These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2981#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 128 fasta sequence [TTAGGGTTCTACTTAATGATAGGCAAGCTAAAAATATATTTCAGGAACAACTGGAAAAACAATTAGGCAGCCATGTAAGTTGTGCCCACCCCAAGTGCAGCGTGNGAATGACATCCAGAAAAGCTGTG] [+] EMBL CD068374 [TTAGGGTTCTACTTAATGATAGGCAAGCTAAAAATATATTTCAGGAACAACTGGAAAAACAATTAGGCAGCCATGTAAGTTGTGCCCACCCCAAGTGCAGCGTGNGAATGACATCCAGAAAAGCTGTG] consensusID : consensus_2981#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 104 fasta sequence [CAACTTACATGTCTTCCTAACTGTTTTTCTAGTTGTTCCTGAAACATATTCTTAGCTTGCCTATCATTAAGTAGAACCCTAAGAAGCTTTCTTGCCCAGTCTTT] [+] EMBL CD087464 [CAACTTACATGTCTTCCTAACTGTTTTTCTAGTTGTTCCTGAAACATATTCTTAGCTTGCCTATCATTAAGTAGAACCCTAAGAAGCTTTCTTGCCCAGTCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2981#0 TTAGGGTTCTACTTAATGATAGGCAAGCTAAAAATATATTTCAGGAACAACTGGAAAAAC 60 consensus_2981#1 ---------------------------CAACTTACATGTCTTCCTAACTGTTTTTCTAGT 33 * * * ** * * *** * * consensus_2981#0 AATTAGGCAGCCATGTAAGTTG--TGCCCACC-CCAAGTGCAGCGTGNGAATGACATCCA 117 consensus_2981#1 TGTTCCTGAAACATATTCTTAGCTTGCCTATCATTAAGTAGAACCCTAAGAAGCTTTCTT 93 ** * *** * * * **** * * **** * * * * ** consensus_2981#0 GAAAAGCTGTG 128 consensus_2981#1 GCCCAGTCTTT 104 * ** * |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||