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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11406#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 40 consensus length = 688 fasta sequence
[TTGGCGTTTAATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA-ACTTCG-ATGCTGTCATGTCAAAGCTAGGTGTCTCATG-GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA-TGGATGGGGATAAAATGAC-TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT-GTACGTTCAAGTTCGGCGAGGAATTCGATG-AAAAA-ACAAGTGACGGC-AGAAATGTCA--AGT-CA-GTTGTTG-AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA-GATCCCAAAAACACAACTGTA-ATC-GTTCGTGAAGT-GGATGGTGATACTATGAAAACGAC-TGTGAC-TGTT-GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA-GGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGT-GGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGCTTATTGTTGTAAAA]
[+] EMBL SMFABP14 [TTGGCGTTTAATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGT GGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGCTTATTGTTGTAAAA]
[+] EMBL AI976909 [ GTTTAATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGAGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGCGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTTACGCCTCCAAATGAACACTGATtt ]
[+] EMBL AI976944 [ AATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTTACCTTCACAA TGGATGGGGATAAAATGAC TATGTTTACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATA ]
[+] EMBL CD084150 [ ATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAA ]
[-] EMBL CD062537 [ gGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTagccac ]
[+] EMBL AI975295 [ ctgATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGT GGATAAATTNTGCTA ]
[+] EMBL AI977121 [ gATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGGT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTNCAAATGAACACTG ]
[+] EMBL SMAA25606 [ ctgATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA AC AGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAATTCCGAGTCGAAGTTAACGC AACTCAAGTA GATCCC AAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATA TATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCA TCGCAATTATAAACGACTATCCT ACG CT CAAATGAACACTGNTATTTGCTCA GGGTTTTTTTGGAA CGC TGTATTCCTACTATTTTTATTAC ATGAT ]
[+] EMBL CD082884 [ TACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAATTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTNTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGANTATCACCGGTGGGAT AATTNTGCTA ]
[-] EMBL CD062704 [ AGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATTAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATGGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAA ACAAGTGACGGC AGAAATGTCA AGTACA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCGATAAgatgn ]
[-] EMBL CD062546 [ AGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAATTCCGAGTCGAAGTT CCAACTCTAGTA ATC ]
[+] EMBL CD180828 [ ATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGA CT GTTGCTG AAGAAGACTCCGATGCCATTCTAACGCATACTCAAGTA TATCCAACGCCCACAACTGAACATCTGATCTTGAAGT GGAGGGTGATACTATGACGACGACATGTGACATGAT GGTGACTACACTGACATTCACCACTGTAGACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATC ]
[+] EMBL AF492389 [ TTCTTGGGAAAGTGGAAACTTAGCGAGTCACACA ACTTCG ATGCTGTCACGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACG ]
[+] EMBL SM605 [ GTCACACAGGNTTCGNATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCANGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTGAAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGGATCCCAAAAACACAACTGTA ATC GTTCGTGAAGTGGGATGGTGATACTATGAAAACGAC TGTGAC TGTTGGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGNTGAGGGGTTTTTTGGGNACTGCTGGTNTTCCTACTATTTNTATTACAATGATGATNATCACCGGG GGNT AATTTGGGTATG ATTTTNCG TCTTTNTTAATTAA CA TCTCGCA TTCAATAAAT CTG ]
[+] EMBL CD194239 [ CA ACTTCG ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACAC ]
[-] EMBL CD167594 [ G ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATG AAACG C TG ]
