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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6380 cluster # 6380       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6380#0 length = 512 sequences # 4  

consensusID : consensus_6380#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 512
fasta sequence
                              [ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANAAACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTGACAATCGAAAAATTCATCATCTGACTCATAGC]

[-] EMBL CD190028             [ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTTTAACATTGATCGAAAACGAACCAGGGTTTGT                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD164198             [           CCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANAAACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTGACAATCGAAAAATTCATCATCTGACTCATAGC]
[+] EMBL CD181981             [           CCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCTTCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTC ACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACGGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAg                                                                                                                ]
[-] EMBL CD193698             [                                                                                                                                                                                                                                                                  TTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTC                                                                                                          ]


>consensus_6380#0 ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTT GACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATAT TGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAAC AGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGC GCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAG GTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAA CTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANA AACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTG ACAATCGAAAAATTCATCATCTGACTCATAGC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)