These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 744 fasta sequence [GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT] [+] EMBL CD111076 [GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATACGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ] [+] EMBL CD098449 [GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ] [+] EMBL CD111563 [nGCACTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGACGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATNATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGG ] [-] EMBL CD111249 [ GCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGATTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGT ] [-] EMBL CD111234 [ GCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGT ] [+] EMBL CD079116 [ TGACGTTTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTNCTCCTCCACCTCCACCGNCTCCTGGATATCGTTGAGATGCCATCTGATTCATGGTATCTATCCTAGAT ACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGNNTCAATATAC ] [+] EMBL AW017454 [ TTGGTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCATCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGCGCGACTGCGACGAGTTTCGCCAGGTCAAAAACATGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGGTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTACATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTCAAGCCATTGACTGGGATTGCTGGCCGACGCGGGATGCCCCTTGCAACCCCAGCAGCAACAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTAGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTACTGGCATGCCACCTGCACCTTCTACCACGA ] [-] EMBL CD170757 [ GTTTCAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTG ] [+] EMBL CD180626 [ CAACTATGCCTGTTAATAACAATGCACAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTGTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCC ] [-] EMBL CD073844 [ TAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTAACTTGTTTCAATATACT] [-] EMBL CD073568 [ GAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCNTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTTTGATGCAACCACGAGCACTTTNTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT] [-] EMBL CD076899 [ ccaACTTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCTTCTTGGATATCGTTGAGATGCAATGTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAAAGCATTTACTTGTTTCAATATACT] consensusID : consensus_11286#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 721 fasta sequence [AGGCCAANAATTTGGCACGAGGTTCGGTTTAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT-CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGTTTCATATAC] [+] EMBL CD079582 [AGGCCAANAATTTGGCACGAGGTTCGGTTTAACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAAAGCATTTACTTGTTTCATATAC] [-] EMBL CD180602 [ AACTATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGAGGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGT ] [+] EMBL CD159321 [ ATGCCTGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAGACAAGGCAGCAAAGCAGGA ] [+] EMBL CD126626 [ CCAGCATGT ATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGGCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGC ] [-] EMBL CD126657 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACT GA TTAAGC TGAAT GTA TGCTGT ] [-] EMBL CD126639 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGC GTATGCCCCGT CAACTCCAca ] [-] EMBL CD126631 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATATAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGCGta ] [-] EMBL CD126628 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGG ] [-] EMBL CD166386 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTCCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTTTTTTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCCCCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCG ] [-] EMBL CD126659 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCACCCTACAGCAGGCGCTTGGTCAACTGGAGCTAAGCCATTGACTGGTATTGCTGTCGGACGCG ] [-] EMBL CD126600 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC GACGCG ] [-] EMBL CD063906 [ GCATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCGGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACT GTA TGCTGTCGGACGCGG ] [+] EMBL CD178056 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTCCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCCGCT CCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTC ] [+] EMBL CD178050 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATG AT TAAT TGGCGCGGCGGCNACGAG TTCCCCGGGTC AAAACAGGGCACCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ] [+] EMBL CD126645 [ CATG TAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTG ] [+] EMBL CD178006 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ] [+] EMBL CD178026 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ] [+] EMBL CD178003 [ CATGTTAATTATAGGATAAGATGTACCATGCAAGACGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACG ] [-] EMBL CD177984 [ ATGTTAATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGC ] [+] EMBL CD144588 [ AATTATAGGATAAGATGTACCATGCAAGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGGATGCCACCTCCACCTCCTCCCCCGACA GTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGTTATCCT ] [+] EMBL AW017284 [ AACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTTCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGACTCCTGGATATCGNTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACCACTT ] [+] EMBL AI976852 [ AACATTCAAAGCTTTCGATCGTCATATGAATATAATATTGTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTGCTGGCATGCCACCTCCACCTCCTCCCACGAGAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCAC ] [-] EMBL CD182514 [ TCAAAAACAAGGCAGCAAAGCAGGATAAGGATCGGCAAGAAAAACGGGCTTTGGGCCTTGTCCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGC ] [+] EMBL CD178031 [ GATCGGCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCT ] [+] EMBL CD129261 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTCGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTAC ] [+] EMBL CD167974 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTCGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTGATTCACATCTTGCGACTGCT ] [+] EMBL CD129270 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCATCAGCACCGGGTCTGATGCAAC ] [+] EMBL CD129373 [ GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGT ] [-] EMBL CD129509 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACC ] [-] EMBL CD129589 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTA ] [-] EMBL CD129426 [ CAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACG ] [-] EMBL CD191126 [ TGCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCACCca ] [-] EMBL CD185874 [ GCTGCCCGAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCNTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGCAATCTGATTCATGGTATCTATCCTAGATAACC ] [+] EMBL CD144638 [ GAGTT CCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCCACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTACCGCTGTCCGAGGGTAACCTCCTCCTCCACCTCCACC ] consensusID : consensus_11286#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 308 fasta sequence [CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTACCGAGGTCG] [-] EMBL CD168194 [CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAATGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGCTTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGCAACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGGAGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTACCGAGGTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11286#0 GGCGCTTGTTTAGTTCAATATAAACGTGACGGCGGCCTGACGTTTGGTTTCAACTATGCC 60 consensus_11286#1 --------------------AGGCCAANAATTTGGCACGAGGTTCGGTTT-AACTATGCC 39 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 TGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCA 120 consensus_11286#1 TGTTAGTAAGAATGCAAAGATCAGCCAGCATGTTAATTATAGGATAAGATGTACCATGCA 99 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 AGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATT 180 consensus_11286#1 AGATGGCCGGCAACTAGTAGGAACATTCAAAGCTTTCGATCGTCATATGAATATAATATT 159 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 GTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCG 240 consensus_11286#1 GTGCGACTGCGACGAGTTTCGCCAGGTCAAAAACAAGGCAGCAAAGCAGGATAAGGATCG 219 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 300 consensus_11286#1 GCAAGAAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 279 consensus_11286#2 -CAAGGAAAACGGGCTTTGGGCCTTGTTCTTCTGCGAGGCGAACACGTTGTTACTATGAA 59 **** ****************************************************** consensus_11286#0 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 360 consensus_11286#1 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 339 consensus_11286#2 TGTAGATGGTCCCCCACCGCCTGAAGATGCTGCCCGAGTTCCGCTCCCTACAGCAGGCGC 119 ************************************************************ consensus_11286#0 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 420 consensus_11286#1 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 399 consensus_11286#2 TTGGTCAACTGGAGTTAAGCCATTGACTGGTATTGCTGTCGGACGCGGTATGCCCCTTGC 179 ************************************************************ consensus_11286#0 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 480 consensus_11286#1 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 459 consensus_11286#2 AACCCCAGCAGCAGCAATTGCCCCAGCTCCACCTGCTGGTTTAGGTGGTCCAGTTTGGGG 239 ************************************************************ consensus_11286#0 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCC 540 consensus_11286#1 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCACCTCC 519 consensus_11286#2 AGTTGGAGCACCAGCACCGGGTCTGATGCAACCACGAGCACTTCCTGGCATGCCAGGGTA 299 ******************************************************* consensus_11286#0 ACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTAC 600 consensus_11286#1 ACCTCCTCCCCCGACAGGTGCACCAACTGCGGCGTTCGGTCGTGGGATGCCACCTGTTAC 579 consensus_11286#2 CCGAGGTCG--------------------------------------------------- 308 * ** consensus_11286#0 CGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGC 660 consensus_11286#1 CGCTGTACGAGGGTATCCTCCTCCTCCACCTCCACCGCCTCCTGGATATCGTTGAGATGC 639 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 AATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTTTGTAAA 720 consensus_11286#1 AATCTGATTCATGGTATCTATCCTAGATAACCACTTATCATCTCTGAGAAGTTNTGTAAA 699 consensus_11286#2 ------------------------------------------------------------ consensus_11286#0 AGCATTTACTTGTTTCAATATACT 744 consensus_11286#1 AGCATTTACTTGTTTCA-TATAC- 721 consensus_11286#2 ------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||