cluster # 5556

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Schistosoma mansoni
cluster # 5556 cluster # 5556 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5556#0 length = 334 sequences # 3

consensusID : consensus_5556#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 334
fasta sequence

                              [GTTAATACAGTTATCTTCGCCTAGAATACCAAGTTAGA-GGAAATTATTCCATTTTTAAATACTTCGAAACATGGAACAAAATCGACTAGACATTCACTGAAAACCAAGTACGGAATCTTATACCTATTTGTAGCTAATAATCGACCGTGAGTTGAAGAAACGATCTTTAAGTCTTACGTTGAGTTTAATGATTTCAGGTCACTTAGTTAGGATCTAGTAGTCCGCAGTTTTATAATCTCCCAATAGCATCTGAATACTATTTCGTTATTCACATGAAAT--AATACAACGTAATATTCCAACTGTACATTTTTTATGATTA-TTTACAAAACGCTTA]

[+] EMBL CD111858             [GTTAATACAGTTATCTTCGCCTAGAATACCAAGTTAGA GGAAATTATTCCATTTTTAAATACTTCGAAGCATGGAACAAAATCGACTAGACATTCACTGAAAACCAAGTACGGAATCTTATACCTATTTGTAGCTAATAATCGACCGTGAGTTGAAGAAACGATCTTTAAGTCTTACGTTGAGTTTAATGATTTCAGGTCACTTAGTTAGGATCTAGTAGTCCGCAGTTTTATAATCTCCCAATAGCATCTGAATACTATTTCGTTATTCACATGAAATAAAATAC ACGT ATATTCCAACTGTACATTTTTTATGATTATTTTAC ANACGCTT ]
[-] EMBL CD110755             [  TAATACAGCTATCTTCGCCTAGAATACCAAGTTAGA GGAAACTATTCCA TTTTAAATACTTCGAAACATGGAACAAAATCGACTAGACATTCACTGAAAACCAAGTACGGAATCTTATACCTATTTGTAGCTAATAATCGACCGTGAGTTGAAGAAACGATCTTTAAGTCTTACGTTGAGTTTAATGATTTCAGGTCACTTAGTTAGGATCTAGTAGTCCGCAGTTTTATAATCTCCCAATAGCATCTGAATACTATTTCGTTATTCACATAAAAT  AATACAACGTAATATTCCAACTGTACATTTTTTATGATTA TTTACAAAACGCTTA]
[-] EMBL CD111800             [                            aCAAG TAGANGGAAATTATTCCATTTTTAAATACTTCGGAACATGGAACAAAATCGACTAGACATTCACTGAAAACCAAGTACGGAATCTTATACCTATTTGTAGCTAATAATCGACCGTGAGTTGAAGAAACGATCTTTAAGTCTTACGTTGAGTTTAATGATTTCAGGTCACTTAGTTAGGATCTAGTAGTCCGCAGTTTTATAATCTCCCAATAGCATCTGAATACTATTTCGTTATTCACATGAAAT  AATACAACGTAATATTCCAACTGTACATTTTTTATGATTA TTTACAAAACGCTTA]




>consensus_5556#0
GTTAATACAGTTATCTTCGCCTAGAATACCAAGTTAGAGGAAATTATTCCATTTTTAAAT
ACTTCGAAACATGGAACAAAATCGACTAGACATTCACTGAAAACCAAGTACGGAATCTTA
TACCTATTTGTAGCTAATAATCGACCGTGAGTTGAAGAAACGATCTTTAAGTCTTACGTT
GAGTTTAATGATTTCAGGTCACTTAGTTAGGATCTAGTAGTCCGCAGTTTTATAATCTCC
CAATAGCATCTGAATACTATTTCGTTATTCACATGAAATAATACAACGTAATATTCCAAC
TGTACATTTTTTATGATTATTTACAAAACGCTTA

clustalw multiple alignements is not computed in this case