cluster # 5114

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Schistosoma mansoni
cluster # 5114 cluster # 5114 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5114#0 length = 482 sequences # 3

consensusID : consensus_5114#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 482
fasta sequence

                              [TAGGTAGGTATTAAAGAAATAATTTAGAATATGATAACGCTTGTGCTCTCAATTTCGTCGGCTATTCGCAATGCAGTTGAAACAGTGCGTCCACGCAGAGTAGTTGGCCATGCTGACAATATTGATTCTATTACCACTGGTACACCTCATTCGGCTTCTGAAACTGGTGCGTATATTCACCCGTCTTTTTTTCTAAAAGCTCATTCTAAGATGCCTCAAAATCAAAACGATCAGATTCGCTTATTGACAACAATGCGTCCTTGGCTTCAGGAGGCCATTTCGTCTACTCGTATGTTAGAATCAAACTATACGGTTGATGGACCATTAACTTGGAAAGCATTTCATCAACTTGCTGGTCGGGGCTCCGATGAAACTTGTAAACCTCAACCGATTCCTCAGTTGCGCGTTAGCAGTTGCGACCTAGAAAACTTATTAATTTCTCCTTTCGCTCTTCGTGATTGGGATCGGTTATCATTATTTCC]

[+] EMBL CD128027             [TAGGTAGGTATTAAAGAAATAATTTAGAATATGATAACGCTTGTGCTCTCAATTTCGTCGGCTATTCGCAATGCAGTTGAAACAGTGCGTCCACGCAGAGTAGTTGGCCATGCTGACAATATTGATTCTATTACCACTGGTACACCTCATTCGGCTTCTGAAACTGGTGCGTATATTCACCCGTCTTTTTTTCTAAAAGCTCATTCTAAGATGCCTCAAAATCAAAACGATCAGATTCGCTTATTGACAACAATGCGTCCTTGGCTTCAGGAGGCCATTTCGTCTACTCGTATGTTAGAATCAAACTATACGGTTGATGGACCATTAACTTGGAAAGCATTTCATCAACTTGCTGGTCGGGGCTCCGATGAAACTTGTAAACCTCAACCGATTCCTCAGTTGCGCGTTAGCAGTTGCGACCTAGAAAACTTATTAATTTCTCCTTTCGCTCTTCGTGATTGGGATCGGTTATCATTATTTC ]
[-] EMBL CD117077             [                                                                         CAGTTGAAACAGTGCGTCCACGCAGAGTAGTTGGCCATGCTGACAATATTGATTCTATTACCACTGGTACACCTCATTCGGCTTCTGAAACTGGTGCGTATATTCACCCGTCTTTTTTTCTAAAAGCTCATTCTAAGATGCCTCAAAATCAAAACGATCAGATTCGCTTATTGACAACAATGCGTCCTTGGCTTCAGGAGGCCATTTCGTCTACTCGTATGTTAGAATCAAACTATACGGTTGATGGACCATTAACTTGGAAAGCATTTCATCAACTTGCTGGTCGGGGCTCCGATGAAACTTGTAAACCTCAACCGATTCCTCAGTTGCGCGTTAGCAGTTGCGACCTAGAAAACTTATTAATTTCTCCTTTCGCTCTTCGTGATTGGGATCGGTTATCATTATTTCC]
[-] EMBL CD139606             [                                                                                            ACGCAGAGTAGTTGGCCATGCTGACAATATTGATTCTATTACCACTGGTACACCTCATTCGGCTTCTGAAACTGGTGCGTATATTCACCCGTCTTTTNTTCTAAAAGCTCATTCTAAGATGCCTCAAAATCAAAACGATCAGATTCGCTTATTGACAACAATGCGTCCTTGGCTTCAGGAGGCCATTTCGTCTACTCGTATGTTAGAATCAAACTATACGGTTGATGG                                                                                                                                                                  ]




>consensus_5114#0
TAGGTAGGTATTAAAGAAATAATTTAGAATATGATAACGCTTGTGCTCTCAATTTCGTCG
GCTATTCGCAATGCAGTTGAAACAGTGCGTCCACGCAGAGTAGTTGGCCATGCTGACAAT
ATTGATTCTATTACCACTGGTACACCTCATTCGGCTTCTGAAACTGGTGCGTATATTCAC
CCGTCTTTTTTTCTAAAAGCTCATTCTAAGATGCCTCAAAATCAAAACGATCAGATTCGC
TTATTGACAACAATGCGTCCTTGGCTTCAGGAGGCCATTTCGTCTACTCGTATGTTAGAA
TCAAACTATACGGTTGATGGACCATTAACTTGGAAAGCATTTCATCAACTTGCTGGTCGG
GGCTCCGATGAAACTTGTAAACCTCAACCGATTCCTCAGTTGCGCGTTAGCAGTTGCGAC
CTAGAAAACTTATTAATTTCTCCTTTCGCTCTTCGTGATTGGGATCGGTTATCATTATTT
CC

clustalw multiple alignements is not computed in this case