cluster # 4790

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Schistosoma mansoni
cluster # 4790 cluster # 4790 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4790#0 length = 761 sequences # 3

consensusID : consensus_4790#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 761
fasta sequence

                              [CGGTCATCAATTTCACACTAGATAMCMGTGTCCTCAAATTGTAAARGGAAGTACAGGACGATTACGTAAACGTATGGCAAGTATGCGTGACATCGGAATGTGAGCGGTCTCCGAATTAACAGGAAAATGTCCTCAAGAATCAATTCMAAGTGCCCTTATTTTTGTATGTGGAATTACAATCCTCCCAGTAAGAATGCAGATWATAAGAAACACGGAATTCTAAACGAAGAAATCGAAACAAGAATCCTAATAATCAGTCTACAAATCCAGTATCVGAAAGAATTGTCAAAGAATGGTTAATTTGAAGCATGAACACGAATCTCCGTGAAAAAGGAACAGTGAACACGTTGGAGTTAATGCTTTACGTAAATCYTTAAATGGAAATAAAGATTCNAACTCCCAGAAAATCCMATCCAGTGAAACACAAAACGTCATGTTGGCGATGTGGTAAGTGTCATTCYGCCAATGTTTGCTATTTAAAAAACGAGTATGCTTTCAATGTGGTAAATATGGTCATGCTCAAGTATGTTGTAAAAGTAGGCCG-AGGTTTCTGACCGTGAGCATAAGTCCCGT-AACGAAATAAGATGCAGACTTCAAAATCAATACCGCATAACTCAAATGTTGTTCTGGCTACAAAAGTGAGCATTTCTTCYCTAAAAGGAAGTATGTACCATCYTTTTCGATGGCAACCGGTCAAAMTACAAGTCGATACTGGGTCTGACAWAACATTAATTTCCAGAGAACTTGGATAAAATTGGTCG]

[+] EMBL SM1247332            [CGGTCATCAATTTCACACTAGATAMCMGTGTCCTCAAATTGTAAARGGAAGTACAGGACGATTACGTAAACGTATGGCAAGTATGCGTGACATCGGAATGTGAGCGGTCTCCGAATTAACAGGAAAATGTCCTCAAGAATCAATTCMAAGTGCCCTTATTTTTGTATGTGGAATTACAATCCTCCCAGTAAGAATGCAGATWATAAGAAACACGGAATTCTAAACGAAGAAATCGAAACAAGAATCCTAATAATCAGTCTACAAATCCAGTATCVGAAAGAATTGTCAAAGAATGGTTAATTTGAAGCATGAACACGAATCTCCGTGAAAAAGGAACAGTGAACACGTTGGAGTTAATGCTTTACGTAAATCYTTAAATGGAAATAAAGATTCNAACTCCCAGAAAATCCMATCCAGTGAAACACAAAACGTCATGTTGGCGATGTGGTAAGTGTCATTCYGCCAATGTTTGCTATTTAAAAAACGAGTATGCTTTCAATGTGGTAAATATGGTCATGCTCAAGTATGTTGTAAAAGTAGGCCG AGGTTTCTGACCGTGAGCATAAGTCCCGT AACGAAATAAGATGCAGACTTCAAAATCAATACCGCATAACTCAAATGTTGTTCTGGCTACAAAAGTGAGCATTTCTTCYCTAAAAGGAAGTATGTACCATCYTTTTCGATGGCAACCGGTCAAAMTACAAGTCGATACTGGGTCTGACAWAACATTAATTTCCAGAGAACTTGGATAAAATTGGTCG]
[+] EMBL CD118195             [                                                                                                                                                                                                                                                                                                                   CATG ACACGAATCT CGT AAAAAGGAACAGTGAACACGTTGGAGTTAATGCTTTACGTAAATCTTTAAATGGAAATAAAGATTCGAACTCC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD154875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAAAAAGCGAGTATGCTTTCAATGTGGTAAATATGGTCATGCTCAAGTATGTTGTAAAAGTAGGCCGAAGGTTTCTGACCGTGAGCATAAGTTCCGTAAACGAAATAAGATGCAGACTTCAAAATCAATACCGCATAACTCAAATGT                                                                                                                                           ]




>consensus_4790#0
CGGTCATCAATTTCACACTAGATAMCMGTGTCCTCAAATTGTAAARGGAAGTACAGGACG
ATTACGTAAACGTATGGCAAGTATGCGTGACATCGGAATGTGAGCGGTCTCCGAATTAAC
AGGAAAATGTCCTCAAGAATCAATTCMAAGTGCCCTTATTTTTGTATGTGGAATTACAAT
CCTCCCAGTAAGAATGCAGATWATAAGAAACACGGAATTCTAAACGAAGAAATCGAAACA
AGAATCCTAATAATCAGTCTACAAATCCAGTATCVGAAAGAATTGTCAAAGAATGGTTAA
TTTGAAGCATGAACACGAATCTCCGTGAAAAAGGAACAGTGAACACGTTGGAGTTAATGC
TTTACGTAAATCYTTAAATGGAAATAAAGATTCNAACTCCCAGAAAATCCMATCCAGTGA
AACACAAAACGTCATGTTGGCGATGTGGTAAGTGTCATTCYGCCAATGTTTGCTATTTAA
AAAACGAGTATGCTTTCAATGTGGTAAATATGGTCATGCTCAAGTATGTTGTAAAAGTAG
GCCGAGGTTTCTGACCGTGAGCATAAGTCCCGTAACGAAATAAGATGCAGACTTCAAAAT
CAATACCGCATAACTCAAATGTTGTTCTGGCTACAAAAGTGAGCATTTCTTCYCTAAAAG
GAAGTATGTACCATCYTTTTCGATGGCAACCGGTCAAAMTACAAGTCGATACTGGGTCTG
ACAWAACATTAATTTCCAGAGAACTTGGATAAAATTGGTCG

clustalw multiple alignements is not computed in this case