Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6092 cluster # 6092       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6092#0 length = 1869 sequences # 4  

consensusID : consensus_6092#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1869
fasta sequence
                              [ACAATGAAGTGGGTAACCTTCCTCCTCCTCCTCTTCGTCTCCGACTCTGCTTTTTCCAGGGGATTGTTTCGCCGAGATGCACACAAGAGTGAGATCGCTCATCGGTTTAAAGATTTGGGAGAACAACATTTCAAAGGCCTAGTCCTTATCGCCTTTTCCCAGTTTCTCCAGAAATGCCCATATGAAGAACATGTGAAATTAGTGAATGAAGTAACCGACTTTGCAAAAACATGTGTTGCTGATGAGTCTGCTGAAAACTGTGACAAATCACTTCACACTCTTTTTGGAGATAAGCTTTGTGCCATTCCAACTCTTCGTGACAGCTATGGTGAACTGGCTGACTGCTGTGCAAAAAAAGAACCGGAAAGGAATGAATGTTTCCTGAAACACAAAGATGACCACCCCAACCTGCCCCCATTTGTGAGGCCAGATGCTGAGGCCATGTGCACCTCCTTTCAGGAGAATGCTGTTACGTTTATGGGACACTATCTGCATGAAGTTGCCAGAAGACATCCTTACTTCTATGCCCCAGAGCTCCTTTACTATGCTGAGAAATATAGCGCCATCATGACTGAGTGCTGTGGAGAAGCTGACAAAGCTGCTTGCATCACACCCAAGCTTGATGCTCTGAAGGAGAAAGCATTGGCCTCATCTGTTAATCAAAGACTGAAGTGCTCCAGCTTGCAGAGATTTGGACAGAGAGCTTTCAAAGCATGGGCAGTAGCTCGTATGAGCCAGAAATTCCCCAAGGCTGACTTCGCAGAAATTACCAAGTTGGCAACAGACCTTACCAAACTCACCGAGGAATGCTGCCATGGCGACCTGCTTGAATGCGCAGATGACAGGGCGGAGCTTGCCAAGTACATGTGTGAAAACCAAGCATCTATCTCTAGCAAACTTCAGGCTTGCTGTGACAAGCCAGTGTTGAAGAAATCCCACTGCCTTTCTGAGGTGGAAAATGATGACCTTCCTGCTGACCTGCCTTCATTAGCTGCTGATTTTGTTGAGGATAAGGAAGTGTGCAAGAACTATGCTGAGGCCAAAGACGTCTTCCTGGGCACGTTTTTGTATGAATATGCAAGAAGGCACCCTGACTACTCTGTTGCCCTGCTGCTGAGACTTGCTAAGAAATATGAAGCCACCCTGGAAAAGTGCTGTGCTGAAGCTGACCCTTCTGCATGCTATGGCAAAGTGTTGGATGAATTTCAGCCTCTTGTAGAAGAGCCTAAGAACTTAGTCAAAGCTAACTGTGAACTTTTTGAGAAGCTTGGAGAGTATGGATTCCAAAATGCGCTCATAGTTCGTTACACCCAGAAAGCACCTCAGGTGTCAACTCCAACTCTTGTGGAAGCTGCAAGGAACCTAGGAAAAGTGGGCAGCAAATGCTGTGTACTTCCTGAAGCACAGAGACTACCTTGTGTGGAAGACTATATCTCTGCGATCCTGAACCGAGTTTGTGTGCTGCATGAGAAGACCCCAGTGAGCGAGCAGGTCACCAAGTGCTGTACTGGATCCGTGGTGGAAAGGCGGCCATGTTTCTCTGCCCTGCCCGT-GGATG-AGACCTATGTCCCCAAAGAATTTAAAGCTGAGACCTTCACCTTCCATGCTGATATCTGCTCACTTCCAGAGAAGGAGAAGCAGATGAAGAAGCAAGCGGCACTTGTTGAACTGGTGAAACACAAACCCAAGGCTACGGGTCCACAGCTGAGGACCGTGTTGGGCGAATTTACAGCTTTCTTGGATAAGTGCTGCAAGGCTGAGGACAAGGAGGCCTGCTTCTCCGAAGATGGCCCAAAACTTGTTGCTTCGAGCCAAGCTGCTTTAGCCTAAACACATCGCACGCATCTCAGTCTGCCCTGAGAAAAAAAA]

