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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6077 cluster # 6077       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6077#0 length = 1129 sequences # 4  

consensusID : consensus_6077#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1129
fasta sequence
                              [AACGTAAACGTAAAGCTCCAAAACAACGAAAACGTCAAAATTTCATACATGATTATCAATCAGATCAGGGCTGTTTAGATCAGTGCAGTTCATATTCAGATAGTCAGAAAACAAAACATAATAACCACCAACCATTGGACTCATTTATTGCAAAATGTGCTGATGTAACTGATCCAAATGTAGACAGTAAGCGTGTCGAGAACGTGGATGGGAATCTTGGCGTAAATGAGCATCAACATGAAGATAATAATAGCAACGATGATGTAAATAAGAATGAGGTGAATTTGTTCAATTCGAATGAATGCGAGCTTTCAAGCGAAACAATAAACCAAGGTTCTTGTGATGAAGTAGCATCATCGGACGGGAATTGTGCAGACGTTGAAGGTAGTGATCGATATGACAGTGTTGCATCACTGCAAGTCATTCCAAATGGCTGTGATGAAAATGTAAAACAGTCAGAGATAAATCATATCAACACAGCATTGGAAAAGTTATCTTTGGACACAGTTGTATCGTCACAGTTGTTTTCATGTGATTCAGATGAATTAAATCAAGCTATTCATTATGCACGAGTTCCACTTGGTCAGAATAAAAGTAACAATTCAACAGAAGAAGGAGTTACTTCTATTTATGAATGTCTTTCAAAATATACTTCTGCTGAATTATTAACAGGATCTAATCGTTTAATTTGTGATGTATGCACAAAACAAAAATCATTAGATGAGTTGGATAGTAATTTGGATAGTAAATCAATGGATAAGCAGACGCCTAACAACAACAAGCCAGACATTTTACAAGATACTATCAAACGTGATTTAATCTATAAACCTCCACCGATTCTGACAATACATTTAAAGCGATTTCAACAGGTCGGTTTTCAATTACGAAAATCTCAGAAACGTATTAACTTCCCAATCTACTTGGATATTACTCCTTTCTGTTCTGTTCCCGCTGTGGTAAATAGTTTTTTGCCATCTTTCTTTGATAATTATTATTATAACCTCTGTTCGTTTGGCATACAGAAGTACCCATTGTGTACATTTATATTTGTCAATACTGACCATATGTAGCCTCTGCCAGAGAAGTCCTACTTACTGCCTTCTCGTGGCATTACTGGTGNTTACGANAT]