[+] EMBL CD167621 [ ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTCCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC T ]
[-] EMBL CD178710 [ ATGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATA ]
[-] EMBL CD167730 [ TGCTGTCATGTCAAAGCTAGGTGTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATG ]
[+] EMBL CD062443 [ accTGTGTCATGAGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA A AAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAA ]
[-] EMBL CD066444 [ GTCTCATG GGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACATCTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTAT ]
[-] EMBL CD127818 [ CAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAANTGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAAC ]
[-] EMBL CD127757 [ CAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAGGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAACCGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGCAATCC ]
[-] EMBL CD127687 [ CAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAG TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACGCATATTTGCTGA GGGTTTTTTTGTA ]
[-] EMBL CD065205 [ CAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACANCTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT G ]
[+] EMBL CD178233 [ GGGAACACAGTGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGACGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTAT ]
[+] EMBL CD169963 [ TGACCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTT AAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAATACAAGTG CGGCAAGATATGTCA AGT CA GTTGTTG AATAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGATGT GG ]
[+] EMBL CD178683 [ CCCCAACTGTAACCTTCACAA TGGATGGGGATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTAT ]
[+] EMBL AW061361 [ A TGGATGGGGATAAAATGACGTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCTACTA TTTTATTACAATGATGATAATCACCGAT GGATAAATTTTCCTATGCATGTATCGCTCTATATTAATTAATCATTCT ]
[+] EMBL CD169941 [ GGATAAAATGAC TATGTTAACAGAGTCAACTTT AAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAT ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GG ]
[+] EMBL CD169923 [ GATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GG ]
[+] EMBL CD169876 [ GATAAAATGAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAACGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GG ]
[+] EMBL CD062466 [ GAC TATGTTAACAGAGTCAACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAA ]
[+] EMBL AA960712 [ AACTTTCAAAAATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCATTTA ]
[-] EMBL CD072098 [ cancTTCAAAAATC TTCTTNGTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCA ]
[+] EMBL CD060693 [ AAAATCTTTCTT GTACGTTCAAGTTCGGTGAGGAATTCGATGAAAAAA ACAAGTGACGGG AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATgggt ]
[-] EMBL CD167591 [ ATCTTTCTT GTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAA ACAAGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGC AACTCAAGTA GATCCCAAAAACACAACTGTG ATC GTTCGTGAAGT GGATGGTGA ACTATG ]
[+] EMBL BG932625 [ AGTGACGGC AGAAATGTCA AGT CA GTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCT ]
[-] EMBL CD167694 [ cgnnGC AGAAATGTCANNAGT CANGTTGTTG AAAAAAATTCCGAGTCGAAGTTAACGC AACTCAAGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATG AACGAC T ]
[-] EMBL SMT14374 [ AGTA GATCCCAAAAACACAACTGTA ATC GTTCGTGAAGT GGATGGTGATACTATGAAAACGAC TGTGAC TGTT GGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGA GGGTTTTTTTGTAACCGCTTGTATTCCTACTANTTTTATTACAATGATGATAATCACCGGT GGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCANTCTCGCATTTCAATAA ]
consensusID : consensus_11406#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 679 fasta sequence
[CTTTTGTGA-T-CAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGGATGGTGATACTATGAAAACGACTGTGACTGTTGGTGACGCTACTGCCATTCGCATTTATGAACGACTATCCTAACGCCTACTAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATCTCTATTACAATGATGATAATCACCGATGGATACATTGTGCTATGCATGTATCGATCTATATTAATTAATCATTCTCGCATTCCAATGAATACTGCATATTG]
