These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11268#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 45 consensus length = 1065 fasta sequence [TGTTAAACGCAAATACATTTTGTATTCTTACTGAATTGGCTTAGTTTTCCTCTCGTTCTCTCCTAGATTTTCACACTCGCTTATCACATAACATACTTCCAGGCTAGACGCAAAACAGCCACAGTCTGGACGTTATAAAGTCATAAAAAGTTGATTATATTAAAATAAGTCAATGACTGGTTCAGTTACCTATGTAATTGAATAGCCTCATTTGCTTCAGTATAAGCTTCGTTACATTTATAATGAAACTGTTACATGGCAATGCAAATATTCCGGACATTAAGTCCATATTTGGTTCAGATTTTTCTGGATGTATTAACATGAATGTAACGCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAGCAACATCTCAATCAAATTTAGATCATCCACCTAGTCGTCGTCGCTTATCTCGTACTATTCGG-AAAAAACGTAATACTGTTCGTGATTCCAATAAAAACGAGGCCAAGTTTGTTCATAATGGTTCTTCAGAGATGGGTGATTTCCATAGTGTCCCTTTTCAAACGCCCCGTCTGTCTGATGCTATTTCAAACGTAAATAATGTATTAAAGCACAAGAAATTGAATAGGAAACGTAAAAAGTCAAATTCGTAAAGAAATATTTTGTGTATTTTTATTTACCTAGTTCCCATTGTGATGTCCATTACCTTTTTTGTATTTATTTTCACAATGAAATAAAGAGTATAAAATTGAAATACACTCT] [-] EMBL CD134240 [TGTTAAACGCAAATACATTTTGTATTCTTACTGAATTGGCTTAGTTTTCCTCTCGTTCTCTCCTAGATTTTCACACTCGCTTATCACATAACATACTTCCAGGCTAGACGCAAAACAGCCACAGTCTGGACGTTATAAAGTCATAAAAAGTTGATTATATTAAAATAAGTCAATGACTGGTTCAGTTACCTATGTAATTGAATAGCCTCATTTGCTTCAGTATAAGCTTCGTTACATTTATAATGAAACTGTTACATGGCAATACAAATATTCCGGACATTAAGTCCATATTTGGTTCAGATTTTTCTGGATGTATTAACATGAATGTAACGCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAGAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGAGATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAGCAACATCTCAATCAAATTTAGATCATCCACCTAGTaaca ] [+] EMBL CD122642 [ aacgatATTTTCACACTCGCTTATCACATAACATACTTCCAGGCTAGACGCAAAACAGCCACAGTCTGGACGTTATAAAGTCATAAAAAGTTGATTATATTAAAATAAGTCAATGACTGGTTCAGTTACCTATGTAATTGAATAGCCTCATTTGCTTCAGTATAAGCTTCGTTACATTTATAATGAAACTGTTACATGGCAATGCAAATATTCCGGACATTAAGTCCATATTTGGTTCAGATTTTTCTGGATGTATTAACATGAATGTAACGCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACT ] [+] EMBL CD081903 [ ttACACTCGCTTATCACATAACATACTTCCAGGCTAGACGCAAAACAGCCACAGTCTGGACGTTATAAAGTCATAAAAAGTTGATTATATTAAAATAAGTCAATGACTGGTTCAGTTACCTATGTAATTGAATAGCCTCATTTGCTTCAGTATAAGCTTCGTTACATTTATAATGAAACTGTTACATGGCAATGCAAATATTCCGGACATTAAGTCCATATTTGGTTCAGATTTTTCTGGATGTATTAACATGAATGTAACGCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAACCACATCTCAATCAAATTTAGATCATCCACCTAGTCGTC ] [+] EMBL CD120542 [ cgCGCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTAAATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD162386 [ GCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGg ] [+] EMBL CD090714 [ GCCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD120541 [ cgCTGGCAGCAAATCAGCAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTAAATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158326 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158328 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD120593 [ CAAACCTAGTACCATACGCCGTTAAAAAGTT CAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170092 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAA ] [+] EMBL CD137500 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCC ] [+] EMBL CD158330 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158335 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGGCAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158357 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158365 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158382 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158395 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158399 [ CAAACCTAGTACCATACGCCGTTAAAAAGTCCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158402 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158414 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158430 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158425 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158432 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGCGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158438 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158441 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158442 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158443 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158455 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170067 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170103 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170127 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170138 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170154 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170165 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAGAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD170172 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158334 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACGCAGACGTCAC ] [+] EMBL CD090699 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD120591 [ CAAACCTATTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158322 [ CAAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158323 [ ccAACCTAGTACCATACGCCGTTAAAAAGTTCCAAAGTGGAGAGACAGATACGATTATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [+] EMBL CD158418 [ AGATACGA TATATGGTGGAGCAAACATGGTGCTGTTGCGAAGACTGTTGCGTGTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCAC ] [-] EMBL CD122220 [ GTGCTGAGATGTTCAAAAGCATTGTGCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAGCAACATCTCAATCAAATTTAGATCATCCACCTAGTCGTCGTCGCTTATCTCGTACTATTCGGAAAAAAACGTAATACTGTTCGTGATTCCAATAAAAACGAGGCCAAGTTTGTTCATAATGGTTCTTCAGAGATGGGTGATTTCC ] [+] EMBL CD064916 [ GCTCAATACACAGACGTCACAGTTAGATGGTGCCAGCCCAACAAAAATGTACCAGTGTAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAGCAACATCTCAATCAAATTTAGATCATCCACCTAGTCGTCGTCGCTTATCTCGTACTATTCGG AAAAAACGTAATACTGTTCGTGATTCCAATAAAAACGAGGCCAAGTTTGTTCATAATGGTTCTTCAGAGATGGGTGATTTCCATAGTGTCCCTTTTCAAACGCCCCGTCTGTCTGATGCTATTTCAAACGTAAATAATGTATTAAA ] [+] EMBL CD078447 [ TAGTCGCTTGCATCTTCAGTCGTGTAATTGCTCAGTTCCTGATACAACAATATCTTGCACCCTGGAAGAACCAGGAATAGCTATCCTATTTTCTAAATCTCAGTTCCCAGGAGAAGATTGTCAACTGCCTGTTGATTTTGGGGGTAACAGTTTTTCAGACTTTACGAACATAGGAACAACATCTCAATCAAATTTAGATCATCCACCTAGTCGTCGTCGCTTATCTCGTACTATTCGG AAAAAACGTAATACTGTTCGTGATTCCAATAAAAACGAGGCCAAGTTTGTTCATAATGGTTCTTCAGAGATGGGTGATTTCCATAGTGTCCCTTTTCAAACGCCCCGTCTGTCTGATGCTATTTCAAACGTAAATAATGTATTAAAGCACAAGAAATTGAATAGGAAACGTAAAAAGTCAAATTCGTAAAGAAATATTTTGTGTATTTTTATTTACCTAGTTCCCATTGTGATGTCCATTACCTTTTTTGTATTTATTTTCACAATGAAATAAAGAGTATAAAATTGAAATACACTCT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||