Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5667 cluster # 5667       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5667#0 length = 542 sequences # 3  

consensusID : consensus_5667#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 542
fasta sequence
                              [ACAGACTTTTTTCAGAAACTTTTTCCATCTTGAGCAAATAATACAGCAGAGGAGAAAAATTTAAATCTACCAGTAATACTGAAGTCATTAAGAGATATATGTATATATATCTCCATGCAACCAGCCAGAAATGATATCACCAGAAAAGAAGGAAAAAAGGACTGTGAGAAAACCACTAGATTACAATGAAAGTATTTAAACAAATGAAACAATAGAATTTGTCACATAGATAATGACTTTGATTTTTACCACACAGTGTCATATTTCAATAAGAAAGATAATGAAAGGAATCACAGTTTTTTTTCGGTTGTCAGCGTAACAAGTTGGCTACAAGACAAACAGAATAAGGGTAAAGGTTAGTAAAGAACACAAATCAAACGTTATGATGGTTGAGTGTCATCTTACAACCAACCGCTGTCAATTAAAGTACAGATAAGTAAAGAGATAGTAAGGGACAATTTACATTGATCACCCTGAACAAGACAAGTCTAAGAAAAAAATTATTGTTGTTTTCTCAACATCCCGAATTACTTTCCAGTTTA]

[+] EMBL CD077099             [ACAGACTTTTTTCAGAAACTTTTTCCATCTTGAGCAAATAATACAGCAGAGGAGAAAAATTTAAATCTACCAGTAATACTGAAGTCATTAAGAGATATATGTATATATATCTCCATGCAACCAGCCAGAAATGATATCACCAGAAAAGAAGGAAAAAAGGACTGTGAGAAAACCACTAGATTACAATGAAAGTATTTAAACAAATGAAACAATAGAATTTGTCACATAGATAATGACTTTGATTTTTACCACACAGTGTCATATTTCAATAAGAAAGATAATGAAAGGAATCACAGTTTTTTTTCGGTTGTCAGCGTAACAAGTTGGCTACAAGACAAACAGAATAAGGGTAAAGGTTAGTAAAGAACACAAATCAAACGTTATGATGGTTGAGTGTCATCTTACAACCAACCGCTGTCAATTAAAGTACAGATAAGTAAAGAGATAGTAAGGGACAATTTACATTGATCACCCTGAACAAGACAAGTCTAAGAAAAAAATTATTGTTGTTTTCTCAACATCCCGAATTACTTTCCAGTTTA]
[+] EMBL CD201512             [                                          ACAGCAGAGGAGAAAAATTTAAATCTGCCAGTAATACTGAAGTCATTAAGAGATATATGTATATATATCTCCATGCAACCAGCCAaat                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD146818             [                                                                                                                                      TATCACCAGAAAAGAAGGAAAAAAGGACTGTGAGAAAACCACTAGATTACAATGAAAGTATTTAAACAAATGAAACAATAGAATTTGTCACATAGATAATGACTTTGATTTTTACCACACAGTGTCATATTTCAATAAGAAAGATAATGAAAGGAATCACAGTTTTTTTTCGGTTGTCAGCGTAACAAGTTGGCTACAAGACAAACAGAATAAGGGTAAAGGTTAGTAAAGAACACAAATCAAACGTTATGATGGTTGAGTGTCATCTTACAACCAACCGCTGTCAATTAAAGTACAGATAAGTAAAGAGATAGTAAGGGACAATTTACATTGATCACCCTGAACAAGACAAGTCTAAGAAAAAAAT                                         ]


>consensus_5667#0 ACAGACTTTTTTCAGAAACTTTTTCCATCTTGAGCAAATAATACAGCAGAGGAGAAAAAT TTAAATCTACCAGTAATACTGAAGTCATTAAGAGATATATGTATATATATCTCCATGCAA CCAGCCAGAAATGATATCACCAGAAAAGAAGGAAAAAAGGACTGTGAGAAAACCACTAGA TTACAATGAAAGTATTTAAACAAATGAAACAATAGAATTTGTCACATAGATAATGACTTT GATTTTTACCACACAGTGTCATATTTCAATAAGAAAGATAATGAAAGGAATCACAGTTTT TTTTCGGTTGTCAGCGTAACAAGTTGGCTACAAGACAAACAGAATAAGGGTAAAGGTTAG TAAAGAACACAAATCAAACGTTATGATGGTTGAGTGTCATCTTACAACCAACCGCTGTCA ATTAAAGTACAGATAAGTAAAGAGATAGTAAGGGACAATTTACATTGATCACCCTGAACA AGACAAGTCTAAGAAAAAAATTATTGTTGTTTTCTCAACATCCCGAATTACTTTCCAGTT TA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)