These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3876#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 138 fasta sequence [CTTTTGTATCATGATTATCGAGGTATCGTAGGTTATCATATCTCCCGAAACGGTTCTCCGATCTTATCATCAGTCCATTTTATCTAATCCGCAACCCAGCCCGCCGATGGCCNGGACAACGTTATCGAGAAACGTATC] [+] EMBL AA952801 [CTTTTGTATCATGATTATCGAGGTATCGTAGGTTATCATATCTCCCGAAACGGTTCTCCGATCTTATCATCAGTCCATTTTATCTAATCCGCAACCCAGCCCGCCGATGGCCNGGACAACGTTATCGAGAAACGTATC] consensusID : consensus_3876#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 129 fasta sequence [TTTGTATCATGATTATCGAGGTATTGTAGGTTATCCTATCTCCCGAAACGGTTCTCCGATCTTATCATCAGTCCCATTCTACAACCCGCAACCCAGCCCAGCCGAGGCCGGACAACGCCACGAAGTAAC] [+] EMBL AA917182 [TTTGTATCATGATTATCGAGGTATTGTAGGTTATCCTATCTCCCGAAACGGTTCTCCGATCTTATCATCAGTCCCATTCTACAACCCGCAACCCAGCCCAGCCGAGGCCGGACAACGCCACGAAGTAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3876#0 CTTTTGTATCATGATTATCGAGGTATCGTAGGTTATCATATCTCCCGAAACGGTTCTCCG 60 consensus_3876#1 --TTTGTATCATGATTATCGAGGTATTGTAGGTTATCCTATCTCCCGAAACGGTTCTCCG 58 ************************ ********** ********************** consensus_3876#0 ATCTTATCATCAGTCCATTTTATCTAATCCGCAACCCAGCCCGCCGATGGCCNGGACAAC 120 consensus_3876#1 ATCTTATCATCAGTCC-CATTCTACAACCCGCAACCCAGCCCAGCCGAGGCCGG-ACAAC 116 **************** ** * ** ************** * **** * ***** consensus_3876#0 GTTATCGAGAAACGTATC 138 consensus_3876#1 GCCACGAAGTAAC----- 129 * * ** *** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||