cluster # 5437

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Schistosoma mansoni
cluster # 5437 cluster # 5437 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5437#0 length = 431 sequences # 3

consensusID : consensus_5437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 431
fasta sequence

                              [AAGCCTCTTCAAACACAGCGTGCTA-TGCCATTACTTCACCACCGCTTTTC-ATGGAGCTGCCAATTTTACGGCTCACTCTAGAAAACTTCGCTAAATCCCAGCGTGGAACTTTCACAACACAGTAA-TCTAAACTAGGTTCGAAACATGCTGTGGTGAGACCACCAGTTACACTATTTGTAAGTTCCGGGAGACTCTTACCCAAGCTAAGTTTGGCAGCTATATAGGCTATCGGATAACCAGTGGCTTTACTAGCGAGTGCAGAGCTTCTAGACAGTCGGGCATTTACTTCAATGATGTACATAGTTCAAAGAATGTGGGTCTAACGCAAACTGGATATCGCATTCACCAACAATCCGAAAATGACGAGCGACTTTACTTGCAACTGACCGTAACATATAATACTCAACATTCGAGAGTGTTTGACTTGGTGA]

[+] EMBL CD062444             [AAGCCTCTTCAAACACAGCGTGCTA TGCCATTACTTCACCACCGCTTTTC ATGGAGCTGCCAATTTTACGGCTCACTCTAGAAAACTTCGCTAAATCCCAGCGTGGAACTTTCACAACACAGTAA TCTAAACTAGGTTCGAAACATGCTGTGGTGAGACCACCAGTTACACTATTTGTAAGTTCCGGGAGACTCTTACCCAAGCTAAGTTTGGCAGCTATATAGGCTATCGGATAACCAGTGGCTTTACTAGCGAGTGCAGAGCTTCTAGACAGTCGGGCATTTACTTCAATGATGTACATAGTTCAAAGAATGTGGGTCTAACGCAAACTGGATATCGCATTCACCAACAATCCGAAAATGACGAGCGACTTTACTTGCAACTGACCGTAACATATAATACTCAACATTCGAGAGTGTTTGACTTGGTGA]
[-] EMBL CD157973             [         CAAA ACAGCGTGCTATTGCCATTACTTCACCAACGCTTTTCAATGGAGCTGCCAATTTTACGGCTCACTCTAGAAAACTTCGCTAAATCCCAGCGTGGAACTTTCACAACACAGTAT TCTAAACTAGGTTCGAAACATGCTGTGGTGAGACCACCAGTTACACTATTTGTAAGTTCCGGGAGACTCTTACCCAAGCTAAGTT                                                                                                                                                                                                                             ]
[-] EMBL CD157981             [                                                          CTGCCAATTTTACGGCTCACTCTAGAAAACTTCGCTAAATCCCAGCGTGGAACTTCCACAACACAGTAATTCTAAACTAGGTTCGAAACATGCTGTGGTGAGACCACCAGTTACACTATTTGTAAGTTCCGGGAGACTCTTACCCAAGCTAAGTT                                                                                                                                                                                                                             ]




>consensus_5437#0
AAGCCTCTTCAAACACAGCGTGCTATGCCATTACTTCACCACCGCTTTTCATGGAGCTGC
CAATTTTACGGCTCACTCTAGAAAACTTCGCTAAATCCCAGCGTGGAACTTTCACAACAC
AGTAATCTAAACTAGGTTCGAAACATGCTGTGGTGAGACCACCAGTTACACTATTTGTAA
GTTCCGGGAGACTCTTACCCAAGCTAAGTTTGGCAGCTATATAGGCTATCGGATAACCAG
TGGCTTTACTAGCGAGTGCAGAGCTTCTAGACAGTCGGGCATTTACTTCAATGATGTACA
TAGTTCAAAGAATGTGGGTCTAACGCAAACTGGATATCGCATTCACCAACAATCCGAAAA
TGACGAGCGACTTTACTTGCAACTGACCGTAACATATAATACTCAACATTCGAGAGTGTT
TGACTTGGTGA

clustalw multiple alignements is not computed in this case