cluster # 5160

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Schistosoma mansoni
cluster # 5160 cluster # 5160 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5160#0 length = 563 sequences # 3

consensusID : consensus_5160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 563
fasta sequence

                              [ATACTTCTTCTAACAGAACTCACCAAGGCAAATGCAAACATCCAAAAAATAGTAGCCTTTGAAAATGCTTTCGATTGGTTACTGAAAATCATATATTCTGAAGGTCTGTGTGATGGTAGTGTGGTTGTAGAAGATTGTCTTCGTTTATTACTTCAATTGTTAGACGGTAATCCATCTAATCAAGTCTTGTTTGTAGAAGGGAATTTTATTCAGCGTCTTTCACTTTTATTTGACTTGTATTCTACTGATAGTACACAGCCACAACTTTGGTCTGCACAGAAAGTTGTCAATGCGGAGGTAGCTATGCAGGTTGTTCAAACCTTGGTAGCACCTTGTAATAAAGCTCAATTAACGCGAAACTGCCAGAATGTGGTTTATGATTGTGGTCTTCTAGAAAAATTGTGTAATATTGTCATGGTCAGTGGTGTTCCGGCAGACGTCCTGACAAAATCAATCTATGCTTTAGCAGACTCAATACGCGGATGCCCAAGAAATCAAGAATATTTAGCAAATTTAGTTACACCTTCAGAACCTCCTCAATCTGCTGTGAATGTGCTTCTCGT]

[+] EMBL CD169535             [ATACTTCTTCTAACAGAACTCACCAAGGCAAATGCAAACATCCAAAAAATAGTAGCCTTTGAAAATGCTTTCGATTGGTTACTGAAAATCATATATTCTGAAGGTCTGTGTGATGGTAGTGTGGTTGTAGAAGATTGTCTTCGTTTATTACTTCAATTGTTAGACGGTAATCCATCTAATCAAGTCTTGTTTGTAGAAGGGAATTTTATTCAGCGTCTTTCACTTTTATTTGACTTGTATTCTACTGATAGTACACAGCCACAACTTTGGTCTGCACAGAAAGTTGTCAATGCGGAGGTAGCTATGCAGGTTGTTCAAACCTTGGTAGCACCTTGTAATAAAGCTCAATTAACGCGAAACTGCCAGAATGTGGTTTATGATTGTGGTCTTCTAGAAAAATTGTGTAATATTGTCATGGTCAGTGGTGTTCCGGCAGACGTCCTGACAAAATCAATCTATGCTTTAGCAGACTCAATACGCGGATGCCCAAGAAATCAAGAATATTTAGCAAATTTAGT                                             ]
[-] EMBL CD090118             [                                                                                                                                              GTTTATTACTTCAATTGTTAGACGGTAATCCATCTAATCAAGTCTTGTTTGTAGAAGGGAATTTTATTCAGCGTCTTTCACTTTTATTTGACTTGTATTCTACTGATAGTACACAGCCACAACTTTGGTCTGCACAGAAAGTTGTCAATGCGGAGGTAGCTATGCAGGTTGTTCAAACCTTGGTAGCACCTTGTAATAAAGCTCAATTAACGCGAAACTGCCAGAATGTGGTTTATGATTGTGGTCTTCTAGAAAAATTGTGTAATATTGTCATGGTCAGTGGTGTTCCGGCAGACGTCCTGACAAAATCAATCTATGCTTTAGCAGACTCAATACGCGGATGCCCAAGAAATCAAGAATATTTAGCAAATTTAGTTACACCTTCAGAACCTCCTCAATCTGCTGTGAA            ]
[+] EMBL CD154424             [                                                                                                                                                                                                                                                                                                                                       GCACCTTGTAATAAAGCT AATTAACGCGAAACTGCCAGAATGTGGTTTATGATTGTGGTCTTCTAGAAAAATTGTGTAATATTGTCATGGTCAGTGGTGTTCCGGCAGACGTCCTGACAAAATCAATCTATGCTTTAGCAGACTCAATACGCGGATGCCCAAGAAATCAAGAATATTTAGCANATTTAGTTACACCTTCAGAACCTCCTCAATCTGCTGTGAATGTGCTTCTCGT]




>consensus_5160#0
ATACTTCTTCTAACAGAACTCACCAAGGCAAATGCAAACATCCAAAAAATAGTAGCCTTT
GAAAATGCTTTCGATTGGTTACTGAAAATCATATATTCTGAAGGTCTGTGTGATGGTAGT
GTGGTTGTAGAAGATTGTCTTCGTTTATTACTTCAATTGTTAGACGGTAATCCATCTAAT
CAAGTCTTGTTTGTAGAAGGGAATTTTATTCAGCGTCTTTCACTTTTATTTGACTTGTAT
TCTACTGATAGTACACAGCCACAACTTTGGTCTGCACAGAAAGTTGTCAATGCGGAGGTA
GCTATGCAGGTTGTTCAAACCTTGGTAGCACCTTGTAATAAAGCTCAATTAACGCGAAAC
TGCCAGAATGTGGTTTATGATTGTGGTCTTCTAGAAAAATTGTGTAATATTGTCATGGTC
AGTGGTGTTCCGGCAGACGTCCTGACAAAATCAATCTATGCTTTAGCAGACTCAATACGC
GGATGCCCAAGAAATCAAGAATATTTAGCAAATTTAGTTACACCTTCAGAACCTCCTCAA
TCTGCTGTGAATGTGCTTCTCGT

clustalw multiple alignements is not computed in this case