Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5148 cluster # 5148       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5148#0 length = 814 sequences # 3  

consensusID : consensus_5148#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 814
fasta sequence
                              [AATGTAACTGACTTTATTACTTTCTTATCACTAAATCTACCATATGATAGAATGAAACTAAAAGGCACAGAAATGAAAGTTTTTGTCTTTGGTTATAAATGGAACGTGAAAAATAGTGATGAGATAAGACATTTTATATGTCTTCCCCAGTGTTAATCCTGAAATGAAATTATACGAATAACAATATCAGTCAATCAACAACAACTCAAAACCTGGTACGTATGTGTGATAGTCCTATTCATCAATCAATAACTGCACAGAAATCGTTTGTAGAATGATACAAAAAAAGATATACGTTAAAAGTGAGCATTATTAAATGTATCCTCCCAAAATATCTACACATACATAGTTGTATATAATGCATTGAAGTTAACGAAGAAATACTGTTACTACAATGGGTTATTTAGTACTTTTAAGGTTTGCACCATAACTAAATCAACCTTTTTATCTCCCGTGGGCTTTACGCCAATAGATGCAAATTGTTCTAGATCAGATTGTTCCAACCACGGAATATTCTCGGTGTTATCGACATAATCGATATCTACAAAATTATCACTTGTCATACTTGACTGACACAATTCATTCTCATTACTTTTAATCTGGTTCTCCCTTAAAGATGTTTAAGAATTTGTTGGTGTCGGTAAAAATATCCTACCATCTTGACTTTTGGACTCCCATTCTGCAAGTGTTGATGAAATATCAATTGATTTCGGTACGGTCACATAACGTATACGTTTACCAAATATCATTATTGTTTCAACTACAATAACTGCATTTAGTCTGTCAGAATCTGGTTTTCGTATTATAACACCAC]

[+] EMBL CD072931             [AATGTAACTGACTTTATTACTTTCTTATCACTAAATCTACCATATGATAGAATGAAACTAAAAGGCACAGAAATGAAAGTTTTTGTCTTTGGTTATAAATGGAACGTGAAAAATAGTGATGAGATAAGACATTTTATATGTCTTCCCCAGTGTTAATCCTGAAATGAAATTATACGAATAACAATATCAGTCAATCAACAACAACTCAAAACCTGGTACGTATGTGTGATAGTCCTATTCATCAATCAATAACTGCACAGAAATCGTTTGTAGAATGATACAAAAAAAGATATACGTTAAAAGTGAGCATTATTAAATGTATCCTCCCAAAATATCTACACATACATAGTTGTATATAATGCATTGAAGTTAACGAAGAAATACTGTTACTACAATGGGTTATTTAGTACTTTTAAGGTTTGCACCATAACTAAATCAACCTTTTTATCTCCCGTGGGCTTTACGCCAATAGATGCAAATTGTTCTAGATCA                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD078285             [                                                                                                                                                                                                                                                                                                                                                 ACACATACATAGTGNTATATAATGCATTGAAGTTAACGAAGAAATACTGTTACTACAATGGGTTATTTAGTACTTTTAAGGTNTGCACCATAACTAAATCAACCTTTTTATCTCCCGTGGGCTTTACGCCAATAGATGCAAATTGTTCTAGATCAGATTGTTCCAACCACGGAATATTCTCGGTGTTATCGACATAATCGATATCTACAAAATTATCACTTGTCATACTTGACTGACACAATTCATTCTCATTACTTTTAATCTGGTTCTCCCTTAAAGATGTTTAAGAATTTGTTGGTGTCGGTAAAAATATCCTACCATCTTGACTTTTGGACTCCCATTCTGCAAGTGTTGATGAAATATCAATTGATTTCGGTACGGTCACATAACGTATACGTTTACCAAATATCATTATTGTTTCAACTACAATAACTGCATTTAGTCTGTCAGAATCTGGTTTTCGTATTATAACACCAC]
[-] EMBL CD078371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tttCTACCATCTTGACTTTTGGACTCCCATTCTGCAAGTGTTGATGAAATATCAATTGATTTCGGTACGGTCACATAACGTATACGTTTACCAAATATCATTATTGTAGCAACTACAATAACTNCATTTAGTCTGTCAGAATCTGGTTT                 ]


>consensus_5148#0 AATGTAACTGACTTTATTACTTTCTTATCACTAAATCTACCATATGATAGAATGAAACTA AAAGGCACAGAAATGAAAGTTTTTGTCTTTGGTTATAAATGGAACGTGAAAAATAGTGAT GAGATAAGACATTTTATATGTCTTCCCCAGTGTTAATCCTGAAATGAAATTATACGAATA ACAATATCAGTCAATCAACAACAACTCAAAACCTGGTACGTATGTGTGATAGTCCTATTC ATCAATCAATAACTGCACAGAAATCGTTTGTAGAATGATACAAAAAAAGATATACGTTAA AAGTGAGCATTATTAAATGTATCCTCCCAAAATATCTACACATACATAGTTGTATATAAT GCATTGAAGTTAACGAAGAAATACTGTTACTACAATGGGTTATTTAGTACTTTTAAGGTT TGCACCATAACTAAATCAACCTTTTTATCTCCCGTGGGCTTTACGCCAATAGATGCAAAT TGTTCTAGATCAGATTGTTCCAACCACGGAATATTCTCGGTGTTATCGACATAATCGATA TCTACAAAATTATCACTTGTCATACTTGACTGACACAATTCATTCTCATTACTTTTAATC TGGTTCTCCCTTAAAGATGTTTAAGAATTTGTTGGTGTCGGTAAAAATATCCTACCATCT TGACTTTTGGACTCCCATTCTGCAAGTGTTGATGAAATATCAATTGATTTCGGTACGGTC ACATAACGTATACGTTTACCAAATATCATTATTGTTTCAACTACAATAACTGCATTTAGT CTGTCAGAATCTGGTTTTCGTATTATAACACCAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)