These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11323#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 41 consensus length = 655 fasta sequence [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA-GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA-GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT-GTCAA-TTGAATATCCTAAAGATACATC-GGATGCTATCACTAAAGTTCAGAG-CCAAGGAAGAATCATGA-TAGCG-AACGCCAAACGTCATGCAGATG-C-TT-GTTTAAAG-ATGAAAGGTAGTGCAG-AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG-AAACCAATATCTTTAGGC-AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCNATTANTTTGTACCCTCCATGCCCCCTAANTTTANTGGAAATTACACAT] [-] EMBL CD094773 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ] [-] EMBL CD094915 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ] [-] EMBL CD094797 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ] [-] EMBL CD097501 [ AACGGTTAACCTTGGAGTGGGTTCTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAA ] [+] EMBL CD136524 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG CTTT GTTT AAG ATGAAAG ] [+] EMBL CD136437 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTANAGATACATC GGATGCTACCACTANAGTTCAGAG CCAAGGAAAGATCATGA TAGCG AACG ] [+] EMBL CD121052 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCC ] [+] EMBL CD136601 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGNGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCT AATGCCCG AACATCAt ] [-] EMBL CD132181 [ TAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATC ] [+] EMBL CD188858 [ TGGAGTGGGTTTTTTATCTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG C ] [+] EMBL AA559489 [ ggTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGGATAACATCGCTTCCANAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCNCAATCCCA GGACTGGTANATAANTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCA ] [+] EMBL AA559382 [ CCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGGACTGGTAGATAAGTTCAAGAAGCAATATNCAGCTTTGGTCAA TTGAATATCCTNAAGATACATCGGGATGCTATCACTAAAGTTCAGAGCCCAAGGAAGAATCNTGANTNGCGAAANGCCAAACGTCNTGCNGATG C TTGGTTTAAAGAATGAAAagg ] [+] EMBL BG932182 [ GCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCG ] [+] EMBL CD132613 [ CTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTA ] [+] EMBL CD132572 [ CTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAGTATG AAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACT ] [+] EMBL CD188176 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAACCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTG ] [+] EMBL CD188182 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGC ATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG ANACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGG ] [+] EMBL CD188207 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGGTG C TT GTTTAAAG ATGAAAGGTAGTACAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAGAGGTCTGCACCGCCG ] [+] EMBL CD188160 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTACGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAGCTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC ] [+] EMBL CD132604 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAGGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGNTGTGCCAGAAATCAT ] [+] EMBL CD132570 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGANAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG ] [+] EMBL CD132603 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCCAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCATGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAAC AACTGCCTCCTGTAGA ] [+] EMBL CD132596 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAATGAAAGCTGCTCTA ] [+] EMBL CD132593 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATGNC TT GTTT AAG ATGAAAGGTAGTGCAGAAAAAAATGAAg ] [+] EMBL CD132567 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTG ] [+] EMBL CD132579 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGT ] [+] EMBL CD188206 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCCTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCCCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTCTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATG ] [+] EMBL CD188173 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACAT ] [+] EMBL CD188178 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGCAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACA ] [+] EMBL CD188226 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATGACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTCCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAA ] [+] EMBL CD188218 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGGTGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAA ] [+] EMBL CD132598 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGACAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGAAGCGAACGGTTTATCGAACGCCGGNNAACNNATATC TCAGGCAAATACGG CA TTTANAAA GTCTGCACCCGCGA TCATT GGACTTC ATTA ] [-] EMBL CD136552 [ GAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAG ] [-] EMBL CD136550 [ ACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGC TT GTCAATTTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAG ] [+] EMBL CD114489 [ AGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCACCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTC ] [-] EMBL CD130312 [ AAGTTCAAGAAGCAATATACAGC TT GTCAATTTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ] [+] EMBL CD068070 [ AGAAGC ATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTC ] [+] EMBL CD136449 [ CACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCA ] [-] EMBL CD130302 [ CAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ] [-] EMBL CD130367 [ CAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ] [+] EMBL AA559519 [ AAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGACATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTNCTAGTTACNTATTCNATTANTTTGTACCCTCCATGCCCCCTAANTTTANTGGAAATTACACAT] consensusID : consensus_11323#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 562 fasta sequence [TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG-CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCTCCATGCCCCCTAAGTTTAGTGG] [+] EMBL BF936670 [TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCTCCATGCCCCCTAAGTTTAGTGG] [+] EMBL CD132595 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGCCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATG ] [+] EMBL CD132590 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTAAG CCCA ] [+] EMBL CD132585 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAGAAAGCA ] [+] EMBL CD132576 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACCATG CCCATGTTGTCGCAATCCCAGGACTGGTAGA ] [+] EMBL CD132575 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCCATG TGTCGCAATCCCAGGACTGG ] [+] EMBL CD136506 [ tctacgCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCATTTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCTTGATAGCGAACGCCAAACGTCATGCAGA ] [+] EMBL CD093753 [ cgcaCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATT ] [+] EMBL CD093776 [ TATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCACTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATT ] [-] EMBL CD093766 [ ATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTA ] consensusID : consensus_11323#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 338 fasta sequence [TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTTACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGGTAGTGCAGAAAAA] [+] EMBL CD188169 [TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTTACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGGTAGTGCAGAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11323#0 TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCG 60 consensus_11323#1 ------------------------------------------------------------ consensus_11323#2 ------------------------------------------------------------ consensus_11323#0 GGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATT 120 consensus_11323#1 -----TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATT 55 consensus_11323#2 -------------------------------------------TGCCCGAAACATCAATT 17 ***************** consensus_11323#0 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGG----------- 169 consensus_11323#1 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGG----------- 104 consensus_11323#2 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTT 77 ************************************************* consensus_11323#0 ---------------------------ATAACATCGCTTCCAGAATCTTTGCCACCAATT 202 consensus_11323#1 ---------------------------ATAACATCGCTTCCAGAATCTTTGCCACCAATT 137 consensus_11323#2 ACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATT 137 ********************************* consensus_11323#0 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 262 consensus_11323#1 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 197 consensus_11323#2 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 197 ************************************************************ consensus_11323#0 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTT 322 consensus_11323#1 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTT 257 consensus_11323#2 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTT 257 ************************************** ********************* consensus_11323#0 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 382 consensus_11323#1 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 317 consensus_11323#2 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 317 ************************************************************ consensus_11323#0 ATGAAAGGTAGTGCAGAAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG 442 consensus_11323#1 ATGAAAG-----------------AAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG 360 consensus_11323#2 ATGAAAG--------------------GTAGTGCAGAAAAA------------------- 338 ******* * * * ** ** consensus_11323#0 GTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC 502 consensus_11323#1 GTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC 420 consensus_11323#2 ------------------------------------------------------------ consensus_11323#0 CGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCAT 562 consensus_11323#1 CGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCAT 480 consensus_11323#2 ------------------------------------------------------------ consensus_11323#0 TGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCNATTANTTTGTACCCT 622 consensus_11323#1 TGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCT 540 consensus_11323#2 ------------------------------------------------------------ consensus_11323#0 CCATGCCCCCTAANTTTANTGGAAATTACACAT 655 consensus_11323#1 CCATGCCCCCTAAGTTTAGTGG----------- 562 consensus_11323#2 --------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||