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Schistosoma mansoni
cluster # 11376 cluster # 11376       Sequences # 60       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11376#0 length = 1095 sequences # 34  
consensus_11376#1 length = 899 sequences # 7  
consensus_11376#2 length = 530 sequences # 17  
consensus_11376#3 length = 401 sequences # 1  
consensus_11376#4 length = 130 sequences # 1  

consensusID : consensus_11376#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 34
consensus length = 1095
fasta sequence
                              [AGTGTCGCGCATCATTCAGTAGTTCAGGCGTGGTCATGAGTAAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC-AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC-AAAACATCAAC-TTGTCAATAAACTTTCTCGTAACGCT-ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAATAATAATTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTATGTAAAGACGAGGATTGTCAAAGCAAGAGCCGCATCCCCACAGTTGAAGAGCATATGGAACTCACAACAAATCAACCAACATCAAAGTCAGAATCTCCAATCCGAACGTCAAGACAGTTCTACTGTAGGGAGCTGAAACTTGGAGAACTACCACAACCATCGGCAAAATGGTACAAGTATTTGTAGACAATTATCTACGTAAGATACTGAATACCCGTTGGTCGGATACTATCAGTAACAGTCTACTATGGCAGAAAACAACCCAGCTTCCAGATAGAGAGGAAATTAGGAAAAGACGTTGGAAGTGGACAGGACATACATTTCAGAAATC]

[-] EMBL CD179255             [AGTGTCGCGCATCATTCAGTAGTTCAGGCGTGGTCATGAGTAAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI977171             [                                         AAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATg                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD137401             [                                             TACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGGGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAGGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC ANAACATCAAC TCGTCAATAAACTTTCTCGNTACGCTNACTAAAG AGAATTGGCANAACGTCAGATGTTTGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD154581             [                                             TACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTCTCCATGTATGGATGCCGAAGAATTGAAGAAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD154679             [                                             TACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGATAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD116190             [                                              ACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD139051             [                                                                           CTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD154678             [                                                                                 TTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD154616             [                                                                                 TTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCCGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD154461             [                                                                                 TTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCACAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD154403             [                                                                                 TTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD154580             [                                                                                 TTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD116178             [                                                                                  TCTTGATTACAGCAACAAAGTGAGAAAAGGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCCGATTCCACGTCCCAAAATGTCTGTGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD135308             [                                                                                            AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD201719             [                                                                                                                    TTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGTCTGTGCGACTGAAGCACATTCCACGTCCC AAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATANAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTNCTGGAGAGCTAGCTC  AAACATCAAC TGGTC ATAAAC TTCTCGTACCGCT  CTTAAGAga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD137387             [                                                                                                                                                                TGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAGAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AW061625             [                                                                                                                                                                             AAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAG AAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGA CAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAAT AAAGCTACAGTC AGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAG ATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGCCCGCACAGTTTGTACTAATAATA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD138309             [                                                                                                                                                                                                                   ACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGAATGGATGCCGAAGAATTGAAGAACATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCAAGCTTTTGTGGCTAGAGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGATCCAGTGCTGACCAAGCTCGGAAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC GGTAAGATCGACGAAATANAAGCTACAGTCAAGTTCCAGATGTAGAAGGATCTTTGTCTGAATGACGCTGCTGGTCACGTCGAGATGACTCCTGAGGAGCTAGCTC ANAACATCAACTTTGTC ATAAACTTTCTCGTAACGCT ACTAAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD152521             [                                                                                                                                                                                                                                           GCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTCAAAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCC ACTAAAGAAGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD134994             [                                                                                                                                                                                                                                                                                       TTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD146202             [                                                                                                                                                                                                                                                                                                                 AAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD201469             [                                                                                                                                                                                                                                                                                                                                 AGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGCCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD146184             [                                                                                                                                                                                                                                                                                                                                   AAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD157694             [                                                                                                                                                                                                                                                                                                                                                                TTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC ACAGCTACGAC Tat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD157712             [                                                                                                                                                                                                                                                                                                                                                                 TACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTCCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC ACAGCAACAAC ATGTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD163808             [                                                                                                                                                                                                                                                                                                                                                                             GTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGGGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD163795             [                                                                                                                                                                                                                                                                                                                                                                             GTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAGTAAACTTTCTCGTAACGCT ACTAAAGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD112209             [                                                                                                                                                                                                                                                                                                                                                                                          CCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCGGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGT                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD136257             [                                                                                                                                                                                                                                                                                                                                                                                             TTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD136260             [                                                                                                                                                                                                                                                                                                                                                                                             TTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD135418             [                                                                                                                                                                                                                                                                                                                                                                                                                       GTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD157614             [                                                                                                                                                                                                                                                                                                                                                                                                                             GTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTC AATAAGATCGACGAAAAAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD157613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTCAAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD179462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATGACTCCTGAGGAGCTAGCTC AAAACATCAAC TTGTCAATAAACTTTCTCGTAACGCT ACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAAATACAATTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTATGTAAAGACGAGGATTGTCAAAGCAAGAGCCGCATCCCCACAGTTGAAGAGCATATGGAACTCACAACAAATCAACCAACATCAAAGTCAGAATCTCCAATCCGAACGTCAAGACAGTTCTACTGTAGGGAGCTGAAACTTGGAGAACTACCACAACCATCGGCAAAATGGTACAAGTATTTGTAGACAATTATCTACGTAAGATACTGAATACCCGTTGGTCGGATACTATCAGTAACAGTCTACTATGGCAGAAAACAACCCAGCTTCCAGATAGAGAGGAAATTAGGAAAAGACGTTGGAAGTGGACAGGACATACATTTCAGAAATC]


