These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11225#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 895 fasta sequence [TCCGAGGCCATAATTCGGCACGAGGGTTTTTACACATTCAGATACTTACCTGTGGACATACGTGATCCAATGCTGCAGATTAAGGAGACTCTTTGATCAAATTCTGCTTCAATTCTGTTCCCAACCATTTGAAACACTTGTACACCAGCCTAGAGATGTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG-AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT-TCGGTGGACAGGAACCCTGGGCAG-AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG-GTCTGACGCTG-ATG-ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG-TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA-GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG-ATATTG-AAGGAGATATCAT-GGAGCTTTTGGAGAAGAAGTGATCAATGG-AACTTATGAGCTTTG-AACAAATTCTCGCTATATGACGAT-GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGT-GTTAT] [+] EMBL CD082564 [TCCGAGGCCATAATTCGGCACGAGGGTTTTTACACATTCAGATACTTACCTGTGGACATACGTGATCCAATGCTGCAGATTAAGGAGACTCTTTGATCAAATTCTGCTTCAATTCTGTTCCCAACCATTTGAAACACTTGTACACCAGCCTAGAGATGTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGg ] [-] EMBL CD076162 [ tTTTTCACACATTCAGATACTTACCTGTGGACATACGTGATCCAATGCTGCAGATTAAGGAGACTCTTTGATCAAATTCTGCTTCAATTCTGTTCCCAACCATTTGAAACACTTGTACACCAGCCTAGAGATGTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGgcg ] [+] EMBL CD059677 [ AAACACTTGTACACCAGCCTAGAGATGTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGGAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAAAAAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAAAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTACCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAAAAGTTCGTGACTGAAAAGTACGGCGTCCAATTCGATATGTTTTCAAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAA ] [-] EMBL CD092947 [ cCACCAGCCTAGAGGTGTTTTGCCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGtgga ] [-] EMBL CD162868 [ AGAGATGTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCGCGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTG ] [-] EMBL CD181009 [ GTTTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTG ] [-] EMBL CD180913 [ TTTTGCCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGG ] [-] EMBL CD180926 [ TTTTGCCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGGTTGTCTAAATGTTAAAGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTAAATTAGCATTCCCCTGCAATCAAT TCGGTGG ] [+] EMBL CD079329 [ TTTGTCGCTCCTTATTCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATGATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTNTG AACANATTCTCGCTATATGACGAT GGNCATCTCANATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGGATTNTGNTTACCTTGCTCATTTTTTTCATTGAAACCATTNCTCAGAATAAATGTNGTT ] [+] EMBL CD097633 [ TCAAATCTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTATGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTG ] [-] EMBL CD195509 [ ATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTGGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAGCCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAAT ] [+] EMBL CD155448 [ TTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTGGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACA ] [-] EMBL CD179439 [ TTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACG ] [+] EMBL CD155447 [ cactTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTTTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATCAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATGAT ] [+] EMBL CD151858 [ TGTAACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATACTAGCATTCCCCTGCAATCAAT TCGGTG ] [+] EMBL AW016948 [ AACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGCCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCCGTGGACAGGAACCCTGGGCAG AAGCGGCGATTAAGAAGTTCGTGACTGAGAAGTACAGCGTCCAATTCGATATGTATTCGAAGATAAAAGTCAATGGCGTCTGACGCTG ATG ATCTGTATGAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG CGGAACTTCTCAAAGTTTCTTG ] [+] EMBL SMGLUPER [ AACGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAACTTTG AACAAATTCTCGCTATATGACGAT GGCAGTCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGT G ] [+] EMBL BF936124 [ CGCGATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTCAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTCGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTCGATCGTCAA AGACAACCGGCTAAAAGATATTCTCCTACAACTGCCC ] [+] EMBL CD083415 [ ggCGCGATGTCTTCATCTCACAAGTC TGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTAT ] [+] EMBL CD080670 [ GCGATGTCTT ATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTTTG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATG ] [+] EMBL AI067498 [ ATGTCTTCATCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAGAATTTCTTGTANATCGTCAA GGACA ] [+] EMBL AI068151 [ AAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGCGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAACAGTAGACAACATGGTACCTTAAC ] [+] EMBL AI111023 [ AGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAANATAAAAGTCAATGG GTCTGACNCTG ATG ATCTTTATAAATTCCTCAAAAGTANACAACATGGTACCTTAACAAATAATATTAAGTTGGAACT ] [-] EMBL CD074591 [ TGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTTTG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCAGTTTTTTCATTGAAACCAATTCTCAGAATAAATGT ] [+] EMBL CD129732 [ GGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTATAGAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGCATATTAt ] [+] EMBL AA917170 [ TATACGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTAATTG AA GTCGCTTGCAAGTGAGGCGCAACGGACAAG ACTATCG CAACTCCAGG AGATGCACACTCGACTGtagc ] [-] EMBL CD073606 [ GAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATGATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTTTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTTTG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGGATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGT GTTAT] [+] EMBL CD062261 [ TCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGGAAGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAAAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCAAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCT ] [+] EMBL CD199817 [ TCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAAT ] [-] EMBL CD077265 [ CGCTTGCAAGTGAGGCGCAACGGACAAGAACTATCGCCAACTCCAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTTTG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTC TTTTTTTCATTGAAACCACTTCTCAGAATAAATGT ] [-] EMBL CD119392 [ CAGG AGATGCACACTCGACTGGTTGGCAAAGGCCTCCGTATATTAGCATTCCCCTGCAATCAATAAAGGTGGACAGGAACCCTGGGCAG AAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGAAATCCAATTCGATATGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATT ] [+] EMBL AA559608 [ TCCCCTGCAATCAAT TCGGTGGACAGGAACCCTGGGCAGNAAGCGGAGATTAAGAAGTTCGTGACTGAGAAGTACGGCGTCCAATTCGATNTGTTTTCGAAGATAAAAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTANATCGTCAAGGGACAACCGGTTAAAANATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCNT GGAGC ] [+] EMBL AA559748 [ CGTCCAATTCGATATGTTTTCGAANTTAAAAGTCAATGG GTCTGNCGCTGAATGAATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTANATCGTCAAGGGACAACCGGTTAAAAGNTATTCTCCTACAACTGCCCCATATGAATATTGAAAGGAGATATCATGGGAGCTTTTGGAGAANAAGTGATCAATGGAAACTTATGAGCTTTGAAACAAATTCTCGCTATATGACGATGGGCAA ] [+] EMBL SM571 [ AAGTCAATGG GTCTGACGCTG ATG ATCTTTATAAATTCCTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTNGGAGAAGAAGTGATCAA ] [-] EMBL SMAA43892 [ TAATATTAAG TGGAACTTCTCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATGTTG AAGGAGATATCAT GGAGCTTTTGGAGAAGAAGTGATCAATGG AACTTATGAGCTTTG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGT ] [+] EMBL SM547 [ acgagCAAAATTTCTTGTAGATCGTCAA GGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATG ATATTG AAGGAGATATCAT GGAGCTTTGGGAGAAGAAGTGATCAATGG AACTTATGAGCTTNG AACAAATTCTCGCTATATGACGAT GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTGGTGTGCACCTGATTGCAGAATTTGGTTTACCTGGCTCATTTTTTTCATTGAAACCACTNCTCAGAATAAATG ] [+] EMBL SM546 [ GGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGT ] consensusID : consensus_11225#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence [GATAAGTAATGACATATGTTTTAAGATTTCTGACCGAACTTTTAATTTTTTGTAGGATATTGAAGGAGATATCATGGAGCTTTTGGAGAAGAAGTGATCAATGGAACTTATGATCTTTGAACAAATTCTCGCTATATGACGATGGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAACCAGTTTTGTGTGCACCTGATTGCAGGATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGTGTTATCTATAATTGAATGACTTGTACTTCACTGGACTTGCTTAAGAGTTGACTGAAATGCTTGTCATCGTAATTACCAACCAATTTAATTTCAGAAGTGAACAATAGTAGTTGGACTATTAGAAAAGGTGGTTCATGTCTACCAACCAATTTAATTTGAGAAGTAAACACTAGTGGTTGGACTATTAGAGAAAGTGGTTCATGTTTGCGTCGTAATTATTAATAAAAATTATCGGTTCTGTGGTCTGACAATTTAGTCTAGTCAGTGAACTAATAATAGGGAGTGAAGTACTTGGGCGTGTTGACTGCTTCACTTATCGTGGG] [+] EMBL CD115433 [GATAAGTAATGACATATGTTTTAAGATTTCTGACCGAACTTTTAATTTTTTGTAGGATATTGAAGGAGATATCATGGAGCTTTTGGAGAAGAAGTGATCAATGGAACTTATGATCTTTGAACAAATTCTCGCTATATGACGATGGCAATCTCAAATGTTCATTGGTTGCCATTTGATGAAACCAGTTTTGTGTGCACCTGATTGCAGGATTTTGTTTACCTTGCTCATTTTTTTCATTGAAACCACTTCTCAGAATAAATGTGTTATCTATAATTGAATGACTTGTACTTCACTGGACTTGCTTAAGAGTTGACTGAAATGCTTGTCATCGTAATTACCAACCAATTTAATTTCAGAAGTGAACAATAGTAGTTGGACTATTAGAAAAGGTGGTTCATGTCTACCAACCAATTTAATTTGAGAAGTAAACACTAGTGGTTGGACTATTAGAGAAAGTGGTTCATGTTTGCGTCGTAATTATTAATAAAAATTATCGGTTCTGTGGTCTGACAATTTAGTCTAGTCAGTGAACTAATAATAGGGAGTGAAGTACTTGGGCGTGTTGACTGCTTCACTTATCGTGGG] consensusID : consensus_11225#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 356 fasta sequence [TCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTNNTTGTNAATGTCGCTTGCAAGTGAGGCGCNACGGACAANAACTATCGCCAACTCCAGGAGATGCNCACTCGACNGGTTGGCAAAGGGCCTCCGTATATTAGCATTCCCCTGCAATCAATTCGGTGGACANGAACCCNGGGCANAAAGCGGAAAATTANCAAGTTTCGTGACTGAAAATTNCGGCGTCCAATTNCAATNTGTTTTCCNAAANANAAAAATTCAATGGGTCTGANCCCTNATNANCCTTTATAAATTCCNCC] [+] EMBL AW466254 [TCTCACAAGTCTTGGAATTCAATATATGAATTCACTGTTAAGGATATCAATGGTGTGGATGTCTCCTTAGAGAAATACCGTGGTCACGTTTGTCTNNTTGTNAATGTCGCTTGCAAGTGAGGCGCNACGGACAANAACTATCGCCAACTCCAGGAGATGCNCACTCGACNGGTTGGCAAAGGGCCTCCGTATATTAGCATTCCCCTGCAATCAATTCGGTGGACANGAACCCNGGGCANAAAGCGGAAAATTANCAAGTTTCGTGACTGAAAATTNCGGCGTCCAATTNCAATNTGTTTTCCNAAANANAAAAATTCAATGGGTCTGANCCCTNATNANCCTTTATAAATTCCNCC] consensusID : consensus_11225#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 276 fasta sequence [CCGAATTCGGCACGAGCGGCACGAGTACAACTGCCCCATATGATATTGAAGGAGATATCATGGAGCTTTTGGAGAAGAAGTGATCAATGGAACTTTATGAGCTTTTGAAACAAAAATTACTCGCTTAATAATGNACGGATGGCAAATCNTCAAAATGTTCAATTGGTTGCCAATTTGATGAAATCAAGTTTTGTGTGCCACCTGAATTGCAAGATTTTTGTTTCACCTTGCTCTATTTTTTTCTTTTGGAAACCTACTTTCTCAGGAATAAATGGT] [-] EMBL AA999552 [CCGAATTCGGCACGAGCGGCACGAGTACAACTGCCCCATATGATATTGAAGGAGATATCATGGAGCTTTTGGAGAAGAAGTGATCAATGGAACTTTATGAGCTTTTGAAACAAAAATTACTCGCTTAATAATGNACGGATGGCAAATCNTCAAAATGTTCAATTGGTTGCCAATTTGATGAAATCAAGTTTTGTGTGCCACCTGAATTGCAAGATTTTTGTTTCACCTTGCTCTATTTTTTTCTTTTGGAAACCTACTTTCTCAGGAATAAATGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11225#1 ------------------------------------------------------------ consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 TCCGAGGCCATAATTCGGCACGAGGGTTTTTACACATTCAGATACTTACCTGTGGACATA 60 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 ------------------------------------------------------------ consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 CGTGATCCAATGCTGCAGATTAAGGAGACTCTTTGATCAAATTCTGCTTCAATTCTGTTC 120 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 ------------------------------------------------------------ consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 CCAACCATTTGAAACACTTGTACACCAGCCTAGAGATGTTTTGTCGCTCCTTATTCAAAT 180 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 -----------------------------------GATAAGTAATGACATATGTTTTAAG 25 consensus_11225#3 -------------------------------------------------CCGAATTCGGC 