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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 1752 fasta sequence
[GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT-TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC-GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACC-AAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT-AGAAT-CCCTAATTTTTTGA-GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG-TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAGCTGACCAATGGTGTTTTT]
[+] EMBL CD202970 [GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATT ]
[-] EMBL CD161630 [ AAGGACATGCGTATTAAGACGGCTGATGTAACTGCTCCGAAGGCAAGCAGCTTTGAAGACTTTTG TTGAACAGAGATATCTTGAAGGGTATATCCGACAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATCATGGCAAGAGCCAAGTATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCATGTATCAATTCATACTACACTCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTCGCTCTTCAAAGTACCCAGATCTGTATAGCACTTGCCAAACATACGGTTATTAAAATCATGATGGTAATCGGTGGCACACTGCTTAAAGATGATTTGATAAGAGTAAGTCCAACCGTTCATGTTTTAATCGGTAATCATGGTCGTATAGTAGACTTATTAAGCAGGGGATTCATCTAACATATCCAAGTGTAAAATCGT ]
[-] EMBL CD161632 [ AAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGT ]
[+] EMBL CD094498 [ GGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAA ]
[-] EMBL CD164445 [ CTTTGAAGGGAAGCAGCTCTGAAGACTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGC ]
[+] EMBL CD072642 [ GAAAAAGGTTGGGAGTCCCCGTCCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAGACATACGGCTATTAA ]
[+] EMBL CD072592 [ CCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTANAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACT ]
[+] EMBL CD072629 [ CCCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGCCAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCNAGTGT ]
[+] EMBL CD182216 [ ggtgGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATG ]
[+] EMBL CD182264 [ ggtgGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATGGAACTTGCCAAACATACGGCTATTAAAATCATG ]
[+] EMBL CD182327 [ TGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTATCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATG ]
[-] EMBL CD182253 [ GGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATACTACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAACTAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGC ]
[+] EMBL CD188778 [ AAATCATGCTGGTAATTGGTGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGGTACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCAT TGACATATCCAAGTGTAAAATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAGAAATCACCCAGTTGGGATATTCCTGTTATTATATACATG ]
[+] EMBL CD084120 [ acgaggGAGATTCTCAATGGTGTGGATAAACGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCTGCAATCCCTACCATATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCCAAAAAATCACCCAGTTGGGATATTCCTGTCATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTG ]
[+] EMBL AI977431 [ AAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGC GCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTNTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGCTTTGGTCATTTGGGCATTGCCATAAACTTGGgt ]
[-] EMBL CD155163 [ TTTGC GCGATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTC ]
[-] EMBL CD111001 [ CGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAAGGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTGTAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTGTTATTATATACATGCACGGATGTCTCAGCAGGACCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGCACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAAT ]
[+] EMBL CD066649 [ CAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGCACCAAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCANGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTT ]
[-] EMBL CD183862 [ AACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGNTGCGGAGTACC AAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCA ]
[+] EMBL SMAA18497 [ TGCGGAGTACC AAAATGAAAATAATTTGGNTCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTTAAGAATCCCCNAATTTTTTGANGTT ]
[-] EMBL CD157631 [ CTGTTTAATGGTCGT GGTGCCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCNCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTT ]
[-] EMBL CD144538 [ TGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACCTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCT ]