[+] EMBL AF418550             [ACAATGAAGTGGGTAACCTTCCTCCTCCTCCTCTTCGTCTCCGACTCTGCTTTTTCCAGGGGATTGTTTCGCCGAGATGCACACAAGAGTGAGATCGCTCATCGGTTTAAAGATTTGGGAGAACAACATTTCAAAGGCCTAGTCCTTATCGCCTTTTCCCAGTTTCTCCAGAAATGCCCATATGAAGAACATGTGAAATTAGTGAATGAAGTAACCGACTTTGCAAAAACATGTGTTGCTGATGAGTCTGCTGAAAACTGTGACAAATCACTTCACACTCTTTTTGGAGATAAGCTTTGTGCCATTCCAACTCTTCGTGACAGCTATGGTGAACTGGCTGACTGCTGTGCAAAAAAAGAACCGGAAAGGAATGAATGTTTCCTGAAACACAAAGATGACCACCCCAACCTGCCCCCATTTGTGAGGCCAGATGCTGAGGCCATGTGCACCTCCTTTCAGGAGAATGCTGTTACGTTTATGGGACACTATCTGCATGAAGTTGCCAGAAGACATCCTTACTTCTATGCCCCAGAGCTCCTTTACTATGCTGAGAAATATAGCGCCATCATGACTGAGTGCTGTGGAGAAGCTGACAAAGCTGCTTGCATCACACCCAAGCTTGATGCTCTGAAGGAGAAAGCATTGGCCTCATCTGTTAATCAAAGACTGAAGTGCTCCAGCTTGCAGAGATTTGGACAGAGAGCTTTCAAAGCATGGGCAGTAGCTCGTATGAGCCAGAAATTCCCCAAGGCTGACTTCGCAGAAATTACCAAGTTGGCAACAGACCTTACCAAACTCACCGAGGAATGCTGCCATGGCGACCTGCTTGAATGCGCAGATGACAGGGCGGAGCTTGCCAAGTACATGTGTGAAAACCAAGCATCTATCTCTAGCAAACTTCAGGCTTGCTGTGACAAGCCAGTGTTGAAGAAATCCCACTGCCTTTCTGAGGTGGAAAATGATGACCTTCCTGCTGACCTGCCTTCATTAGCTGCTGATTTTGTTGAGGATAAGGAAGTGTGCAAGAACTATGCTGAGGCCAAAGACGTCTTCCTGGGCACGTTTTTGTATGAATATGCAAGAAGGCACCCTGACTACTCTGTTGCCCTGCTGCTGAGACTTGCTAAGAAATATGAAGCCACCCTGGAAAAGTGCTGTGCTGAAGCTGACCCTTCTGCATGCTATGGCAAAGTGTTGGATGAATTTCAGCCTCTTGTAGAAGAGCCTAAGAACTTAGTCAAAGCTAACTGTGAACTTTTTGAGAAGCTTGGAGAGTATGGATTCCAAAATGCGCTCATAGTTCGTTACACCCAGAAAGCACCTCAGGTGTCAACTCCAACTCTTGTGGAAGCTGCAAGGAACCTAGGAAAAGTGGGCAGCAAATGCTGTGTACTTCCTGAAGCACAGAGACTACCTTGTGTGGAAGACTATATCTCTGCGATCCTGAACCGAGTTTGTGTGCTGCATGAGAAGACCCCAGTGAGCGAGCAGGTCACCAAGTGCTGTACTGGATCCGTGGTGGAAAGGCGGCCATGTTTCTCTGCCCTGCCCGT GGATG AGACCTATGTCCCCAAAGAATTTAAAGCTGAGACCTTCACCTTCCATGCTGATATCTGCTCACTTCCAGAGAAGGAGAAGCAGATGAAGAAGCAAGCGGCACTTGTTGAACTGGTGAAACACAAACCCAAGGCTACGGGTCCACAGCTGAGGACCGTGTTGGGCGAATTTACAGCTTTCTTGGATAAGTGCTGCAAGGCTGAGGACAAGGAGGCCTGCTTCTCCGAAGATGGCCCAAAACTTGTTGCTTCGAGCCAAGCTGCTTTAGCCTAAACACATCGCACGCATCTCAGTCTGCCCTGAGAAAAAAAA]