11 consensus_11225#0 CTCTCGAAACATTGTTCACGATTAGATGTAACGCGATGTCTTCATCTCACAAGTCTTGGA 240 consensus_11225#2 --------------------------------------------TCTCACAAGTCTTGGA 16 * consensus_11225#1 ATTTCTGACCGAACTTTTAATTTTTTGTAGGATATTGAAGGAGATATCATGGAGCTTTTG 85 consensus_11225#3 ACGAGCGGCACGAGTACAACTGCCCCATATGATATTGAAGGAGATATCATGGAGCTTTTG 71 consensus_11225#0 ATTCAATATATGAATTC-ACTGTTAAGGATATCAATGGTGTGGATGTCTC----CTTAGA 295 consensus_11225#2 ATTCAATATATGAATTC-ACTGTTAAGGATATCAATGGTGTGGATGTCTC----CTTAGA 71 * * * * * * * ** * *** ** *** consensus_11225#1 GAGAAGAAGTGATCAA---TGGAACTT-ATGATCTTT--GAACAAA---TTCTCGCTATA 136 consensus_11225#3 GAGAAGAAGTGATCAA---TGGAACTTTATGAGCTTTTGAAACAAAAATTACTCGCTTAA 128 consensus_11225#0 GAAATACCGTGGTCACGTTTGTCTAATTGTTAATGTCGCTTGCAAGTGAGGCGCAACGGA 355 consensus_11225#2 GAAATACCGTGGTCACGTTTGTCTNNTTGTNAATGTCGCTTGCAAGTGAGGCGCNACGGA 131 ** * *** *** ** * * * * *** * * * consensus_11225#1 TGACG-----ATGGCAATCTC---AAATGTTCA-TTGGTTGCCA-TTTGATGAAACCA-G 185 consensus_11225#3 TAATGNACGGATGGCAAATCNTCAAAATGTTCAATTGGTTGCCAATTTGATGAAATCAAG 188 consensus_11225#0 CAAGAA-CTATCGCCAACTCCAGGAGATGCACACTCGACTGG----TTGGCAAAGG-C-- 407 consensus_11225#2 CAANAA-CTATCGCCAACTCCAGGAGATGCNCACTCGACNGG----TTGGCAAAGGGC-- 184 * * *** * *** ** * * * *** ** consensus_11225#1 TTTTGTGTGC-ACCTGA-TTGCAGGATTTTG--TTTACCTTGCTC-ATTTTTTTCATT-- 238 consensus_11225#3 TTTTGTGTGCCACCTGAATTGCAAGATTTTTGTTTCACCTTGCTCTATTTTTTTCTTTTG 248 consensus_11225#0 CTCCGTATAT--------TAGCATTCCCCTGCAATCAATTCGGTGGACAGGAACCCTG-- 457 consensus_11225#2 CTCCGTATAT--------TAGCATTCCCCTGCAATCAATTCGGTGGACANGAACCCNG-- 234 * ** * * *** * * * * * * * * consensus_11225#1 GAAACCA--CTTCTCAG-AATAAATG-TGTTATCTATAATTGAATGACTTGTACTTCACT 294 consensus_11225#3 GAAACCTACTTTCTCAGGAATAAATG--GT------------------------------ 276 consensus_11225#0 GGCAGAA-GCGGAGA-TTAAGAAGTT-CGTGACTGAGAAGTACGGCGTCCAATTC-GATA 513 consensus_11225#2 GGCANAAAGCGGAAAATTANCAAGTTTCGTGACTGAAAATTNCGGCGTCCAATTNCAATN 294 * * * ** * ** consensus_11225#1 GGACTTGCTTAAGAGTTGACTGAAATGCTTGTCATCGTAATTACCAACCAATTTAATTTC 354 consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 TGTTTTCGAAGATAAAAG---TCAATGGGTCTGACGC---TGATGATC-TTTATAAATTC 566 consensus_11225#2 TGTTTTCCNAAANANAAAAATTCAATGGGTCTGANCCC--TNATNANCCTTTATAAATTC 352 consensus_11225#1 AGAAGTGAACAATAGTAGTTGGACTATTAGAAAAGGTGGTTCATGTCTACCAACCAATTT 414 consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 CTCAAAAGTAGACAACATGGTACCTTAACAAATAATATTAAGTGGAACTTCTCAAAATTT 626 consensus_11225#2 CNCC-------------------------------------------------------- 356 consensus_11225#1 AATTTGAGAAGTAAACACTAGTGGTTGGACTATTAGAGAAAGTGGTTCATGTTTGCGTCG 474 consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 CTTGTAGATCGTCAAGGACAACCGGTTAAAAGATATTCTCCTACAACTGCCCCATATGAT 686 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 TAATTATTAATAAAAATTATCGGTTCTGTGGTCTGACAATTTAGTCTAGTCAGTGAACTA 534 consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 ATTGAAGGAGATATCATGGAGCTTTTGGAGAAGAAGTGATCAATGGAACTTATGAGCTTT 746 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 ATAATAGGGAGTGAAGTACTTGGGCGTGTTGACTGCTTCACTTATCGTGGG--------- 585 consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 GAACAAATTCTCGCTATATGACGATGGCAATCTCAAATGTTCATTGGTTGCCATTTGATG 806 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 ------------------------------------------------------------ consensus_11225#3 ------------------------------------------------------------ consensus_11225#0 AAATCAGTTTTGTGTGCACCTGATTGCAGAATTTTGTTTACCTTGCTCATTTTTTTCATT 866 consensus_11225#2 ------------------------------------------------------------ consensus_11225#1 ----------------------------- consensus_11225#3 ----------------------------- consensus_11225#0 GAAACCACTTCTCAGAATAAATGTGTTAT 895 consensus_11225#2 ----------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||