>consensus_11376#0 AGTGTCGCGCATCATTCAGTAGTTCAGGCGTGGTCATGAGTAAGGTACCGAAGGATCTTC TGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTA CCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT TCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTG GAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAG AATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACG CTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGA CCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCG ACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTG TTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTCAAAACATCAACTTGTCAATAAACT TTCTCGTAACGCTACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTA CTATGGGTAGACCGCACAGATTGTACTAATAATAATTAAAATCGGGTGCTTTTTTTACTT CTCAATGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTATGTAAAGACGAGGATT GTCAAAGCAAGAGCCGCATCCCCACAGTTGAAGAGCATATGGAACTCACAACAAATCAAC CAACATCAAAGTCAGAATCTCCAATCCGAACGTCAAGACAGTTCTACTGTAGGGAGCTGA AACTTGGAGAACTACCACAACCATCGGCAAAATGGTACAAGTATTTGTAGACAATTATCT ACGTAAGATACTGAATACCCGTTGGTCGGATACTATCAGTAACAGTCTACTATGGCAGAA AACAACCCAGCTTCCAGATAGAGAGGAAATTAGGAAAAGACGTTGGAAGTGGACAGGACA TACATTTCAGAAATC



consensusID : consensus_11376#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 899
fasta sequence
                              [AGGTTTTTTAGTAAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCCATAAGATCGACGAAGTAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGT-CCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTCAAAACATCAACTTGTCAATAAACTTTCTCGTAACGCTACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAAATACAATTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTGTACGTCGTTGTATGGTCCATTGTAATGTGCAATTAAGCAGTGAATAATAGTGCGTTTATTCTATCTGTCTCGATAAAGTG]

[+] EMBL CD083589             [AGGTTTTTTAGTAAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCCCTAGTCCATAAG                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD135517             [                                                     TCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATCGTGTGGGGAGGCTAATCGCCGCATATTACAGGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD154740             [                                                     TCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD084421             [                                                                                       TTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCAATAGTCCATAAGATC                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD137695             [                                                                                               GACTGTTGAGCTAC AATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTATGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD126881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAGTAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGT CCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCTCAAAACATCAACTTGTCAATAAACTTTCTCGTAACGCTACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAAATACAATTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTGTACGTCGTTGTATGGTCCATTGTAATGTGCAATTAAGCAGTGAATAATAGTGCGTTTATTCTATCTGTCTCGATAAAGTG]
[-] EMBL SMAA40612            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGATGAAGAAGGTCCCTTTNTCTGAATGTCNCTGTTGGTCACGTGAAGATGACTCCTGAGGNGCTAGCTCAAAACATCAACTTGTCAATAAACTTTCTCGTAACGCTACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATGGGTAGNCCGCACAGATTGTACTAAATACAAT                                                                                                                                                    ]


