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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6282 cluster # 6282       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6282#0 length = 535 sequences # 4  

consensusID : consensus_6282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 535
fasta sequence
                              [CGAAGTCAGCAACCCTCTAGTAATAACTGTTTGAGGTGAAGACATGTTGGGAACAGATACTCCCTTTTCAAGATGATATTGTTTGGACAAATCCACTAAAGCTGAGAACGTACGAGGCTCGTAAATAGATAAAATTTGTAGTATGTTTTTATTAAGAGCGATATTAGACTGGGCTAAGCCTTCACACAATGCTCTTGCACTAGGTAAACCACACTGTTCACTAGCTATTTCCAGTCGCTCCATCCACAAGCATTTCATTTCGTTCCTCCGGACTTCTCTTGCATCTTTCATGTACTGGAAGGCCTTGATAACACGGTTAGTGCCTAGTTTATGACATCGGGCCATTCGACCTTTGAAAAAGAAAGCGAATTTCATTAAATTGTCCTTCCGGAACCACCTGTCACATGGCATAAACGGGACAATTTTTCTAATGCAAAGAGCATCTGTTAACTTCATTTTCTT-AAGGGCTGAAAAGTCTGGATGGCAAAAAAGGTCACGGT-AAAAAAGTTA-GACCCTCTTAAATTCCG-CCGCCCTT]

[+] EMBL CD133629             [CGAAGTCAGCAACCCTCTAGTAATAACTGTTTGAGGTGAAGACATGTTGGGAACAGATACTCCCTTTTCAAGATGATATTGTTTGGACAAATCCACTAAAGCTGAGAACGTACGAGGCTCGTAAATAGATAAAATTTGTAGTATGTTTTTATTAAGAGCGATATTAGACTGGGCTAAGCCTTCACACAATGCTCTTGCACTAGGTAAACCACACTGTTCACTAGCTATTTCCAGTCGCTCCATCCACAAGCATTTCATTTCGTTCCTCCGGACTTCTCTTGCATCTTTCATGTACTGGAAGGCCTTGATAACACGGTTAGTGCCTAGTTTATGACATCGGGCCATTCGACCTTTGAAAAAGAAAGCGAATTTCAGTTAATTGTCCTTCCGGAACCACCTGTCACATGGCATAAACGGGACAATTTTTCTAATGCAAAGAGCATTTGTTAACTTCATTTTCTTAAAGGCCTGAATAGTCTGGATGGCCAAAAAGGTCACGGTAAAAAAAGTTACTCCCCTCTTAAATTCCG CCGCCCTT]
[+] EMBL BG930974             [                                                                                                                     aTCGTAAATATATAAAATTTGTAGTATGTTTTTATTAAGAGCGATATTAGACTGGGCTAATCCTTCACACAATGCTCTTGCACTAGGTAAACCACACTGTTCACTAGCTATTTCCAGTCGCTCCATCCACAAGCATTTCATTTCGTTCCCCCGGACTTCTCTTGCATCTTTCATGTACTGGAAGGCCTTGATAACACGGTTAGTGCCTAGTTTA                                                                                                                                                                                                                ]
[-] EMBL CD148132             [                                                                                                                                                                                    TTCACACAATGCTCTTGCACTAGGTAAACCACACTGTTCACTAGCTATTTCCAGTCGCTCCATCCACAAGCATTTCATTTCGTTCCTCCGGACTTCTCTTGCATCTTTCATGTACTGGAAGGCCTTGATAACACGGTTAGTGCCTAGTTTATGACATCGGGCCATTCGACCTTTGAAAAAGAAAGCGAATTTCATTAAATTGTCCTTCCGGAACCACCTGTCACATGGCATAAACGGGACAATTTTTCTAATGCAAAGAGCATCTGTTAACTTCATTTTCTT AAGGGCTGAAAAGTCTGGATGGCAAAAAAGGTCACGGT AAAAAAGTTA GACCCTCTTAAA TCCGCCCGCCgt ]
[-] EMBL CD189352             [                                                                                                                                                                                                                                                                                                                                    TAGTTTATAACATCGGGCCATTCGACCTTTGAAAAAGAAAGCGAATTTCATTAAATTGTCCTTCCGGAACCACCTGTCACATGGCATAAACGGGACAATTTTTCTAATGCAAAGAGCATCTGTTAACTTCATTTTCTT AAGGGCTGAAAAGTCTGGATGGCAAAAAAGGTCACGGT AAAAAAGTTA GACCCTCTTA                ]


>consensus_6282#0 CGAAGTCAGCAACCCTCTAGTAATAACTGTTTGAGGTGAAGACATGTTGGGAACAGATAC TCCCTTTTCAAGATGATATTGTTTGGACAAATCCACTAAAGCTGAGAACGTACGAGGCTC GTAAATAGATAAAATTTGTAGTATGTTTTTATTAAGAGCGATATTAGACTGGGCTAAGCC TTCACACAATGCTCTTGCACTAGGTAAACCACACTGTTCACTAGCTATTTCCAGTCGCTC CATCCACAAGCATTTCATTTCGTTCCTCCGGACTTCTCTTGCATCTTTCATGTACTGGAA GGCCTTGATAACACGGTTAGTGCCTAGTTTATGACATCGGGCCATTCGACCTTTGAAAAA GAAAGCGAATTTCATTAAATTGTCCTTCCGGAACCACCTGTCACATGGCATAAACGGGAC AATTTTTCTAATGCAAAGAGCATCTGTTAACTTCATTTTCTTAAGGGCTGAAAAGTCTGG ATGGCAAAAAAGGTCACGGTAAAAAAGTTAGACCCTCTTAAATTCCGCCGCCCTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)