[+] EMBL CD115112             [AACGTAAACGTAAAGCTCCAAAACAACGAAAACGTCAAAATTTCATACATGATTATCAATCAGATCAGGGCTGTTTAGATCAGTGCAGTTCATATTCAGATAGTCAGAAAACAAAACATAATAACCACCAACCATTGGACTCATTTATTGCAAAATGTGCTGATGTAACTGATCCAAATGTAGACAGTAAGCGTGTCGAGAACGTGGATGGGAATCTTGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL SMRAP122             [                                                                                             ATTCAGATAGTCAGAAAACAAAACATAATAACCACCAACCATTGGACTCATTTATTNCNAAATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD153314             [                                                                                                                                                                              CAAATGTACACAGTAAGCGTGTCGAGAACGTGGATGGGAATCTTGGCGTAAATGAGCATCAACATGAAGATAATAATAGCAACGATGATGTAAATAAGAATGAGGTGAATTTGTTCAATTCGAATGAATGCGAGCTTTCAAGCGAAACAATAAACCAAGGTTCTTGTGATGAAGTAGCATCATCGGACGGGAATTGTGCAGACGTTGAAGGTAGTGATCGATATGACAGTGTTGCATCACTGCAAGTCATTCCAAATGGCTGTGATGAAAATGTAAAACAGTCAGAGATAAATCATATCAACACAGCATTGGAAAAGTTATCTTTGGACACAGTTGTATCGTCACAGTTGTTTTCATGTGATTCAGATGAATTAAATCAAGCTATTCATTATGCACGAGTTCCACTTGGTCAGAATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD170480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGAATTAAATCAAGCTATTCATTATGCACGAGTTCCACTTGGTCAGAATAAAAGTAACAATTCAACAGAAGAAGGAGTTACTTCTATTTATGAATGTCTTTCAAAATATACTTCTGCTGAATTATTAACAGGATCTAATCGTTTAATTTGTGATGTATGCACAAAACAAAAATCATTAGATGAGTTGGATAGTAATTTGGATAGTAAATCAATGGATAAGCAGACGCCTAACAACAACAAGCCAGACATTTTACAAGATACTATCAAACGTGATTTAATCTATAAACCTCCACCGATTCTGACAATACATTTAAAGCGATTTCAACAGGTCGGTTTTCAATTACGAAAATCTCAGAAACGTATTAACTTCCCAATCTACTTGGATATTACTCCTTTCTGTTCTGTTCCCGCTGTGGTAAATAGTTTTTTGCCATCTTTCTTTGATAATTATTATTATAACCTCTGTTCGTTTGGCATACAGAAGTACCCATTGTGTACATTTATATTTGTCAATACTGACCATATGTAGCCTCTGCCAGAGAAGTCCTACTTACTGCCTTCTCGTGGCATTACTGGTGNTTACGANAT]


>consensus_6077#0 AACGTAAACGTAAAGCTCCAAAACAACGAAAACGTCAAAATTTCATACATGATTATCAAT CAGATCAGGGCTGTTTAGATCAGTGCAGTTCATATTCAGATAGTCAGAAAACAAAACATA ATAACCACCAACCATTGGACTCATTTATTGCAAAATGTGCTGATGTAACTGATCCAAATG TAGACAGTAAGCGTGTCGAGAACGTGGATGGGAATCTTGGCGTAAATGAGCATCAACATG AAGATAATAATAGCAACGATGATGTAAATAAGAATGAGGTGAATTTGTTCAATTCGAATG AATGCGAGCTTTCAAGCGAAACAATAAACCAAGGTTCTTGTGATGAAGTAGCATCATCGG ACGGGAATTGTGCAGACGTTGAAGGTAGTGATCGATATGACAGTGTTGCATCACTGCAAG TCATTCCAAATGGCTGTGATGAAAATGTAAAACAGTCAGAGATAAATCATATCAACACAG CATTGGAAAAGTTATCTTTGGACACAGTTGTATCGTCACAGTTGTTTTCATGTGATTCAG ATGAATTAAATCAAGCTATTCATTATGCACGAGTTCCACTTGGTCAGAATAAAAGTAACA ATTCAACAGAAGAAGGAGTTACTTCTATTTATGAATGTCTTTCAAAATATACTTCTGCTG AATTATTAACAGGATCTAATCGTTTAATTTGTGATGTATGCACAAAACAAAAATCATTAG ATGAGTTGGATAGTAATTTGGATAGTAAATCAATGGATAAGCAGACGCCTAACAACAACA AGCCAGACATTTTACAAGATACTATCAAACGTGATTTAATCTATAAACCTCCACCGATTC TGACAATACATTTAAAGCGATTTCAACAGGTCGGTTTTCAATTACGAAAATCTCAGAAAC GTATTAACTTCCCAATCTACTTGGATATTACTCCTTTCTGTTCTGTTCCCGCTGTGGTAA ATAGTTTTTTGCCATCTTTCTTTGATAATTATTATTATAACCTCTGTTCGTTTGGCATAC AGAAGTACCCATTGTGTACATTTATATTTGTCAATACTGACCATATGTAGCCTCTGCCAG AGAAGTCCTACTTACTGCCTTCTCGTGGCATTACTGGTGNTTACGANAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)