[+] EMBL AI977304             [                                                                                                                                                                AGTTTCTCCAGAAATGCCCATATGAAGAACATGTGAAATTAGTGAATGAAGTAACCGACTTTGCAAAAACATGTGTTGCTGATGAGTCTGCTGAAAACTGTGACAAATCACTTCACACTCTTTTTGGAGATAAGCTTTGTGCCATTCCAACTCTTCGTGACAGCTATGGTGAACTGGCTGACTGCTGTGCAAAAAAAGAACCGGAAAGGAATGAATGTTTCCTGAAACACAAAGATGACCACCCCAACCTGCCCCCATTTGTGAGGCCAGATGCTGAGGCCATGTGCACCTCCTTTCAGGAGAATGCTGTTACGTTTATGGGACACTATCTGCATGAAGTTGCCAGAAGACATCCTTACTTCTATGCCCCAGAGCTCCTTTACTATGCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI976731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCAAGAAGGCACCCTGACTACTCTGTTGCCCTGCTGCTGAGACTTGCTAAGAAATATGAAGCCACCCTGGAAAAGTGCTGTGCTGAAGCTGACCCTTCTGCATGCTATGGCAAAGTGTTGGATGAATTTCAGCCTCTTGTAGAAGAGCCTAAGAACTTAGTCAAAGCTAACTGTGAACTTTTTGAGAAGCTTGGAGAGTATGGATTCCAAAATGCGCTCATAGTTCGTTACACCCAGAAAGCACCTCAGGTGTCAACTCCAACTCTTGTGGAAGCTGCAAGGAACCTAGGAAAAGTGGGCAGCAAATGCTGTGTACTTGCTGAAGCACAGAGACTACCTTGTGTGGAAGACTATATCTCTGCGATCCTGAACCGAGTTTGTGTGCTGCATGAGAAGACCCCAGTGAGCGAGCAGGTCACCAAGTGCTGTACTGGATCCGTGGTGGAAAGGCGGGCATGTTTCTCTGCCCTGCCCGTGGGATGAAAACCTAa                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI977405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGAGAGTATGGATTCCAAAATGCGCTCATAGTTCGTTACACCCAGAAAGCACCTCAGGTGTCAACTCCAACTCTTGTGGAAGCTGCAAGGAACCTAGGAAAAGTGGGCAGCAAATGCTGTGTACTTCCTGAAGCACAGAGACTACCTTGTGTGGAAGACTATATCTCTGCGATCCTGAACCGAGTTTGTGTGCTGCATGAGAAGACCCCAGTGAGCGAGCAGGTCACCAAGTGCTGTACTGGATCCGTGGTGGAAAGGCGGCCATGTTTCTCTGTCCTGCCCGT GGATG AGACCTATGTCCCCAAAGAATTTAAAGCTGAGACCTTCACCTTCCATGCTGATATCTGCTCACTTCCAGAGAAGGAGAAGCAGATGAAGAAGCAAGCGGCACTTGTTGAACTG                                                                                                                                                                                                      ]


