AGATGTCAGGGAATGTGTTGAAGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAA 176
consensus_11144#1      TTATTTGGCTAGTAGCACCTCCAGAAGATAAGTACAAATTTGATGATGCAGGAATGGCAG 144
consensus_11144#3      AATTTTGGGGGAAATNTTCACCAGTAAATACAAGTGGAATTGTTAAAGCTCCATTAACTG 157
                                                                                   

consensus_11144#0      AATATAAGCAT-CTGCAGTAGGCACCGA-ACCCCAAGTTACTTCGAGGCTTTGAGTGCCA 160
consensus_11144#4      --------------GCTTTAGACGTTTCCACTCCCAACTA----GAGGCTTTGAGTGCCA 42
consensus_11144#2      AATATAAGCAT-CTGCAGTAGGCACCGA-ACCCCAAGTTACTTCGAGGCTTTGAGTGCCA 234
consensus_11144#1      CTGATGAGGATATTGTTGGACTCATGATAACTATTTGCTGTCCAGTTGGTCTGTGTAC-A 203
consensus_11144#3      CATCTGCTGGT-TCCCTGAACTTCTCAAGAGCTGGTGCTATTTCACAGGCCCTCATTACC 216
                                          *         *        *        *       *    

consensus_11144#0      GCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCA--GTTTCCAAAAACCATA 218
consensus_11144#4      GCACGAACTAATTGAACCCTTGTCGGAGCAGCAGGGCGATCA--GTTTCCAAAAACCATA 100
consensus_11144#2      GCACGAACTAATTGAACTCTTGTCGGAGCAGCAGGGCGATCA--GTTTCCAAAAACCATA 292
consensus_11144#1      GGACCTGAAACTTGAACGGTTGTCTGGCCCGGACGGCATACACCACCACCAGCAATTA-A 262
consensus_11144#3      ACACCGGCTACTGCTAATTCGGTCCCAATACCAACCCCTATCAGATTGCCTACTACTA-- 274
                         **     * *   *     ***        *   *           **    *  *  

consensus_11144#0      AGTCTTTGAAGCAAACCTGATTATTCCATGCTT---TTCTATATCCATCACGACCAGACC 275
consensus_11144#4      AGTCTTTGAAGCAAACCTGATTATTCCATGCTT---TTCTATATCCATCACGACCAGACC 157
consensus_11144#2      AGTCTTTGAAGCAAACCTGATTATTCCATGCTT---TTCTATATCCATCACGACCAGACC 349
consensus_11144#1      AATAGGTTTACCAGATGCAGACATTTGAAGCATCGTTGCTGGAATAGCTTTGATTACTTT 322
consensus_11144#3      --CTGCCGCTGTTGGTTCAATGATACCAAACTC-----ATGCGTC-ACTATGGCTGNGCA 326
                                             **   *  *        *           *        

consensus_11144#0      AAACGTACAAACGACTGTGAACAGCTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAA 335
consensus_11144#4      AAACGTACAAACGACTGTGAACAGGTACAGCACAATGTCCAGCGCGGGCTCGAGGTAGAA 217
consensus_11144#2      AAACGTACAAACGACTGTGAACAGCTACCATCCCGAAGGCTGCACATCCT---GGCGGAA 406
consensus_11144#1      CGGAACTGAAACGCCAGTTC-CAACTGATGCTTGTTGTACAGTGATGGTTT----TAGAA 377
consensus_11144#3      GAGAGGACCGACTGTAGTTA-CACCGACAGGTTTAAAGATCACACCTGTGCNCAGCAGTG 385
                                 **    **   **                                  *  

consensus_11144#0      GACATTCGTCAGCGACTTCCATTGTCAATGGTTCCCAAGCCATTGTGTCAAGATTGAGAC 395
consensus_11144#4      GACAT------------------------------------------------------- 222
consensus_11144#2      TATCTCCGTGTACAG---CGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGTGA- 462
consensus_11144#1      GCAGTTGAAGATGAAGTTGTAGTTGAAACTAGTT-TAATAGGTTTAATTAAACCGGTTGA 436
consensus_11144#3      CTGTTACAGGACGGACGGCAAC-------------------------------------- 407
                           *                                                       