>consensus_11376#1 AGGTTTTTTAGTAAGGTACCGAAGGATCTTCTGCTGCGGTCATGTGCTGATATTCTTGAT TACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTG AAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGGTAAGTTTATGAA CCCCTACCCAGGGTTCTAAAATTGTGTGGGGAGGCTAATCGCCGCATATTACAAGTCGGA TCTTATTATAGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGAT GAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTG AAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTT GTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAG TTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCCATAAGATCGACGAA GTAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGT CACGTGAAGATGACTCCTGAGGAGCTAGCTCAAAACATCAACTTGTCAATAAACTTTCTC GTAACGCTACTAAAGAAGAATTGGCAAAACGTCAGATGTTTGTACATCAAAAGTACTATG GGTAGACCGCACAGATTGTACTAAATACAATTAAAATCGGGTGCTTTTTTTACTTCTCAA TGACAACCTTGGTCACCGGTTCCTGATATGCTGCAACTGTACGTCGTTGTATGGTCCATT GTAATGTGCAATTAAGCAGTGAATAATAGTGCGTTTATTCTATCTGTCTCGATAAAGTG



consensusID : consensus_11376#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 530
fasta sequence
                              [TGGTCATGAGTA-AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG-GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCNTACAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAA]

[+] EMBL CD120291             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCC AAATGTCTGTGTGTGTGCTTGGAGATGAAC ACACTGTGACGAGGCC AAGCAGCAGGTTTT CATG                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD120348             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120201             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120351             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCCACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGGACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120196             [TGGTCATGAGTA AGCGACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120451             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD120483             [TGGTCATGAGTA AGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD115985             [  tTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCNTACAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAA]
[-] EMBL CD160876             [                                  AAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGA                                                          ]
[-] EMBL CD160845             [                                  AAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAGGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGA                                                          ]
[+] EMBL CD153735             [                                                    GAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTCCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATG                                                     ]
[+] EMBL AI820473             [                                                                                              AAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGATAGTGAAACCGTTATTCGTGAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGAAGAGGTTTCCGAGTGCAGTCACACACAACGAGCCAC                                                                                                                                                 ]
[-] EMBL CD097836             [                                                                                                                                     CGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCTATAAGATCGACGAAATAAAAGCTACA                                                                                                                 ]
[+] EMBL CD090703             [                                                                                                                                                                                                          CCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAGTAAAAGC                                                                                                                     ]
[-] EMBL CD157683             [                                                                                                                                                                                                                                                                                                            CGTGATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGTCCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAtca                                          ]
[+] EMBL CD123243             [                                                                                                                                                                                                                                                                                                              TTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCT                                                                       ]
[+] EMBL CD130807             [                                                                                                                                                                                                                                                                                                                                       GGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAGAAGGTCCTTTGTCTGAAT                                                                             ]


>consensus_11376#2 TGGTCATGAGTAAGCAACAAAGTGAGAAAACGAAAGTTTACCGAGACTGTTGAGCTACAA ATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTG AAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGAC GAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAA GAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACC GTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCG AGTGCAGTCACACACAACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTC AAGTTCCAGATGAAGAAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACT CCTGAGGAGCNTACAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAA



consensusID : consensus_11376#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 401
fasta sequence
                              [TTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGGCGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCATAAGATCGACGAAATAAAAGCTACAGTCAATTCCAGATGAAGAAAGTTCCGTAACGCCG]

[-] EMBL CD128256             [TTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAACAACACTGTGGCGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCATAAGATCGACGAAATAAAAGCTACAGTCAATTCCAGATGAAGAAAGTTCCGTAACGCCG]


