cluster # 5561

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Schistosoma mansoni
cluster # 5561 cluster # 5561 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5561#0 length = 448 sequences # 3

consensusID : consensus_5561#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 448
fasta sequence

                              [TGAGTTCGGCTGCGTTTCAATCAATCTTAAGTCTCCTTTTTATCATACACACAATACCAAAGATGACCCACCCTACTGGCGAGGTGCTATATGGATAAATATAAATTATTTGGCCGTACAGTCACTACGTTATTACGCCCACCATTCGCGTACACCTGTACCTGTCGCTGCAGAAGCTAAACGGTCAGCTGAACAACTGACGCAAAATTTAGCACGTACCGTATTAGGTG-AACTTG-AACGAACAGGTCATTTATGGG--AACAGTATAATGATCAGACTGGGAATGGTCAACGTGGTCATCCGTTTTCAGGATGGACAAGTTTAATTAGTTTAATAATTAGTGATAGTTCTTAACTTTTTTTGTTTTTATCATTTATGT-ACCGTG-ACTTATTGTTGTATATCCTCTNCNCTNTCCCTACGGTATTTCGGTCTCTATGTTGTNATATTTCG]

[-] EMBL CD165117             [TGAGTTCGGCTGCGTTTCAATCAATCTTAAGTCTCCTTTTTATCATACACACAATACCAAAGATGACCCACCCTACTGGCGAGGTGCTATATGGATAAATATAAATTATTTGGCCGTACAGTCACTACGTTATTACGCCCACCATTCGCGTACACCTGTACCTGTCGCTGCAGAAGCTAAACGGTCAGCTGAACAACTGACGCAAAGTTTAGCACGTACCGTATTAGGTG AACTTG TACGAACAGGTCATTTATGGG  AACAGTATAATGATCAGACTGGGAATGGTCAACGTGGTCATCCGTTTTCAGGATGGACAAGTTTAATTA                                                                                                                            ]
[+] EMBL CD118556             [                                                                      CCCTACTGGCGAGGTGCTATATGGATAAATATAAATTATTTGGCCGTACAGTCACTACGTTATTACGCCCACCATTCGCGTACACCTGTACCTGTCGCTGCAGAAGCTAAACGGTTAGCTGAACAACTGACGCAAAATTTAGCACGTACCGTATTAGGTG AACTTG AACGAACAGGTCATTTATGGG  AACAGTATAATGATCAGACTGGGAATGGTCAACGTGGTCATCCGTTTTCAGGATGGACAAGTTTAATTAGTTTAATAATTAGTGATAGTTCTTAACTTTTTTTGTTTTTATCATTTATGT ACCGTG ACTTATTGTTGTATATCCTCT                                            ]
[+] EMBL SM7061               [                                                                                                                                                                                                           AAAATTTAGNACGTACCGTATTAGGTGNAACTNGNAACGAACAGGTCATTTATGGGGTAACAGTATAATGATCAGACTGGGAATGGTCAACGTGGTCATCCGTNTTCAGGATGGACAAGTTTAATTAGTTTACTAATTAGTGATAGTTCTNAACTTTTTTTGTTTTTATCANTTATGTNACCGTGNACTTATTGTTGCATATCCCCTNCNCTNTCCCTACGGTATTTCGGTCTCTATGTTGTNATATTTCG]




>consensus_5561#0
TGAGTTCGGCTGCGTTTCAATCAATCTTAAGTCTCCTTTTTATCATACACACAATACCAA
AGATGACCCACCCTACTGGCGAGGTGCTATATGGATAAATATAAATTATTTGGCCGTACA
GTCACTACGTTATTACGCCCACCATTCGCGTACACCTGTACCTGTCGCTGCAGAAGCTAA
ACGGTCAGCTGAACAACTGACGCAAAATTTAGCACGTACCGTATTAGGTGAACTTGAACG
AACAGGTCATTTATGGGAACAGTATAATGATCAGACTGGGAATGGTCAACGTGGTCATCC
GTTTTCAGGATGGACAAGTTTAATTAGTTTAATAATTAGTGATAGTTCTTAACTTTTTTT
GTTTTTATCATTTATGTACCGTGACTTATTGTTGTATATCCTCTNCNCTNTCCCTACGGT
ATTTCGGTCTCTATGTTGTNATATTTCG

clustalw multiple alignements is not computed in this case