These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11202#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 35 consensus length = 1332 fasta sequence [TTTTTTTTTTTTTTTTGCATAATTCCAACTGTTTTATTTTTAATAAATTACAAAATTATTGGGATGCTGTAAATATCAATAAATAACACACTATAAGGGATTAAATTGCTCCTGTTTTGCCAAGTTGTTCTTTTAAAATCATAATGCTGCGTCGTTGATCCTCTGGCAAGAGAGCAAGTTGTTCATCTGATAGCTGAAGAACCTGCATAATAAGTGTGACCTTTTCTTGTTCACCTTGCCCTGCTAGTAAACT-ATTAGGACCCATACTGGCAGCTGCCGCTGCAGCAATTGCAGGGGTAATCTGAGCGGCGGGTGGTCTTTGAGGTCGGACAGCCATATTTGGAGGTCCATTGGGATTGAAATGTGGTTGTTGTCCTGACATAGTAGGTGGCTGTGTCTGACCTGACGGATAGTCATAAGGCGGCTGGGATTGTGGAGCAACAGAATTAGGAGGAAACCCATTAGGTGGCATATTATTTGGATAAAACTTCTGTTGCATTCCTTGAGGTGCTTGACTTCTTTGTGGAACTTGTTCAACACTGAAATGGTTTGGATGTGGAACGGGTCCAGGTCCACCGTGATGTGGAAAGCCGGAGGGGGGCAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG-ATATGACCAGGGAAAGCCA-TA-ACCGGTGCTC-GCATAGAC-GTGTCTTCATC-CGGCATAGCA-GGGGGGATTTGGTCATGACTGCGATTTAGC-AT-AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG-GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA-ATATTATCTCCATATGGGCTT-TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTTTCAGCAGCCTCCTTAGTTAACACGGGAA] [+] EMBL AI395818 [TTTTTTTTTTTTTTTTGCATAATTCCAACTGTTTTATTTTTAATAAATTACAAAATTATTGGGATGCTGTAAATATCAATAAATAACACACTATAAGGGATTAAATTGCTCCTGTTTTGCCAAGTTGTTCTTTTAAAATCATAATGCTGCGTCGTTGATCCTCTGGCAAGAGAGCAAGTTGTTCATCTGATAGCTGAAGAACCTGCATAATAAGTGGGACCTTTTCCTGGTCAACTTGGCCTGGTAAGAAACTAATTAGGCCCAATATGGGAAGTTG CGCT ] [+] EMBL CD077043 [ CAACTGTTTTATTTTTAATAAATTACAAAATTATTGGGATGCTGTAAATATCAATAAATAACACACTATAAGGGATTAAATTGCTCCTGTTTTGCCAAGTTGTTCTTTTAAAATCATAATGCTGCGTCGTTGATCCTCTGGCAAGAGAGCAAGTTGTTCATCTGATAGCTGAAGAACCTGCATAATAAGTGTGACCTTTTCTTGTTCACCTTGCCCTGCTAGTAAACT ATTAGGACCCATACTGGCAGCTGCCGCTGCAGCAATTGCAGGGGTAATCTGAGCGGCGGGTGGTCTTTGAGGTCGGACAGCCATATTTGGAGGTCCATTGGGATTGAAATGTGGTTGTTGTCCTGACATAGTAGGTGGCTGTGTCTGACCTGACGGATAGTCATAAGGCGGCTGGGATTGTGGAGCAACAGAATTAGGAGGAAACCCATTAGGTGGCATATTATTTGGATAAAACTTCTGTTGCATTCCTTGAGGTGCTTGACTTCTTTGTGGAACTTGTTCAACACTGAAATGGTTTGGATGTGGAACGGGTCCAGGTCCACCGTGATGTGGAAAGCCGGAGGGGGGCAAGTGAGACCCAGGT ] [+] EMBL CD095294 [ TGACCTTTTCTTGTTCACCTTGCCCTGCTAGTAAACT ATTAGGACCCATACTGGCAGCTGCCGCTGCAGCAATTGCAGGGGTAATCTGAGCGGCGGGTGGTCTTTGAGGTCGGACAGCCATATTTGGAGGTCCATTGGGATTGAAATGTGGTTGTTGTCCTGACATAGTAGGTGGCTGTGTCTGACCTGACGGATAGTCATAAGGCGGCTGGGATTGTGGAGCAACAGAATTAGGAGGAAACCCATTAGGTGGCATATTATTTGGATAAAACTTCTGTTGCATTCCTTGAGGTGCTTGACTTCTTTGTGGAACTTGTTCAACACTGAAATGGTTTGGATGTGGAACGGGTCCAGGTCCACCGTGATGTGGAAAGCCGGAGGGGGGCAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTANC A ] [-] EMBL CD136174 [ AGCAACAGAATTAGGAGGAAACCCATTAGGTGGCATATTATTTGGATAAAACTTCTGTTGCATTCCTTGAGGTGCTTGACTTCTTTGTGGAACTTGTTCAACACTGAAATGGTTTGGATGTGGAACGGGTCCAGGTCCACCGTGATGTGGAAAGCCGGAGGGGGGCAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAG ] [-] EMBL CD095853 [ agnAGGAGGGCAAGTGAGACNCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTGGTCTGATTG ATATGANCAGGGAAAGCCA TA NCCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCG ] [+] EMBL CD148277 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATATAC GTGTCTTCATC CGGCATAG ] [+] EMBL CD202033 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCATTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAG ] [+] EMBL CD202014 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTACGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTT GCGATGAACGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTA ] [+] EMBL CD202053 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTACGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTT GCGAT AACGATAGCCACTTTGGGATCGGCAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTA ] [+] EMBL CD072117 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATAC AAGTTTCATCTGCTTCATTAGTTCATACAATTGNTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCATATA ] [+] EMBL CD148366 [ CAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATCACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATG CGGCATACTAGGGGGGGATTTGGTCATGACTGCCTTTTACC AT AGCGATAGCCACTTT ] [-] EMBL CD145170 [ AAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGTTGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTGCGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATC ] [-] EMBL CD201908 [ AAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTAT ] [+] EMBL CD202143 [ ctAGTGAGACCCAGGTGAGGATATACGCTTCATATGATTACCTGGAGCATTACGACCCACATGTGTTGTTTGATTGAATATGACCAGGGCAAGCCA TA ACCGGCGCTC GCATATAC GTGTCTTCATC CGGCATACCA GGGGGGATTTGGTCATAACTGCTATCTGTN ATGAAAGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTA ] [+] EMBL CD072114 [ ctAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTANAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGNTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCG ATATTAT ] [-] EMBL CD148314 [ AGTGAGACNCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAATGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCCTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTTTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCGGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCC ] [+] EMBL CD202135 [ ctAGCGAGACCCAGGCGAAGATATACGCATCATATGATTACCTGGAGCCTTACGACCCACATGTGTTGTCTGATTGAATATGACCAGGGCAAGCCA TAGACCGGCGCTC GCATATAC GTGTCTTCATCTCGGCATACCA GGGGGGATTTGGTCATAACTGCTATCT GCNATGAAAGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTA ] [+] EMBL CD202021 [ cttgcGAGACCCAGGCGAAGATATACGCTTCATATGATTACCTGGAGCCTTACGACCCACATGTGTAGCCTGATTGAATATGACCAGGGCAAGCCATTA ACCGGCGCTCAGCATATACAGTGTCTTCATC CGGCATACCA GGGGGGATTTGGTCATAACTGC TTCTGCNAT A AAATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTA ] [+] EMBL CD200809 [ aaACCCGGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAG ] [-] EMBL CD072131 [ AAGATATAGGCATCATATGA TACCTGGAGCA AGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGCAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTAT ] [+] EMBL CD149226 [ AGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTG ATATGACCAGGGAAAGCCA TA ACCGGTGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTANC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTANGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTC ] [-] EMBL CD148357 [ TGCTC GCATAGAC GTGTCTTCATC CGGCATAGCA GGGGGGATTTGGTCATGACTGCGATTTAGC AT AGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTG GAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTAT ] [-] EMBL CD096090 [ ACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCG ] [-] EMBL CD188788 [ TTACGGGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAACTTTGTTCCACAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCT ] [-] EMBL CD111918 [ cAAGTTTCATCTGC TCA TAGTTCATACA TTG TCAGGGTGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATC ] [-] EMBL CD160670 [ TTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGA ] [-] EMBL CD149617 [ TGGATCATAT TTATCTCCATATGGGCTT TCAAGTGGCGGGCATACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCCACGAAGATAGATCGCGCGGTCTTCTCAGat ] [-] EMBL CD110757 [ ATCA ATATTATCTCCATAT GGCTTCAAAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATCCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATC ] [-] EMBL BG930311 [ TCA ATATTATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGaa ] [-] EMBL CD112017 [ ATCTCCATATGGGCTT TCAAGTGGCGGGCCTACAGATGGG TACTTAAAGCCAGTTCAGCAGAGTTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATC ] [-] EMBL CD170278 [ TGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATCTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCCTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGT ] [-] EMBL CD149438 [ AATATTTTGAAGATTCCGCAAAGCACTCGCAGCAATAGGTGGGTTGTTGTATTCACAAAATCCATAGCTTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATC ] [-] EMBL BG930603 [ AGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTTTCAGCAGCCTCCTTAGTTAACACGGGAA] [+] EMBL BG930634 [ TCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCGGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTTTCAGCAGCCTCCTTAGTTAACACGGGAc] [-] EMBL CD149427 [ GCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATCATATACCAAACGGAAACCGATTACAGGACCAGCCTTGCTAAATAGTTCGATAAGCTTTTCCTCAGTCGCTTCATACGGTATGTTGCCTACGAAGATAGATC ] consensusID : consensus_11202#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 620 fasta sequence [NCAGAATTAGAGGGAACCCCATTAGTNGGCATATANNTTGATNAAANCTCTGTGCATTTTCCTGNAGGTGCTGACTTTCNTTGTGGANCTGTCNNANCACTGAAATGNNTTGATGTNGGAACGGGTCCAGGTNCCACCGTGATGTGAAAAGCC-GAGGGGGGCAAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTGATATGACCAGGGAAAGCCATAACCGGTGCTCGCATAGACGTGTCTTCATCCGGCATAGCAGGGGGGATTTGGTCATGACTGCGATTTAGCATAGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTTTCAGCAGCCTCCTTAGTTAACACGGGTGCCGCCATCAAAGCTAACCTTCTGGAAAGATTTTAACTGATATGGACTACGATTTATTAATAAGAAAATGTGTCAAGTGGACTGAAG] [-] EMBL CD111955 [NCAGAATTAGAGGGAACCCCATTAGTNGGCATATANNTTGATNAAANCTCTGTGCATTTTCCTGNAGGTGCTGACTTTCNTTGTGGANCTGTCNNANCACTGAAATGNNTTGATGTNGGAACGGGTCCAGGTNCCACCGTGATGTGAAAAGCC GAGGGGGGCAAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGTTGTCTGATTGATATGACCAGGGAAAGCCATAACCGGTGCTCGCATAGACGTGTCTTCATCCGGCATAGCAGGGGGGATTTGGTCATGACTGCGATTTAGCATAGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTG ] [-] EMBL CD094485 [ CACCGTGATGTGGAAAGCCGGAGGGGGGC AAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCACATGTGCTGTCTGATTGATATGACCAGGGAAAGCCATAACCGGTGCTCGCATAGACGTGTCTTCATCCGGCATAGCAGGGGGGATTTGGTCATGACTGCGATTTAGCATAGCGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTTTCAGCAGCCTCCTTAGTTAACACGGGTGCCGCCATCAAAGCTAACCTTCTGGAAAGATTTTAACTGATATGGACTACGATTTATTAATAAGAAAATGTGTCAAGTGGACTGAAG] consensusID : consensus_11202#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence [CTAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGCGACCTCACAGTGTCGTATGTCTTGTATTGATATCGACNCAGGCGACAATGCCAATAACCTGGTCGCTCAGCATATGACGTAGTCGTTCACTCTCGGCTATACGCAGGCGGTGGATCTATGGTCATTGAACTGCTATTCTGCNATGAACGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTATAGCATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCAATATTA] [+] EMBL