consensus_11144#0      TAGCCAAAGTATTTGTACACTTCCATTCTTTTTCTTGAGCTGTCATTTTAATTTCTTCCA 455
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      -AGTTCGTCTACT---ATTCCCTCATTCCCACCANCAAAA-ACCACGATCAAGTCCTTAA 517
consensus_11144#1      CTTGTTTACAATGTGTACTACTTGATTTGGATT-TGAATTAACTACACCAGAGTTATTTG 495
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      TGACCAAAGGAACCCATCCACCGAAGACAAACATTCGGTTTCCGATTACAGTTGCACTAT 515
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      TAGCCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTT 577
consensus_11144#1      CGACAGAAACTGC------------GGAAACCACTTGCTTGCCACCAACAGTAATAAGAT 543
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GAAGACTGCGTGGAGCCGGCAGATCTCCACTAACGATAGGTTTGATCCATGTCATAGTAT 575
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      TCCTCCAACTAACGATAGG----------------------------------------- 596
consensus_11144#1      GTTGCTTTGGAGCGATTGGAGGACATGAACTTCGGATGA--TTGTCGGACCACATGG-AT 600
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      CAATTTCTAATTGCCAAAGATCCCCAAGTCGATTACCGGACATGCCACCATATACCAAAA 635
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      TAACTCC-----ACTAGAATGTTGTGCTACAGTTGCGATAGTTGCCGTCCGTCCTGTAAC 655
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GACGCCATTTCTTTACCATTCCATCAGGNACCCTGATAGCTACTGCACTGTGAGATTCTC 695
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      AGCACTGCCTGGCACAGGTGTGATCTTTAAACCTGTCGGTGTAACTACAGTC-GGTCCTC 714
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      TAGGTGTAGGCGGCTGACCATATGTGTTTGGGATATCCCAACACATAGTACTTGAATTAG 755
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      TCTGCCCAGCCATAGTGACGCATGAGTTTGGTATCATTGAACCAACAGCGGCAGTAGTAG 774
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GTTTTAATTCCAGAGTGTACAGATCGTTTAAGTATCTTGGTATATTGTTTTTAGGGTCAT 815
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      TAGGCAATCTGATAGGGGTTGGTATTGGGACCGAATTAGCAGTAGCCGGTGTGGTAATGA 834
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      CACTATCATTTGTTATCCCACCAAATAGAAATGCTCGTTGACCAACAAGAGTAAAACTAT 875
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      GGGCCTGTGAAATAGCACCAGCTCTTGAGAAGTTCAGAGAACCAGCAGATGCAG-----T 889
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GCCCGATCCTTGGGCATGGACAGGGGCCATTTCTAGCAGGCTTAGGCTTTAGACGTTTCC 935
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      TAATGGAGCTTTAACAATTCCACTTGTATCTACTGGTGAAGATGTCAGGGAATGTGTTGA 949
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      ACTCCCAACGAGAGGCTTGTAGTTCGTATAAGTCACCTGAATATTTGCCGTATTCAAGCA 995
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      AGTTGTGGAAGGAGAAACATCATACTTTTGAATCTGCAAAATATAAGCATCTGCAGTAGG 1009
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      TGCCACCAAACATGAGAACACGAGTGTTTTCTGCCAACATCCCGAAGGCTGCACATCCTG 1055
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      CACCGAACCCCAAGTTACTTCGAG-GCTTTGAGTGCCAGCACGAACTAATTGAACTCTTG 1068
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GCGGAATATCTCCGTGTACAGCGGGTAGAAACCATTGGCAAGTTGTCGTATTAAACACGT 1115
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      TCGGAGCAGCAGGGCGATCAGTTTCCAAAAGCCTATAAGTCGCAGGACAGCAGTCCAGTC 1128
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      GAAGTTCGTCTACTATTCCCTCATTCCCACCACCAAAAACCACGATCAAGTCCTTAATAG 1175
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      ------------------------------------------------------------
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      CCACAGCTTTGTGTCCGTGTCTTGATCGAGGGACATTCCCAGTGGCCGCTGAAACTTTCC 1235
consensus_11144#4      ------------------------------------------------------------
consensus_11144#2      ------------------------------------------------------------
consensus_11144#1      ------------------------------------------------------------
consensus_11144#3      ------------------------------------------------------------
                                                                                   

consensus_11144#0      TCCACCTAACGATAGGACCTACACCAGCCATCTTGGAAAGCG 1277
consensus_11144#4      ------------------------------------------
consensus_11144#2      ------------------------------------------
consensus_11144#1      ------------------------------------------
consensus_11144#3      ------------------------------------------
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)