cluster # 5928

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Schistosoma mansoni
cluster # 5928 cluster # 5928 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5928#0 length = 492 sequences # 3

consensusID : consensus_5928#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 492
fasta sequence

                              [AAGCGAGATACTTCTTCACGGCGCCCAACAACCCCCAAAAATCCTTTTAGTACTGATCCTAGAGTATCACCGACATCTTGATCTTCATTAGTATAATGTACACAACGTATACAAAATGGTGGTTCAAGATTAGCGAACCCCAAAAGAGGTGGCCTAGAACAACTGGTGACAAACTTCAAAAATAAACTACGTTCTCTATCGTCGAAATCACGTCTTAAAATATCCCATAACCATCGAATTACGCGATGATTACTATGAAATCCACCTGAATAACGTGTATGTTGTTTTAGATCATCAATATCCATTGAACTACTGTCACCTGAGATAAGTGTTTGTAATTCTGATGGAGAAAACATAGCCAACCAATCAGGACTTAGTATAGAGTAAAATCCCCGTATAAAAGAAGCAGTCTGTGCTCTAATTTGTTTATACATTCGAAAGTGAGCAACACTATGAACGTAACTTATTTTGACATCATTCGCCACAGAAATT]

[+] EMBL CD127335             [AAGCGAGATACTTCTTCACGGCGCCCAACAACCCCCAAAAATCCTTTTAGTACTGATCCTAGAGTATCACCGACATCTTGATCTTCATTAGTATAATGTACACAACGTATACAAAATGGTGGTTCAAGATTAGCGAACCCCAAAAGAGGTGGCCTAGAACAACTGGTGACAAACTTCAAAAATAAACTACGTTCTCTATCGTCGAAATCACGTCTTAAAATATCCCATAACCATCGAATTACGCGATGATTACTATGAAATCCACCTGAATAACGTGTATGTTGTTTTAGATCATCAATATCCATTGAACTACTGTCACCTGAGATAAGTGTTTGTAATTCTGATGGAGAAACCATAGCCAACCAATCAGGACTTAGTATAGAGTAAAATCCCCGTATAAAAGAAGCAGTCTGTGCTCTAATTTGTTTATACATTCGAAAGTGAGC                                              ]
[-] EMBL CD189625             [                                                                 ATCACCGACATCTTGATCTTCATTAGTATAATGTACACAACGTATACAAGATGGTGGTTCAAGATTAGCGAACCNCAAAAGAGGTGGCCTAGAACAACTGGTGACAAACTTCAAAAATAAATTACGTTCTCTATCGTCGAAATCACGTCTTAAAATATCCCATAACCATCGAATTACGCGATGATTACTATGAAATCCACCTGAATAACGTGTATGTTGTTTTAGATCATCAATATCCATTGAACTACTGTCACCTGAGATAAGTGTTTGTAATTCTGATGGAGAAAACATAGCCAACCAATCAGGACTTAGTATAGAGTAAAATCCCCGTATAAAAGAAGCAGTCTGTGCTCTAATTTGTTTGTACATTCGAAAGTGAGCAACACTATGAACGTAACTTATTTTGACATCATTCGCCACAGAAATT]
[-] EMBL CD155623             [                                                                                                                                                         tgaaAACAACT  T AC   CTTCAAAAATAAACTACGTTCTCTATCGTCGAAATCACGTCTTAAAATATCCCATAACCATCGAATTACGCGATGATTACTATGAAATCCACCTGAATAACGTGTATGTTGTTTTAGATCATCAATATCCATTGAACTACTGTCACCTGAGATAAGTGTTTGTAATTCTGATGGAGAAAACATAGCCAACCAATCAGGACTTAGTATAGAGTAAAATCCCCGTATAAAAGAAGCAGTCTGTGCTCTAATTTGTTTATACATTCGAAAGTGAGCAAC                                           ]




>consensus_5928#0
AAGCGAGATACTTCTTCACGGCGCCCAACAACCCCCAAAAATCCTTTTAGTACTGATCCT
AGAGTATCACCGACATCTTGATCTTCATTAGTATAATGTACACAACGTATACAAAATGGT
GGTTCAAGATTAGCGAACCCCAAAAGAGGTGGCCTAGAACAACTGGTGACAAACTTCAAA
AATAAACTACGTTCTCTATCGTCGAAATCACGTCTTAAAATATCCCATAACCATCGAATT
ACGCGATGATTACTATGAAATCCACCTGAATAACGTGTATGTTGTTTTAGATCATCAATA
TCCATTGAACTACTGTCACCTGAGATAAGTGTTTGTAATTCTGATGGAGAAAACATAGCC
AACCAATCAGGACTTAGTATAGAGTAAAATCCCCGTATAAAAGAAGCAGTCTGTGCTCTA
ATTTGTTTATACATTCGAAAGTGAGCAACACTATGAACGTAACTTATTTTGACATCATTC
GCCACAGAAATT

clustalw multiple alignements is not computed in this case