[+] EMBL CD200019 [CTTTTGTGA T TTGTTGCATGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGGATGGTGATACTATGAAAACGACTGT ]
[+] EMBL CD186201 [ GTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTTACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATTGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGA ]
[+] EMBL CD079194 [ gagt c CAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGCCGTTCAAGCGTATCAGAAGCATCAAACTAGCTGAAAACAATGGCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCTATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAACAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAATGTAACGCAGACTCAAGTAGATCCCAAAAACACACCTGTAATCGTTCGTGAAGTGGATGCTGATACTATGATAACGACTGTGACTGTTGGTGACGCTACTGCCATTCGCATTTATGAACGACTATCCTAACGCCTACTAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATCTCTATTACAATGATGATAATCACCGATGGATACATTGTGCTATGCATGTATCGATCTATATTAATTAATCATTCTCGCATTCCAATGAATACTGCATATTG]
consensusID : consensus_11406#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 570 fasta sequence
[GCGAGTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGCT]
[+] EMBL CD180911 [GCGAGTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATG ]
[+] EMBL CD180760 [GCGAGTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTANCATGA ]
[+] EMBL CD137771 [ GTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTA ]
[+] EMBL CD078158 [ CAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAA ]
[+] EMBL AW017342 [ CTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTCCTATGCATGTATCGNTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGC ]
[+] EMBL CD170400 [ CCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGACAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACCGTAACCTTCACAATGGATGGGGATAAAATGACTATGTCAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGC ]
[+] EMBL CD078598 [ CTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATANATACTGC ]
[-] EMBL CD073062 [ TACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGCT]
[-] EMBL CD187192 [ GTATCAGAAGCATCAAACTAGATGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTAATACA ]
[+] EMBL AF492390 [ TTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACG ]
[-] EMBL AW017465 [ AAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATTAAAAAACAAGTGACGGCAAAAATGTCAAGACTGTGACTGTTGGTGACGTTACTGCCATTTGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTGCTAAGCATGTATCGTTCTATATTAATTAATCATTCTCGCATTTCAATAAATACTGC ]
[+] EMBL SM3621 [ TGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAACTGCTTGTATTCCTACTATTTTTATTACAATGATGATAATCACCGGTGGATAAATTTTGC ]
consensusID : consensus_11406#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 478 fasta sequence
[TCGGTGGGTCGGTCNAGGGGTATTNAGAGGCANCAAACTTGGTGGAAACAAATGTCTTNGTTTCTGGGGAANGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATCGATGAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTGGTGGAAAAAATCCGAGTCGAGGTAACGCAACTCAAGTAGATCCCAAAACANACTGTNATCGTCCGGAAGTGGTGGNGATACTATGAAACGATGTGACTGTGGNGACGTTACTGCCATCCGAATTNTAACGATTTCCTAACGCCCCAAATAACACTGATNTTGGTGAGGGTTTNNGGGACT]
[+] EMBL SM657 [TCGGTGGGTCGGTCNAGGGGTATTNAGAGGCANCAAACTTGGTGGAAACAAATGTCTTNGTTTCTGGGGAANGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATCGATGAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTGGTGGAAAAAATCCGAGTCGAGGTAACGCAACTCAAGTAGATCCCAAAACANACTGTNATCGTCCGGAAGTGGTGGNGATACTATGAAACGATGTGACTGTGGNGACGTTACTGCCATCCGAATTNTAACGATTTCCTAACGCCCCAAATAACACTGATNTTGGTGAGGGTTTNNGGGACT]
consensusID : consensus_11406#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 369 fasta sequence
[ACACAGTGACCCCAANTGTAACCTNCACANTGGATGGGGATAAAATGANTATGTTAACAGAGTCAACTTTCAAAATTCTTTCTTGTACGTTCAAGTTCGGNGAGGAATTCGATGAAAAATCANGTGACGGNAGAANTGTCAAGTCAGTTGGTTGAAAAANTTCCGAGTCGAAGTTAACGCAAACTCAAGTAGGATCCCAAAAACACAACTGTNNTCGTCCGTGAAGTGGATGGTGATACTATGAAANCGACTGTGACTGTTGGTGGACGGTNACTGCCATTCGCAATTATTAAACGNACTATCCCNAACGCCCTCCAAATGAAACACTGANTATTTGGGTTGAGGGGTTTTNCTGGGGAACTNGTCTTG]
