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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4340 cluster # 4340       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4340#0 length = 669 sequences # 3  

consensusID : consensus_4340#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 669
fasta sequence
                              [TAAAAGTGATCTATTACATAAACAAATCAATGAGTTAACTGAACGTGAAAGTTACAAAATTAAGTGGATTGAAAAGCGCAACGAATATGAAAGTGAAATCAAAGAATTAAAAAGAGCCAAAGAAAAGGCTACTCGGCAAAGTATCAAGTATGAAGAACAGATAACCGAATTAAAAACCAAGCTCAGTTCAAAACAAAAACAGATACACAATTTATTGATTGAACTAGAACAATCTAATTAAAGATTAAATGCAATTGAAACACAATTTGACGCATACAGATCACAAACTAGTCAGAATGAAGAGAATTATCAAAGGTTATCGCGTGAATTTGTGATTATGAAACAGTGTAAAGAGCAAGCAGAATTGAATGCAAAAAATTGTGAAAACAATCGATTACTATATGAGAAACGAATGAAAGAATTGGATGACAAGTTAACTGTTGTCCTGAGTTTTTTTTATTCTTTAAGTTTTTATTTGTAGGGGCTTTTTTGTTTGTTTAGATAAGATACGTGCACATACAATACATTGTTCAGTATCTGAGTTTTCGACATTGTTTCACCAGACGGTTCATGGAAATTTCGGACATTCTGATTTCATATACTCCCTTAAATTACGCCATTTCTACTCACAATAAAATATACCCATTTCCATCAATGGTTAAATTTTCA]

[-] EMBL CD132357             [TAAAAGTGATCTATTACATAAACAAATCAATGAGTTAACTGAACGTGAAAGTTACAAAATTAAGTGGATTGAAAAGCGCAACGAATATGAAAGTGAAATCAAAGAATTAAAAAGAGCCAAAGAAAAGGCTACTCGGCAAAGTATCAAGTATGAAGAACAGATAACCGAATTAAAAACCAAGCTCAGTTCAAAACAAAAACAGATACACAATTTATTGATTGAACTAGAACAATCTAATTAAAGATTAAATGCAATTGAAACACAATTTGACGCATACAGATCACAAACTAGTCAGAATGAAGAGAATTATCAAAGGTTATCGCGTGAATTTGTGATTATGAAA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD189739             [                                                                                                                                                                                                                                                                                              ACTACTCAGAATGAAGAGAATTATCAAAGGTTATCGCGTGAATTTGTGATTATGAAACAGTGTAAAGAGCAAGCAGAATTGAATGCAAAAAATTGTGAAAACAATCGATTACTATATGAGAAACGAATGAAAGAATTGGATGACAAGTTAACTGTTGTCCTGAGTTTTTTTTATTCTTTAAGTTTTTATTTGTAGGGGCTTTTTTGTTTGTTTAGATAAGATACGTGCACATACAATACATTGTTCAGTATCTGAGTTTTCGACATTGTTTCACCAGACGGTTCATGGAAATTTCGGACATTCTGATTTCATATACTCCCTTAAATTACGCCATTTCTACTCACAATAAAATATACCCATTTCCATCAATGGTTAAATTTTCA]
[+] EMBL CD189422             [                                                                                                                                                                                                                                                                                              ACTAGTCAGAATGAAGAGAATTATCAAAGGTTATCGCGTGAATTTGTGATTATGAAACAGTGTAAAGAGCAAGCAGAATTGAATGCAAAAAATTGTGAAAACAATCGATTACTATATGAGAAACGAATGAAAGAATTGGATGACAAGTTAACTGTTGTCCTGAGTTTTTTTTATTCTTTAAGTTTTTATTTGTAGGGGCTTTTTTGTTTGTTTAGATAAGATACGTGCACATACAATACATTGTTCAGTATCTGAGTTTTCGACATTGTTTCACCAGACGGTTCATGGAAATTTCGGACATTCTGATTTCATATACTCCCTTANATTACGCCATTTCTACTCACAATAAAATATACCCATTTCCATCAATGGTTAAATTTTCA]


>consensus_4340#0 TAAAAGTGATCTATTACATAAACAAATCAATGAGTTAACTGAACGTGAAAGTTACAAAAT TAAGTGGATTGAAAAGCGCAACGAATATGAAAGTGAAATCAAAGAATTAAAAAGAGCCAA AGAAAAGGCTACTCGGCAAAGTATCAAGTATGAAGAACAGATAACCGAATTAAAAACCAA GCTCAGTTCAAAACAAAAACAGATACACAATTTATTGATTGAACTAGAACAATCTAATTA AAGATTAAATGCAATTGAAACACAATTTGACGCATACAGATCACAAACTAGTCAGAATGA AGAGAATTATCAAAGGTTATCGCGTGAATTTGTGATTATGAAACAGTGTAAAGAGCAAGC AGAATTGAATGCAAAAAATTGTGAAAACAATCGATTACTATATGAGAAACGAATGAAAGA ATTGGATGACAAGTTAACTGTTGTCCTGAGTTTTTTTTATTCTTTAAGTTTTTATTTGTA GGGGCTTTTTTGTTTGTTTAGATAAGATACGTGCACATACAATACATTGTTCAGTATCTG AGTTTTCGACATTGTTTCACCAGACGGTTCATGGAAATTTCGGACATTCTGATTTCATAT ACTCCCTTAAATTACGCCATTTCTACTCACAATAAAATATACCCATTTCCATCAATGGTT AAATTTTCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)