Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 1930 cluster # 1930       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1930#0 length = 1267 sequences # 2  

consensusID : consensus_1930#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1267
fasta sequence
                              [AGCCAANAATTTGGCACGAGGCCACTAGACATTGTTCTCACCAGAAAGGAACTTGAAACATTAACATGGATTCGAGCACCACGACAACTTCTTACAAAGGGCGTTTTTAGGGTTACTGAAAATCCTAGAGTATTCCTAGCACCTATGGATCTTTTAAAAACCAAAGCTTTAAGTTTATATTTACGACCAACACTACCAGACGATGAAGGAGAATATAAGTGTACACTTATCTTAAAAGATAGAATTCATGTTCATACTGTATCTTTAAATATTTCAATCCCTCCAATCATTATTAAATCTCCTGTTCCATACTTAAAAGTTGATGAAGGTTCATCACTCGAGCTAAATTGTCTAGCGACAGGAAATCCACCACCTCATGTAACATGGAAAGTCTTTTCTAATCCACTTGTAAAAGATGATAAAACTGATCAGAAATTATTATCAATTTATGATGCATTTTCTGGATTAGGAGTGCCTATTAATCATCATAACGGCACTCTGATTATTGGTAAGTTACACAGAAAAATGAATCAACGTTTTCTGTGTATAGCGGCTAATGGTGTTCAACCGGATGACCAGAGAGAAGTATTTCTATCAGTACGATTTTCACCAGAAGTCAAAATGACTAATCGTATCATCAAACAAGGTATTGGTATGAATACAGTGTTGACATGTCAAGTCAGTGCACATCCACCTGGATCCATACGATGGCTNTTT-ACCATCATTAT-CTATAGCAGCTAC-AGTTGTGATGTTATGACAAATTCAGAAAAGAAATATTGCTTACAGGAGCATAGACCACAATCATACAATAGTTTATCAGAAATCACATCAAAATTGGCTATTTTTAATTTAAAAGTAGGAGACTTTGGTGATTATGTTTGTTCAGTTAGCACAATTATGGGTGAATCATTTGGAGTGACGACTTTACAAAGGTTTAANACTGAACGTTTTGATACTGATTTAGCACANATAATGCATCANAAACAGATTGAAAGATTATCGGGATAACAGGTTACTCGTGACAGGATATCCAATTCTCATGAATATTATTANNTATAATACTTANNACATAATTAGATTGTCAGAAAAATAAGTTTATCANAGACCCATAGATACTCAAATACTGCTGCAATGCGACATTACTGNTCACTGATATAAACTGGCTATGGTGTCACATGCTGACTGTTATTAAACTTTTATATTTTAAAGATTCTTGGAGTGAGTATTATCAAAAAGGGTGATTTTGCTCCGCTGTTTGAAATTGGAA]