>consensus_11376#3 TTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGA CTGTGCGACTGAAGCACATTCCACGTCCCAAAATGTCTGTGTGTGTGCTTGGAGATGAAC AACACTGTGGCGAGGCCAAAGCAGCAGGTTTTCCATGTATGGATGCCGAAGAATTGAAGA AAATCAGCAAAGAGAAAAAGCCGTTGAAAAAACTCGCCAAGAGTTACCACGCTTTTGTGG CTAGTGAAACCGTTATTCGTCAGTTTACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCG GGAAGTTTCCGAGTGCAGTCACACACAACGAGCCACTAGTCATAAGATCGACGAAATAAA AGCTACAGTCAATTCCAGATGAAGAAAGTTCCGTAACGCCG



consensusID : consensus_11376#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 130
fasta sequence
                              [AAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAATATGGCGGCCTCTTGTG]

[+] EMBL CD096613             [AAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAATATGGCGGCCTCTTGTG]


>consensus_11376#4 AAACGAAAGTTTACCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAG AAGGACAAGAGATTCACTGGGACTGTGCGACTGAAGCACATTCCACGTCCCAATATGGCG GCCTCTTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11376#0      AGTGTCGCGCATCATTCAGTAGTTCAGGCGTGGTCATGAGTAAGGTACCGAAGGATCTTC 60
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      -----------------------------AGGTTTTTTAGTAAGGTACCGAAGGATCTTC 31
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      TGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTA 120
consensus_11376#4      -----------------------------------------------AAACGAAAGTTTA 13
consensus_11376#2      --------------------TGGTCATGAGTAAGCAACAAAGTGAGAAAACGAAAGTTTA 40
consensus_11376#1      TGCTGCGGTCATGTGCTGATATTCTTGATTACAGCAACAAAGTGAGAAAACGAAAGTTTA 91
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT 180
consensus_11376#4      CCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT 73
consensus_11376#2      CCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT 100
consensus_11376#1      CCGAGACTGTTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT 151
consensus_11376#3      ---------TTGAGCTACAAATAGCGTTGAAGAACTATGATGTTCAGAAGGACAAGAGAT 51
                                ***************************************************

consensus_11376#0      TCACTGGGACTGTGCG-------------------------------------------- 196
consensus_11376#4      TCACTGGGACTGTGCG-------------------------------------------- 89
consensus_11376#2      TCACTGGGACTGTGCG-------------------------------------------- 116
consensus_11376#1      TCACTGGGACTGTGCGGTAAGTTTATGAACCCCTACCCAGGGTTCTAAAATTGTGTGGGG 211
consensus_11376#3      TCACTGGGACTGTGCG-------------------------------------------- 67
                       ****************                                            

consensus_11376#0      ----------------------------------------ACTGAAGCACATTCCACGTC 216
consensus_11376#4      ----------------------------------------ACTGAAGCACATTCCACGTC 109
consensus_11376#2      ----------------------------------------ACTGAAGCACATTCCACGTC 136
consensus_11376#1      AGGCTAATCGCCGCATATTACAAGTCGGATCTTATTATAGACTGAAGCACATTCCACGTC 271
consensus_11376#3      ----------------------------------------ACTGAAGCACATTCCACGTC 87
                                                               ********************

consensus_11376#0      CCAAAATGTCTGTGTGT-GTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCA 275
consensus_11376#4      CCAATATGGCGGCCTCTTGTG--------------------------------------- 130
consensus_11376#2      CCAAAATGTCTGTGTGT-GTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCA 195
consensus_11376#1      CCAAAATGTCTGTGTGT-GTGCTTGGAGATGAACAACACTGTGACGAGGCCAAAGCAGCA 330
consensus_11376#3      CCAAAATGTCTGTGTGT-GTGCTTGGAGATGAACAACACTGTGGCGAGGCCAAAGCAGCA 146
                       **** *** * *  * * ***                                       