>consensus_6092#0 ACAATGAAGTGGGTAACCTTCCTCCTCCTCCTCTTCGTCTCCGACTCTGCTTTTTCCAGG GGATTGTTTCGCCGAGATGCACACAAGAGTGAGATCGCTCATCGGTTTAAAGATTTGGGA GAACAACATTTCAAAGGCCTAGTCCTTATCGCCTTTTCCCAGTTTCTCCAGAAATGCCCA TATGAAGAACATGTGAAATTAGTGAATGAAGTAACCGACTTTGCAAAAACATGTGTTGCT GATGAGTCTGCTGAAAACTGTGACAAATCACTTCACACTCTTTTTGGAGATAAGCTTTGT GCCATTCCAACTCTTCGTGACAGCTATGGTGAACTGGCTGACTGCTGTGCAAAAAAAGAA CCGGAAAGGAATGAATGTTTCCTGAAACACAAAGATGACCACCCCAACCTGCCCCCATTT GTGAGGCCAGATGCTGAGGCCATGTGCACCTCCTTTCAGGAGAATGCTGTTACGTTTATG GGACACTATCTGCATGAAGTTGCCAGAAGACATCCTTACTTCTATGCCCCAGAGCTCCTT TACTATGCTGAGAAATATAGCGCCATCATGACTGAGTGCTGTGGAGAAGCTGACAAAGCT GCTTGCATCACACCCAAGCTTGATGCTCTGAAGGAGAAAGCATTGGCCTCATCTGTTAAT CAAAGACTGAAGTGCTCCAGCTTGCAGAGATTTGGACAGAGAGCTTTCAAAGCATGGGCA GTAGCTCGTATGAGCCAGAAATTCCCCAAGGCTGACTTCGCAGAAATTACCAAGTTGGCA ACAGACCTTACCAAACTCACCGAGGAATGCTGCCATGGCGACCTGCTTGAATGCGCAGAT GACAGGGCGGAGCTTGCCAAGTACATGTGTGAAAACCAAGCATCTATCTCTAGCAAACTT CAGGCTTGCTGTGACAAGCCAGTGTTGAAGAAATCCCACTGCCTTTCTGAGGTGGAAAAT GATGACCTTCCTGCTGACCTGCCTTCATTAGCTGCTGATTTTGTTGAGGATAAGGAAGTG TGCAAGAACTATGCTGAGGCCAAAGACGTCTTCCTGGGCACGTTTTTGTATGAATATGCA AGAAGGCACCCTGACTACTCTGTTGCCCTGCTGCTGAGACTTGCTAAGAAATATGAAGCC ACCCTGGAAAAGTGCTGTGCTGAAGCTGACCCTTCTGCATGCTATGGCAAAGTGTTGGAT GAATTTCAGCCTCTTGTAGAAGAGCCTAAGAACTTAGTCAAAGCTAACTGTGAACTTTTT GAGAAGCTTGGAGAGTATGGATTCCAAAATGCGCTCATAGTTCGTTACACCCAGAAAGCA CCTCAGGTGTCAACTCCAACTCTTGTGGAAGCTGCAAGGAACCTAGGAAAAGTGGGCAGC AAATGCTGTGTACTTCCTGAAGCACAGAGACTACCTTGTGTGGAAGACTATATCTCTGCG ATCCTGAACCGAGTTTGTGTGCTGCATGAGAAGACCCCAGTGAGCGAGCAGGTCACCAAG TGCTGTACTGGATCCGTGGTGGAAAGGCGGCCATGTTTCTCTGCCCTGCCCGTGGATGAG ACCTATGTCCCCAAAGAATTTAAAGCTGAGACCTTCACCTTCCATGCTGATATCTGCTCA CTTCCAGAGAAGGAGAAGCAGATGAAGAAGCAAGCGGCACTTGTTGAACTGGTGAAACAC AAACCCAAGGCTACGGGTCCACAGCTGAGGACCGTGTTGGGCGAATTTACAGCTTTCTTG GATAAGTGCTGCAAGGCTGAGGACAAGGAGGCCTGCTTCTCCGAAGATGGCCCAAAACTT GTTGCTTCGAGCCAAGCTGCTTTAGCCTAAACACATCGCACGCATCTCAGTCTGCCCTGA GAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)