[-] EMBL CD196884 [ GTTATATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCGCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ]
[-] EMBL CD141659 [ TGGTCGTGGGTTGCCTTCAGGCAACAAGGATGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACT ]
[-] EMBL CD140466 [ AATCATGAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGACGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGCTATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTCTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCGCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ]
[-] EMBL CD140510 [ TATATATGACTTCCCGGTGACTTCTGGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGCATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTGCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ]
[-] EMBL CD140442 [ GGGCATTTACCTAAGATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTTAGGTNATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCNATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTC ]
[+] EMBL CD202741 [ ATGCTCGCCACTTT AGAAT CCCTAATTTTTTGA GTTAAGGTTATCCCTATTATTTTCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTnt ]
[-] EMBL CD157777 [ T AGAAT CCCTAATTTTTTGA GTTTAGGTTATCCCTATTATTTTCTTTGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTGCCATCTGTCCTTTTCAG TTGGGATTTGTTTTTTCAAACGTTTATTTTTTTGTTATTATAATTAACCCTAACC ]
[-] EMBL CD157623 [ TCTTCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTCAATTTTTCCCATCTGTCCTTTTCAG TTGGGATNTGTTTTTTCAAATGTTTA TTTTATGTTATTATAATTAACCCTAACC ]
[-] EMBL CD138469 [ TCGTGATATGCTGTATAGTTTAATTTTTCNCATCTGTCC TTTCAGTTTGGGATTTGTTNTTTCAAATGTTTATTTTTTTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCT ]
[-] EMBL AI067853 [ GTGATATGCTGTGTAGGTTAATTTTTCCCATCTGTCCTTTTCAG TTGGGAGTTGTTTTTTCAAATGTTTAGTTGTGTGTTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAGCTGACCAATGGTGTTTT ]
[-] EMBL AI068069 [ TTTCTCAAATGTTTATACTGGTGGTATTATAATTAACCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCGTTGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTAGTCGCCACCCACCCCATATTCTGTATGTGGTCAGTGTTGCCCTCATTAGCTTGCTCTTGGCTGTTGTTATTAGCCAGGAAGCTGACCAATGGTGTATTT]
[-] EMBL CD141358 [ anCCCTACCCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATGTTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTCGAAAGTCCCCTGTGGCTTTGTAGCATCCAAATGATGGCTTCGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTCTGTATGTGGT ]
consensusID : consensus_11156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 426 fasta sequence
[TCGGCACCCAATGCTACTCTCGGGATCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACCAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGATGTTGTAAACAATCATT]
[+] EMBL CD062670 [TCGGCACCCAATGCTACTCTCGGGATCGCAACAGAGTCTTTCATGATTTTCGGAATGGTTGCTGCCGCAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACATTCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCATCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTATGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAAATCAAACCAATTCCTAAAGAAATCGACAAGCGGTTATATGTTGCGGAGTACCAAAATGAAAATAATTTGGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGATGATGTTGTAAACAATCATT]
consensusID : consensus_11156#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence
[TCGCGGCCAAAAATTCGTTCCGAGGGTTGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGATTACTGAATATTATGCATATGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC]
[+] EMBL CD078038 [TCGCGGCCAAAAATTCGTTCCGAGGGTTGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGAAGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCCAGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAATGGAGACATTAACGTTGAAAGGATTACTGAATATTATGCATATGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11156#0 GAAGGACATGCGTATTAAGACGGCTGATGTAACTGCTTTGAAGGGAAGCAGCTTTGAAGA 60
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CTTTTGTTTGAAGAGAGATATCTTGAAGGGTATATACGAAAAAGGTTGGGAGTCCCCGTC 120
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CCCTATTCAAGAATCCAGCATACCAATAGCGCTAACGCACAGAGATATAATGGCAAGAGC 180
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CAAGAATGGCACTGGCAAAACTGGAGCTTATTCAGTCCCTGTCCTTGAATCAATCGATAC 240
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TACAATCAACAAAATTCAGGCTATTATTTTGGTACCCACTCGAGAACTTGCACTTCAAAC 300
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TAGCCAGATCTGTATAGAACTTGCCAAACATACGGCTATTAAAATCATGCTGGTAATTGG 360