[+] EMBL SM265 [ACACAGTGACCCCAANTGTAACCTNCACANTGGATGGGGATAAAATGANTATGTTAACAGAGTCAACTTTCAAAATTCTTTCTTGTACGTTCAAGTTCGGNGAGGAATTCGATGAAAAATCANGTGACGGNAGAANTGTCAAGTCAGTTGGTTGAAAAANTTCCGAGTCGAAGTTAACGCAAACTCAAGTAGGATCCCAAAAACACAACTGTNNTCGTCCGTGAAGTGGATGGTGATACTATGAAANCGACTGTGACTGTTGGTGGACGGTNACTGCCATTCGCAATTATTAAACGNACTATCCCNAACGCCCTCCAAATGAAACACTGANTATTTGGGTTGAGGGGTTTTNCTGGGGAACTNGTCTTG]
consensusID : consensus_11406#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence
[TCGGTCCGAGGCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCCTCAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAGTGACGGCAGAAATGTCAAGTCAGTTGTNGAAA]
[+] EMBL CD077957 [TCGGTCCGAGGCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGCTAAAAATCGGTGGTCGTTCAAGCGTATCAGAAGCATCAAACTAGTTGAAAACAATGTCTAGTTTCTTGGGAAAGTGGAAACTTAGCGAGTCACACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCCTCAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAGTGACGGCAGAAATGTCAAGTCAGTTGTNGAAA]
consensusID : consensus_11406#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 334 fasta sequence
[CACGAGTCACATGTGGACATTTCCACGAGTCGCACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAAGTTAACGCAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGGATGGTTGATACTAT]
[-] EMBL CD167500 [CACGAGTCACATGTGGACATTTCCACGAGTCGCACAACTTCGATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAAATTCCGAGTCGAAGTTAACGCAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGGATGGTTGATACTAT]
[+] EMBL CD167628 [ ATGCTGTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCT ]
[-] EMBL CD167665 [ TGCTCTCATGTCAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAACCTTCACAATGGATGGGGATAATATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGT ]
consensusID : consensus_11406#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 324 fasta sequence
[CGCGNNGAATTCGATTGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATG-AAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGTATGGTGATACTATGAAAACGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAA]
[-] EMBL CD144095 [CGCGNNGAATTCGATTGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATG AAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGTATGGTGATACTATGAAAACGACTGTGACTGTTGGTGACGTTACTGCCATTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACA ]
[+] EMBL CD169962 [ GATAAAATGACTATGTTAACAGAGTCAACTTT AAAAATCTTTCTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAAACAAGTGACGGCAGAAATGTCAAGTCAGTTGTTGAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGg ]
[+] EMBL CD127927 [ agactagGTA GGTGATACTATGAAAAC ATTGTGACTGTTGGTGACGTTACTGCCCTTCGCAATTATAAACGACTATCCTAACGCCTCCAAATGAACACTGATATTTGCTGAGGGTTTTTTTGTAA]
consensusID : consensus_11406#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 96 fasta sequence
[TATTGTATTGTGATAGATGGGGGATCTACTTGAGTTTGCGTTAACTTCGACTCGGAATTTTTTCAACAACTGACTTGACATTTCTGCCGTCACTTG]
[+] EMBL BG930153 [TATTGTATTGTGATAGATGGGGGATCTACTTGAGTTTGCGTTAACTTCGACTCGGAATTTTTTCAACAACTGACTTGACATTTCTGCCGTCACTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11406#4 ------------------------------------------------------------
consensus_11406#7 ------------------------------------------------------------
consensus_11406#2 GCGAGTGAGTCCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGC 60
consensus_11406#5 TCGGTCCGAGGCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGC 60
consensus_11406#1 -CTTTTGTGATCAGGAGTCTGATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGC 59
consensus_11406#3 ------------------------------------------------------------
consensus_11406#6 ------------------------------------------------------------
consensus_11406#0 TTGGCGTTTAATCAATCGCGAATCCTACACCAGAAGATCAGTATCAGATTTACAATCGGC 60