CD202037 [CTAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGCGACCTCACAGTGTCGTATGTCTTGTATTGATATCGACNCAGGCGACAATGCCAATAACCTGGTCGCTCAGCATATGACGTAGTCGTTCACTCTCGGCTATACGCAGGCGGTGGATCTATGGTCATTGAACTGCTATTCTGCNATGAACGATAGCCACTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTATAGCATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTATACAAAGTTTCATCTGCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTTCTGGTGCAGCTTGTGGATCAATATTA] consensusID : consensus_11202#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence [TGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATCTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCATTGGGTTTTCCAGACTGTCTATCATATATCAAACGGAAACCGATTACAGGACCATCCTTGCTAAATAGCTCGATAAGCCAGTCCTCTGTCGCCTTATGACGATATATCGCCCACCGTGATAGATCGTGCGGT] [-] EMBL CD170306 [TGGCGGGCCTACAGATGGGTTACTTAAAGCCAGTTCAGCAGAATTTTGTTCCCCAGCAGCTGGTCCGATACGCAGAGGACGGCCATTGAATTCAATATCTTGAAGATTCCGCAAAGCACTCGCAGCAATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCATTGGGTTTTCCAGACTGTCTATCATATATCAAACGGAAACCGATTACAGGACCATCCTTGCTAAATAGCTCGATAAGCCAGTCCTCTGTCGCCTTATGACGATATATCGCCCACCGTGATAGATCGTGCGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11202#0 TTTTTTTTTTTTTTTTGCATAATTCCAACTGTTTTATTTTTAATAAATTACAAAATTATT 60 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GGGATGCTGTAAATATCAATAAATAACACACTATAAGGGATTAAATTGCTCCTGTTTTGC 120 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 CAAGTTGTTCTTTTAAAATCATAATGCTGCGTCGTTGATCCTCTGGCAAGAGAGCAAGTT 180 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GTTCATCTGATAGCTGAAGAACCTGCATAATAAGTGTGACCTTTTCTTGTTCACCTTGCC 240 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 CTGCTAGTAAACTATTAGGACCCATACTGGCAGCTGCCGCTGCAGCAATTGCAGGGGTAA 300 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 TCTGAGCGGCGGGTGGTCTTTGAGGTCGGACAGCCATATTTGGAGGTCCATTGGGATTGA 360 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 AATGTGGTTGTTGTCCTGACATAGTAGGTGGCTGTGTCTGACCTGACGGATAGTCATAAG 420 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GCGGCTGGGATTGTGGAGCAACAGAATTAGGAGGAAACCCATTAGGTGGCATATTATTTG 480 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GATAAAACTTCTGTTGCATTCCTTGAGGTGCTTGACTTCTTTGTGGAACTTGTTCAACAC 540 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 TGAAATGGTTTGGATGTGGAACGGGTCCAGGTCCACCGTGATGTGGAAAGCCGGAGGGGG 600 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GCAAGTGAGACCCAGGTGAAGATATAGGCATCATATGATTACCTGGAGCATTAGGACCCA 660 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 CATGTGTTGTCTGATTGATATGACCAGGGAAAGCCATAACCGGTGCTCGCATAGACGTGT 720 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 ------------------------------------------------------------ consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 CTTCATCCGGCATAGCAGGGGGGATTTGGTCATGACTGCGATTTAGCATAGCGATAGCCA 780 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 -----------------------------------------------------NCAGAAT 7 consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 CTTTGGGATCGACAATCTTCATAACGATTTGAGCCTGCAGTAAAGCATATGCTAGTTGAG 840 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 TAGAGGGAACCCCATTAGTNGGCATATANNTTGATNAAANCTCTGTGCATTTTCCTGNAG 67 consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GATTTTGGAGTAACATATTACGTGCTTCATTAGGATTGTTTTGTATACAAAGTTTCATCT 900 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 