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TGGCACACTGCTTAAAGATGATTTGATAAGACTAAGTCAAACCGTTCATGTTTTAATCGG 420
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TACTCCTGGTCGTTTAGTAGACTTACTAAGCAGGGGACTCATTGACATATCCAAGTGTAA 480
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 AATTGTTGTTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAAGTGGAGTCGA 540
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 AGAGATTCTCAATGGTGTGGATAAAAGTCGCCAAGTTCTCGTTTACTCAGCAACGTACCC 600
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 AGTTACAGTTCAGTCATTTATGAATCAGCATTTGCGCAATCCCTACCAAATAAATTTAAT 660
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 GGAGACATTAACGTTGAAAGGAATTACTGAATATTATGCATATGTACAGGAAAAACATAA 720
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 GGTACACTGCTTGAATACATTGTTTTCCAAACTACAGATCAGCCAGTCCATAATTTTCTG 780
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TAGTTCAGCACAACGAGTCGAACTTCTTGCCAAAAAAATCACCCAGTTGGGATATTCCTG 840
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TTATTATATACATGCACGGATGTCTCAGCAGGACCGCAAC--AGAGTCTTTCATGATTTT 898
consensus_11156#1 ------TCGGCACCCAATGCTACTCT--CGGGATCGCAAC--AGAGTCTTTCATGATTTT 50
consensus_11156#2 ---------------------------------TCGCGGCCAAAAATTCGTTCCGAGGGT 27
*** * * * * * ** *
consensus_11156#0 CGGAATGGTTGCTGCCG-CAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACAT 957
consensus_11156#1 CGGAATGGTTGCTGCCG-CAACCTTGTTTGTACAGACCTTTTGACTCGTGGAATTGACAT 109
consensus_11156#2 TGCTCTTGATGAAGCAGACAAACTACTGTCTGAAGAGCTCATAA---GTGGAGTCGAAGA 84
* * * ** ** * *** ** * * * *** ** * * ***** * **
consensus_11156#0 TCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCA 1017
consensus_11156#1 TCCGACTGTGAATGTTGTTATAAATTTTGACTTCCCAAAATATTCTGAAACCTATTTGCA 169
consensus_11156#2 ---GATTCTCAATGGTGTGGATAA-----AAGTCGCCAAGTTCTCGTTTACTCA---GCA 133
** * * **** *** ** * ** * ** * ** ** * ***
consensus_11156#0 TCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTA 1077
consensus_11156#1 TCGTATTGGTAGATCTGGTCGTTTTGGTCATTTGGGCATTGCCATAAACTTGGTTACGTA 229
consensus_11156#2 ACGTACC--CAGTTACAGT----TCAGTCATTTATGAATCAGCATTTGCGCAATCCC--- 184
**** ** * ** * ******* * ** *** * * *
consensus_11156#0 TGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAA-ATCAAACCAA 1136
consensus_11156#1 TGCCGATAGATATTCATTAAAAACAGTGGAAACAGAACTGGTTACTGAA-ATCAAACCAA 288
consensus_11156#2 TACCAA-ATAAATTTAATGGAGACATTA-ACGTTGAAAGGATTACTGAATATTATGCATA 242
* ** * * * *** * * * *** * * *** * ******** ** * * *
consensus_11156#0 TTCCTAAAGAAATCGACAAGCGGTTATATGT-TGCGGAGTA-CCAAAATGAAAATAATTT 1194
consensus_11156#1 TTCCTAAAGAAATCGACAAGCGGTTATATGT-TGCGGAGTA-CCAAAATGAAAATAATTT 346
consensus_11156#2 TGTACAGGAAAAACATAAGTACACTGCTTGAATACATTGTTTCCAAACTACAGATC---- 298
* * *** * * * ** * * ** ***** * * **
consensus_11156#0 GGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGA 1254
consensus_11156#1 GGATCCAATGACAAGAGAGGCGCTGTTTAATGGTCGTGGGTTGCCTTCAGGCAACAAGGA 406
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TGAGGTTGTAAACAATCATTAATATATATGACTTCCCGGTGACTTCTGGGCATTTACCTA 1314
consensus_11156#1 TGATGTTGTAAACAATCATT---------------------------------------- 426
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 AGATGCTCGCCACTTTAGAATCCCTAATTTTTTGAGTTTAGGTTATCCCTATTATTTTCT 1374
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TCGCAGCTTCAATGAATCCATTCCCACTCGTGATATGCTGTATAGTTTAATTTTTCCCAT 1434
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CTGTCCTTTTCAGTTGGGATTTGTTTTTTCAAATGTTTATTTTTTTGTTATTATAATTAA 1494
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CCCTAACCAGAACTCCCCGTTCCCCTGTATTATATCCCAAATGTACAGTTAGCTTATATG 1554
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TTCATGATATTAATGAATGTTTGCCATCCGTGTCGCTTTGAAAGTCCCCTGTGGCTTTGT 1614
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 AGCATCCAAATGATGGCTTTGAGGAGTGTTTTGGATCTACTCGCCACCCACCCCATATTC 1674
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 TGTATGTGGTCAGTGTTGCCCTCATTCGCTTGCTCTTGGCTGTTGTTATTATCCAGGAAG 1734
consensus_11156#1 ------------------------------------------------------------
consensus_11156#2 ------------------------------------------------------------
consensus_11156#0 CTGACCAATGGTGTTTTT 1752
consensus_11156#1 ------------------
consensus_11156#2 ------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||