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 ------------------------------------------------------------
consensus_11406#7 ------------------------------------------------------------
consensus_11406#2 TAAAAATCGGTGGTC--GTTCAAGCGTAT-CAGAAGCATCAAACTAGTTGAAAACAATG- 116
consensus_11406#5 TAAAAATCGGTGGTC--GTTCAAGCGTAT-CAGAAGCATCAAACTAGTTGAAAACAATG- 116
consensus_11406#1 TAAAAATCGGTGGTC--GTTCAAGCGTAT-CAGAAGCATCAAACTAGTTGAAAACAATG- 115
consensus_11406#3 ------TCGGTGGGTCGGTCNAGGGGTATTNAGAGGCANCAAACTTGGTGGAAACAAATG 54
consensus_11406#6 ------------------------------------------------------------
consensus_11406#0 TAAAAATCGGTGGTC--GTTCAAGCGTAT-CAGAAGCATCAAACTAGTTGAAAACAATG- 116
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 ------------------------------------------------------------
consensus_11406#7 ------------------------------------------------------------
consensus_11406#2 -TCTAGTTTCTTGGGAAAGTGGAAACTTA-GCGAGTCACACAACTTCGATGCTGTCATGT 174
consensus_11406#5 -TCTAGTTTCTTGGGAAAGTGGAAACTTA-GCGAGTCACACAACTTCGATGCTGTCATGT 174
consensus_11406#1 -TCTAGTTTCTTGGGAAAGTGGAAACTTA-GCGAGTCACACAACTTCGATGCTGTCATGT 173
consensus_11406#3 TCTTNGTTTCTGGGGAANGTGGAAACTTA-GCGAGTCACACAACTTCGATGCTGTCATGT 113
consensus_11406#6 ------CACGAGTCACATGTGGACATTTCCACGAGTCGCACAACTTCGATGCTGTCATGT 54
consensus_11406#0 -TCTAGTTTCTTGGGAAAGTGGAAACTTA-GCGAGTCACACAACTTCGATGCTGTCATGT 174
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 ---------------------------------------ACACAGTGACCCCAANTGTAA 21
consensus_11406#7 ------------------------------------------------------------
consensus_11406#2 CAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAA 234
consensus_11406#5 CAAAGCTAGGTGTCTCATGGGCAACTCCTCAGATTGGGAACACAGTGACCCCAACTGTAA 234
consensus_11406#1 CAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAA 233
consensus_11406#3 CAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAA 173
consensus_11406#6 CAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAA 114
consensus_11406#0 CAAAGCTAGGTGTCTCATGGGCAACTCGACAGATTGGGAACACAGTGACCCCAACTGTAA 234
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 CCTNCACANTGGATGGGGATAAAATGANTATGTTAACAGAGTCAACTTTCAAAATTCTTT 81
consensus_11406#7 CGCGNNGAATTCGATTGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 60
consensus_11406#2 CCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 294
consensus_11406#5 CCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 294
consensus_11406#1 CCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 293
consensus_11406#3 CCTTCACAATGGATGGGGATAAAATGACTATGT-AACAGAGTCAACTTTCAAAAATCTTT 232
consensus_11406#6 CCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 174
consensus_11406#0 CCTTCACAATGGATGGGGATAAAATGACTATGTTAACAGAGTCAACTTTCAAAAATCTTT 294
consensus_11406#8 ----------------------------TATTGTATTGTGATAGATGGGGGATCTACTTG 32
*** * * * * ***
consensus_11406#4 CTTGTACGTTCAAGTTCGGNGAGGAATTCGATGAAAAATCANGTGACGGNAGAANTGTCA 141
consensus_11406#7 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCA 120
consensus_11406#2 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCA 354
consensus_11406#5 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACA-GTGACGGCAGAAATGTCA 353
consensus_11406#1 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCA 353
consensus_11406#3 CTTGTACGTTCAAGTTCGGCGAGGAAT-CGATGAAAAA-CAAGTGACGGCAGAAATGTCA 290
consensus_11406#6 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCA 234
consensus_11406#0 CTTGTACGTTCAAGTTCGGCGAGGAATTCGATGAAAAAACAAGTGACGGCAGAAATGTCA 354
consensus_11406#8 AGTTTGCGTT-AACTTCGACTCGGAATTTTTTCAA----CAACTGACTTGACATTTCTGC 87
* * **** ** **** ***** * ** ** **** * * * *
consensus_11406#4 AGTCAGTTGGTTGAAAAANT---------------------------------------- 161
consensus_11406#7 AGTCAGTTG-TTGAAAAAAT---------------------------------------- 139
consensus_11406#2 AGACTGTGA-CTGTTG-------------------------------------------- 369
consensus_11406#5 AGTCAGTTG-TNGAAA-------------------------------------------- 368