GTGCTGACTTTCNTTGTGGANCTGTCNNANCACTGAAATGNNTTGATGTNGGAACGGGTC 127 consensus_11202#2 ------------------------------------------------------------ consensus_11202#0 GCTTCATTAGTTCATACATTTGTTCAGGTGGTAAGCTAGCAACTGCTCGACTAATAGCTT 960 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 CAGGTNCCACCGTGATGTGAAAAGCCGAGGGGGGCAAAGTGAGACCCAGGTGAAGATATA 187 consensus_11202#2 -----------------------------------CTAGTGAGACCCAGGTGAAGATATA 25 consensus_11202#0 CTGGTGCAGCTTGTGGATCAATATTATCTCCATATGGGCTTTCAAGTGGCGGGCCTACAG 1020 consensus_11202#3 ----------------------------------------------TGGCGGGCCTACAG 14 consensus_11202#1 GGCATCATATGATTACCTGGAGCATTAGGACCCACAT-GTGTTGTCTG------ATTGAT 240 consensus_11202#2 GGCATCATATGATTACCTGGAGCATTAGCGACCTCACAGTGTCGTATGTCTTGTATTGAT 85 ** * * consensus_11202#0 ATGGGTTACTT----AAAGCCAGTTCAGCAGA--ATTTTGTTCCCCA-GCAGCTGGTCCG 1073 consensus_11202#3 ATGGGTTACTT----AAAGCCAGTTCAGCAGA--ATTTTGTTCCCCA-GCAGCTGGTCCG 67 consensus_11202#1 AT-GACCAGGG----AAAGCCA--TAACCGG--TGCTC-GCATA-GACGT----GTCTTC 285 consensus_11202#2 ATCGACNCAGGCGACAATGCCAA-TAACCTGGTCGCTCAGCATATGACGTAGTCGTTCAC 144 ** * ** **** * * * * * * * * * consensus_11202#0 ATACGCAGAGG-ACGGCCATTGAATTCAATATTTTGAAGATTCCGCAAAGCACTCGCAGC 1132 consensus_11202#3 ATACGCAGAGG-ACGGCCATTGAATTCAATATCTTGAAGATTCCGCAAAGCACTCGCAGC 126 consensus_11202#1 ATCCGGC-ATA-GCAGGGGG--GATTT--GGTCAT--GACTGCGATTTAGCAT----AGC 333 consensus_11202#2 TCTCGGCTATACGCAGGCGGTGGATCTATGGTCATTGAACTGCTATTCTGCNATG--AAC 202 ** * * * ** * * * * ** * * consensus_11202#0 AATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCTTTGGGTTTCCCAGATTCTCTATC 1192 consensus_11202#3 AATAGCTGGGTTGTTGTATTCACAAAATCCATAGCCATTGGGTTTTCCAGACTGTCTATC 186 consensus_11202#1 GATAGCCACTTTG--GGATCGACAATCTTCATAACGATTTGAGCCTGCAG----TAAAGC 387 consensus_11202#2 GATAGCCACTTTG--GGATCGACAATCTTCATAACGATTTGAGCCTGCAG----TATAGC 256 ***** *** * ** **** * **** * ** * *** * * * consensus_11202#0 ATATACCAAACGGAAACC---GATTACAGGACCAG---CCTTGCTAA-ATAGTTCGATAA 1245 consensus_11202#3 ATATATCAAACGGAAACC---GATTACAGGACCAT---CCTTGCTAA-ATAGCTCGATAA 239 consensus_11202#1 ATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTAT 447 consensus_11202#2 ATATGCTAGTTGAGGATTTTGGAGTAACATATTACGTGCTTCATTGGGATTGTTTTGTAT 316 **** * * * ** ** * * * * * ** * * ** consensus_11202#0 GCTTTTCCTCAGTCGCTTCAT-ACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTT 1304 consensus_11202#3 GCCAGTCCTCTGTCGCCTTATGACGATATATCGCCCACCGTGATAGATCGTGCGGT---- 295 consensus_11202#1 ACAAAGTTTCATCTGCTTCAT-ACGGTATGTTGCCTACGAAGATAGATCGCGCGGTCTTT 506 consensus_11202#2 ACAAAGTTTCATCTGCTTCAT-TAGTTCATACATTTGTTCAGGTGGTAAGCTAG------ 369 * ** ** * ** * * * * * * * consensus_11202#0 TCAGCAGCCTCCTTAGTTAACACGGGAA-------------------------------- 1332 consensus_11202#3 ------------------------------------------------------------ consensus_11202#1 TCAGCAGCCTCCTTAGTTAACACGGGTGCCGCCATCAAAGCTAACCTTCTGGAAAGATTT 566 consensus_11202#2 -CAACTGCTCGACTAATAGCTTCTGGTGCAGCT-TGTGGATCAATATTA----------- 416 consensus_11202#0 ------------------------------------------------------ consensus_11202#3 ------------------------------------------------------ consensus_11202#1 TAACTGATATGGACTACGATTTATTAATAAGAAAATGTGTCAAGTGGACTGAAG 620 consensus_11202#2 ------------------------------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||