[+] EMBL CD080814             [AGCCAANAATTTGGCACGAGGCCACTAGACATTGTTCTCACCAGAAAGGAACTTGAAACATTAACATGGATTCGAGCACCACGACAACTTCTTACAAAGGGCGTTTTTAGGGTTACTGAAAATCCTAGAGTATTCCTAGCACCTATGGATCTTTTAAAAACCAAAGCTTTAAGTTTATATTTACGACCAACACTACCAGACGATGAAGGAGAATATAAGTGTACACTTATCTTAAAAGATAGAATTCATGTTCATACTGTATCTTTAAATATTTCAATCCCTCCAATCATTATTAAATCTCCTGTTCCATACTTAAAAGTTGATGAAGGTTCATCACTCGAGCTAAATTGTCTAGCGACAGGAAATCCACCACCTCATGTAACATGGAAAGTCTTTTCTAATCCACTTGTAAAAGATGATAAAACTGATCAGAAATTATTATCAATTTATGATGCATTTTCTGGATTAGGAGTGCCTATTAATCATCATAACGGCACTCTGATTATTGGTAAGTTACACAGAAAAATGAATCAACGTTTTCTGTGTATAGCGGCTAATGGTGTTCAACCGGATGACCAGAGAGAAGTATTTCTATCAGTACGATTTTCACCAGAAGTCAAAATGACTAATCGTATCATCAAACAAGGTATTGGTATGAATACAGTGTTGACATGTCAAGTCAGTGCACATCCACCTGGATCCATACGATGGCTNTTT ACCATCATTAT CTATAGCAGCTAC AGTTGTGATGTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD080179             [                                                                                                                                                                                                                                                                                                                                       GGTTCATCACTCGAGCTAAATTGTCTAGCGACAGGAAATCCACCACCTCATGTAACATGGAAAGTCTTTTCTAATCCACTTGTAAAAGATGATAAAACTGATCAGAAATTATTATCAATTTATGATGCATTTTCTGGATTAGGAGTGCCTATTAATCATCATAACGGCACTCTGATTATTGGTAAGTTACACAGAAAAATGAATCAACGTTTTCTGTGTATAGCGGCTAATGGTGTTCAACCGGATGACCAGAGAGAAGTATTTCTATCAGTACGATTTTCACCAGAAGTCAAAATGACTAATCGTATCATCAAACAAGGTATTGGTATGAATACAGTGTTGACATGTCAAGTCAGTGCACATCCACCTGGATCCATACGATGGCTTTTTAACCATCATTATCCTATAGCAGCTACAAGTTGTGATGTTATGACAAATTCAGAAAAGAAATATTGCTTACAGGAGCATAGACCACAATCATACAATAGTTTATCAGAAATCACATCAAAATTGGCTATTTTTAATTTAAAAGTAGGAGACTTTGGTGATTATGTTTGTTCAGTTAGCACAATTATGGGTGAATCATTTGGAGTGACGACTTTACAAAGGTTTAANACTGAACGTTTTGATACTGATTTAGCACANATAATGCATCANAAACAGATTGAAAGATTATCGGGATAACAGGTTACTCGTGACAGGATATCCAATTCTCATGAATATTATTANNTATAATACTTANNACATAATTAGATTGTCAGAAAAATAAGTTTATCANAGACCCATAGATACTCAAATACTGCTGCAATGCGACATTACTGNTCACTGATATAAACTGGCTATGGTGTCACATGCTGACTGTTATTAAACTTTTATATTTTAAAGATTCTTGGAGTGAGTATTATCAAAAAGGGTGATTTTGCTCCGCTGTTTGAAATTGGAA]


>consensus_1930#0 AGCCAANAATTTGGCACGAGGCCACTAGACATTGTTCTCACCAGAAAGGAACTTGAAACA TTAACATGGATTCGAGCACCACGACAACTTCTTACAAAGGGCGTTTTTAGGGTTACTGAA AATCCTAGAGTATTCCTAGCACCTATGGATCTTTTAAAAACCAAAGCTTTAAGTTTATAT TTACGACCAACACTACCAGACGATGAAGGAGAATATAAGTGTACACTTATCTTAAAAGAT AGAATTCATGTTCATACTGTATCTTTAAATATTTCAATCCCTCCAATCATTATTAAATCT CCTGTTCCATACTTAAAAGTTGATGAAGGTTCATCACTCGAGCTAAATTGTCTAGCGACA GGAAATCCACCACCTCATGTAACATGGAAAGTCTTTTCTAATCCACTTGTAAAAGATGAT AAAACTGATCAGAAATTATTATCAATTTATGATGCATTTTCTGGATTAGGAGTGCCTATT AATCATCATAACGGCACTCTGATTATTGGTAAGTTACACAGAAAAATGAATCAACGTTTT CTGTGTATAGCGGCTAATGGTGTTCAACCGGATGACCAGAGAGAAGTATTTCTATCAGTA CGATTTTCACCAGAAGTCAAAATGACTAATCGTATCATCAAACAAGGTATTGGTATGAAT ACAGTGTTGACATGTCAAGTCAGTGCACATCCACCTGGATCCATACGATGGCTNTTTACC ATCATTATCTATAGCAGCTACAGTTGTGATGTTATGACAAATTCAGAAAAGAAATATTGC TTACAGGAGCATAGACCACAATCATACAATAGTTTATCAGAAATCACATCAAAATTGGCT ATTTTTAATTTAAAAGTAGGAGACTTTGGTGATTATGTTTGTTCAGTTAGCACAATTATG GGTGAATCATTTGGAGTGACGACTTTACAAAGGTTTAANACTGAACGTTTTGATACTGAT TTAGCACANATAATGCATCANAAACAGATTGAAAGATTATCGGGATAACAGGTTACTCGT GACAGGATATCCAATTCTCATGAATATTATTANNTATAATACTTANNACATAATTAGATT GTCAGAAAAATAAGTTTATCANAGACCCATAGATACTCAAATACTGCTGCAATGCGACAT TACTGNTCACTGATATAAACTGGCTATGGTGTCACATGCTGACTGTTATTAAACTTTTAT ATTTTAAAGATTCTTGGAGTGAGTATTATCAAAAAGGGTGATTTTGCTCCGCTGTTTGAA ATTGGAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)