consensus_11406#1 AGTCAGTTG-TTGAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAA 412
consensus_11406#3 AGTCAGTGG-TGGAAAAAA----------------------------------------- 308
consensus_11406#6 AGTCAGTTG-TTGAAAAAAAT--------------------------------------- 254
consensus_11406#0 AGTCAGTTG-TTGAAAAAAATTCCGAGTCGAAGTTAACGCAAACTCAAGTAGATCCCAAA 413
consensus_11406#8 CGTCACTTG--------------------------------------------------- 96
* * *
consensus_11406#4 ----------------------------------------------------TCCGAGTC 169
consensus_11406#7 ----------------------------------------------------TCCGAGTC 147
consensus_11406#2 ------------------------------------------------------------
consensus_11406#5 ------------------------------------------------------------
consensus_11406#1 AACACAACTGTAATCGTTCGTGAAGTGGATGGTGATACTATGAAAACGACTGTGACTGTT 472
consensus_11406#3 ----------------------------------------------------TCCGAGTC 316
consensus_11406#6 ----------------------------------------------------TCCGAGTC 262
consensus_11406#0 AACACAACTGTAATCGTTCGTGAAGTGGATGGTGATACTATGAAAACGACTGTGACTGTT 473
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 GAAGTTAACGCAAACTCAAGTAGGATCCCAAAAACACAACTGTNNTCGTCCGTGAAGTGG 229
consensus_11406#7 GAAGTTAACGCAAACTCAAGTAG-ATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGT 206
consensus_11406#2 -GTGACGTTACTG-CCATTCGCA-ATTATAAACGACTATCCTAACGCCTCCAAATGAACA 426
consensus_11406#5 ------------------------------------------------------------
consensus_11406#1 GGTGACGCTACTG-CCATTCGCA-TTTATGAACGACTATCCTAACGCCTACTAATGAACA 530
consensus_11406#3 GAGGT-AACGCAA-CTCAAGTAG-ATCCCAAAA-CANA-CTGTNATCGTCCG-GAAGTGG 370
consensus_11406#6 GAAGTTAACGCAA-CTCAAGTAG-ATCCCAAAAACACAACTGTAATCGTTCGTGAAGTGG 320
consensus_11406#0 GGTGACGTTACTG-CCATTCGCA-ATTATAAACGACTATCCTAACGCCTCCAAATGAACA 531
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 ATGGT-GATACTATGAAANCGACTGTGACTGTTGGTGGACGGTNACTGCCATTCGCAATT 288
consensus_11406#7 ATGGT-GATACTATGAAAACGACTGTGACTGTTGGTGAC--GTTACTGCCATTCGCAATT 263
consensus_11406#2 CTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATG 486
consensus_11406#5 ------------------------------------------------------------
consensus_11406#1 CTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATCTCTATTACAATG 590
consensus_11406#3 -TGGN-GATACTATGAAACGATGTGACTGTGGNGACGTTACTGCCATCCGAATTNTAACG 428
consensus_11406#6 ATGGTTGATACTAT---------------------------------------------- 334
consensus_11406#0 CTGATATTTGCTGAGGGTTTTTTTGTAACCGCTTGTATTCCTACTATTTTTATTACAATG 591
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 ATTAAACGNA-CTATCCCNAACGCCCTCCAAATGAAACACTGANTATTTGGGTTGAGGGG 347
consensus_11406#7 AT-AAACGA--CTATCC-TAACGCC-TCCAAATGAA-CACTGAT-ATTTG--CTGAGGG- 313
consensus_11406#2 ATGATAATCACCGGTGGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCAT 546
consensus_11406#5 ------------------------------------------------------------
consensus_11406#1 ATGATAATCACCGATGGATACATTGTGCTATGCATGTATCGATCTATATTAATTAATCAT 650
consensus_11406#3 ATTTCCTAACGCCCCAAATAACACTGATNTTGGTGAGGGTTTNNGGGACT---------- 478
consensus_11406#6 ------------------------------------------------------------
consensus_11406#0 ATGATAATCACCGGTGGATAAATTTTGCTATGCATGTATCGTTCTATATTAATTAATCAT 651
consensus_11406#8 ------------------------------------------------------------
consensus_11406#4 TTTTNCTGGGGAACTNGTCTTG--------------- 369
consensus_11406#7 TTTTTTTGTAA-------------------------- 324
consensus_11406#2 TCTCGCATTTCAATAAATACTGCT------------- 570
consensus_11406#5 -------------------------------------
consensus_11406#1 TCTCGCATTCCAATGAATACTGCATATTG-------- 679
consensus_11406#3 -------------------------------------
consensus_11406#6 -------------------------------------
consensus_11406#0 TCTCGCATTTCAATAAATACTGCTTATTGTTGTAAAA 688
consensus_11406#8 -------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||