Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 3342 cluster # 3342       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3342#0 length = 439 sequences # 2  
consensusID : consensus_3342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 439
fasta sequence 
                              [GCCTTATCCATCATATGATCGTGATTGGATGACTGCTCAAAATGAAGAGGATATGTTTAAAACAAATGAAGAGGAATTAAGAAGATTAGTTAGTGAAGCACAATCAAAAGAACAAAATCGTCAGCAAACAACAACAGAACAGCCAAATGTACAAAATGTATAGGGTCTTAATTGTTTTTATTCACTTATATTTATGAACTATCGATTACTGTTGTTTGTCCATTATGAAAAGATAAGGAAGTTCTTGGCTAGATTATGTTGATTTCTCCTGTAATTTATTTTTATCTCGACTATTTTTAATCCATACTTTATTCACAGGCAATTTATTACTGACTACCTTTTGATTTTTACAAACCTGAATTAACTGATTAACTTTAATTTGTTGTTTGCTTCTCTTCCTGCTAATCCATGTTATACTTACGACTTGTTTTTATTTTCC]

[+] EMBL CD200276             [GCCTTATCCATCATATGATCGTGATTGGATGACTGCTCAAAATGAAGAGGATATGTTTAAAACAAATGAAGAGGAATTAAGAAGATTAGTTAGTGAAGCACAATCAAAAGAACAAAATCGTCAGCAAACAACAACAGAACAGCCAAATGTACAAAATGTATAGGGTCTTAATTGTTTTTATTCACTTATATTTATGAACTATCGATTACTGTTGTTTGTCCATTATGAAAAGATAAGGAAGTTCTTGGCTAGATTATGTTGATTTCTCCTGTAATTTATTTTTATCTCGACTATTTTTAATCCATACTTTATTCACAGGCAATTTATTACTGACTACCTTTTGATTTTTACAAACCTGAATTAACTGATTAACTTTAATTTGTTGTTTGCTTCTCTTCCTGC                                     ]
[+] EMBL CD166998             [                                                                                                                                                                                                                                                                                                                                        ACTGACTACCTTTTGATTTTTACAAACCTGAATTAACTGATTAACTTTAATTTGTTGTTTGCTTCTCTTACTGCTAATCCATGTTATACTTACGACTTGTTTTTATTTTCC]




>consensus_3342#0
GCCTTATCCATCATATGATCGTGATTGGATGACTGCTCAAAATGAAGAGGATATGTTTAA
AACAAATGAAGAGGAATTAAGAAGATTAGTTAGTGAAGCACAATCAAAAGAACAAAATCG
TCAGCAAACAACAACAGAACAGCCAAATGTACAAAATGTATAGGGTCTTAATTGTTTTTA
TTCACTTATATTTATGAACTATCGATTACTGTTGTTTGTCCATTATGAAAAGATAAGGAA
GTTCTTGGCTAGATTATGTTGATTTCTCCTGTAATTTATTTTTATCTCGACTATTTTTAA
TCCATACTTTATTCACAGGCAATTTATTACTGACTACCTTTTGATTTTTACAAACCTGAA
TTAACTGATTAACTTTAATTTGTTGTTTGCTTCTCTTCCTGCTAATCCATGTTATACTTA
CGACTTGTTTTTATTTTCC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)