consensus_11376#0      GGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTG 335
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      GGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTG 255
consensus_11376#1      GGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTG 390
consensus_11376#3      GGTTTTCCATGTATGGATGCCGAAGAATTGAAGAAAATCAGCAAAGAGAAAAAGCCGTTG 206
                                                                                   

consensus_11376#0      AAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTT 395
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      AAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTT 315
consensus_11376#1      AAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTT 450
consensus_11376#3      AAAAAACTCGCCAAGAGTTACCACGCTTTTGTGGCTAGTGAAACCGTTATTCGTCAGTTT 266
                                                                                   

consensus_11376#0      ACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACAC 455
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACAC 375
consensus_11376#1      ACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACAC 510
consensus_11376#3      ACAAGGACAGTGGTTCCAGTGCTGACCAAGTTCGGGAAGTTTCCGAGTGCAGTCACACAC 326
                                                                                   

consensus_11376#0      AACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAG 515
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      AACGAGCCACTAGTCAATAAGATCGACGAAATAAAAGCTACAGTCAAGTTCCAGATGAAG 435
consensus_11376#1      AACGAGCCACTAGTCCATAAGATCGACGAAGTAAAAGCTACAGTCAAGTTCCAGATGAAG 570
consensus_11376#3      AACGAGCCACTAGTC-ATAAGATCGACGAAATAAAAGCTACAGTCAA-TTCCAGATGAAG 384
                                                                                   

consensus_11376#0      AAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCT 575
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      AAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCNTACA 495
consensus_11376#1      AAGGTCCTTTGTCTGAATGTCGCTGTTGGTCACGTGAAGATGACTCCTGAGGAGCTAGCT 630
consensus_11376#3      AAAGTTCCGT-----AACGCCG-------------------------------------- 401
                                                                                   

consensus_11376#0      CAAAACATCAACTTGTCAATAAACTTTCTCGTAACGCTACTAAAGAAGAATTGGCAAAAC 635
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ATAGCGTTGAAGAACTATGATGTTCAGAAGGACAA------------------------- 530
consensus_11376#1      CAAAACATCAACTTGTCAATAAACTTTCTCGTAACGCTACTAAAGAAGAATTGGCAAAAC 690
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      GTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAATAATAA 695
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      GTCAGATGTTTGTACATCAAAAGTACTATGGGTAGACCGCACAGATTGTACTAAATACAA 750
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      TTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATG 755
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      TTAAAATCGGGTGCTTTTTTTACTTCTCAATGACAACCTTGGTCACCGGTTCCTGATATG 810
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CTGCAACTATGTAAAGACGAGGATTGTCAAAGCAAGAGCCGCATCCCCACAGTTGAAGAG 815
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      CTGCAACTGTACGTCGTTGTATGGTCCATTGTAATGTGCAATTAAGCAGTGAATAATAGT 870
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      CATATGGAACTCACAACAAATCAACCAACATCAAAGTCAGAATCTCCAATCCGAACGTCA 875
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      GCGTTTATTCTATCTGTCTCGATAAAGTG------------------------------- 899
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      AGACAGTTCTACTGTAGGGAGCTGAAACTTGGAGAACTACCACAACCATCGGCAAAATGG 935
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      TACAAGTATTTGTAGACAATTATCTACGTAAGATACTGAATACCCGTTGGTCGGATACTA 995
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      TCAGTAACAGTCTACTATGGCAGAAAACAACCCAGCTTCCAGATAGAGAGGAAATTAGGA 1055
consensus_11376#4      ------------------------------------------------------------
consensus_11376#2      ------------------------------------------------------------
consensus_11376#1      ------------------------------------------------------------
consensus_11376#3      ------------------------------------------------------------
                                                                                   

consensus_11376#0      AAAGACGTTGGAAGTGGACAGGACATACATTTCAGAAATC 1095
consensus_11376#4      ----------------------------------------
consensus_11376#2      ----------------------------------------
consensus_11376#1      ----------------------------------------
consensus_11376#3      ----------------------------------------
                                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)