cluster # 6480

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Schistosoma mansoni
cluster # 6480 cluster # 6480 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6480#0 length = 731 sequences # 4

consensusID : consensus_6480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 731
fasta sequence

                              [TCGAGAGAATATTACTTTTTCTGCTACACTACGATTACCTCGTGGTACTGCCGCACGTGAAAGAGACGAAAAAGTGTCCAGTGTCATTGAAGAACTTGGTCTTACCTCTGTCGCTGATCGGATAATTGGAACTCAATCGACCTGTGGTGTTTCTGGGGGTGAACGTAAACGTACATGTATTGGTATTGAATTAGTGAATGATCCTTTAGTTCTCTATCTGGATGAACCTACAACAGGTTTAGATTCATACACTGCTGGAACAGTAATTCAAACACTTAGACGATTAGCAGACTCTGGTCGGACAATTG-TTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACTTACTATAATTTCCAATGGACAAATGATTTACCATGGACCTGGTGGTCAAACACCAATTGTTTATTTTGAAAATTGTGGTTATTTCATCGAAGGTCATAATAATCCAGCAGATTTCTTCATGGATATTTTGCATGGAGAATTTGATATTGATGAAACAGTTGTACAACAAAAGAATATTGCAGGTACAAGTGAGAAAGATGTTTGTAAAACTGTCCGTGAAACGGTTTGTCGTAAACTTATTGCGTGCTGGCTAAAGTCTACACTATGGAGGCAATGCAAAGTATTTCTAGCAGAATGTAGTGAGAATTTTCATCAAAATAGATTACGTCGACTGAAACAGANAAACAAGATCAAAATACATTCAACGACGA]

[-] EMBL CD146757             [TCGAGAGAATATTACTTTTTCTGCTACACTACGATTACCTCGTGGTACTGCCGCACGTGAAAGAGACGAAAAAGTGTCCAGTGTCATTGAAGAACTTGGTCTTACCTCTGTCGCTGATCGGATAATTGGAACTCAATCGACCTGTGGTGTTTCTGGGGGTGAACGTAAACGTACATGTATTGGTATTGAATTAGTGAATGATCCTTTAGTTCTCTATCTGGATGAACCTACAACAGGTTTAGATTCATACACTGCTGGAACAGTAATTCAAACACTTAGACGATTAGCAGACTCTGGTCGGACAATTG TTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACTTACTATAATTTCCAATGGACAAATGATTTACCATGGACCTGGTGGTCAAACACCAATTGTTTATTTTGAAAATTGTGGTTATTTCATCGAAGGTCATAATAATCCAGCAGATTTCTTCATGGATATTTTGCATGGAGAATTTGATATTGATGAAACAGTTGTACAACAA                                                                                                                                                                                                          ]
[-] EMBL CD150204             [                                                                                                     TTACCTCTGTCGCTGATCGGATAATTGGAGCTCAATCGACCTGTGGTGTTTCTGGGGGTGAACGTAAACGTACCTGTATTGGTATTGAATTAGTGAATGATCCTTTAGTTCTCTATCTGGATGAACCTACAACAGGTTTAGATTCATACACTGCTGGAACAGTAATTCAAACACTTAGACGATTAGCAGACTCTGGTCGGACAATTGTTTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACTTAC                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD153086             [                                                                                                                                                                   CGTAAACGTACATGTATTGGTATTGAATTAGTGAATGATCCTTTAGTTCTCTATCTGGATGAACCTACAACAGGTTTAGATTCATACACTGCTGGAACAGTAATTCAAACACTTAGACGATTAGCAGACTCTGGTCGGACAATTG TTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACTTACTATAATTTCCAATGGACAAATGATTTACCATGGACCTGGTGGTCAAACACCAATTGTTTATTTTGAAAATTGTGGTTATTTCATCGAAGGTCATAATAATCCAGCAGATTTCTTCATGGATATTTTGCATGGAGAATTTGATATTGGTGAAACAGTTGTACAACAAAAGAATATTGCAGGTACAAGTGAGAAAGATGTTTGTAAAACTGTCCGTGAAACGGTTTGTCGTAAACTTATTGCGTGCTGGCTAAAGTCTACACTATGGAGGCAATGCAAAGTATTTCTAGCAGAATGTAGTGAGAATTTTCATCAAAATAGATTACGTCGACTGAAACAGANAAACAAGATCAAAATACATTCAACGACGA]
[+] EMBL CD162218             [                                                                                                                                                                                                                                                                                                                  TG TTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACTTACTATAATTTCCAATGGACAAATGATTTACCATGGACCTGGTGGTCAAACACCAATTGTTTACTTTGAAAATTGTGGTTATTTCATCGAAGGTCTTAATAATCCAGCAGACTTCTTCATGGATATTTTGCATGGAGAATTTGATATTGATGAAACAGTTGTACAACAAAAGAATATTGCAGGTACAAGTGAGAAAGATGTTTGTAAAACTGTCCGTGAAACGGTTTGTCGTAAACTTATTGCGTGCTGGCTAAAGTCTACACTA                                                                                                          ]




>consensus_6480#0
TCGAGAGAATATTACTTTTTCTGCTACACTACGATTACCTCGTGGTACTGCCGCACGTGA
AAGAGACGAAAAAGTGTCCAGTGTCATTGAAGAACTTGGTCTTACCTCTGTCGCTGATCG
GATAATTGGAACTCAATCGACCTGTGGTGTTTCTGGGGGTGAACGTAAACGTACATGTAT
TGGTATTGAATTAGTGAATGATCCTTTAGTTCTCTATCTGGATGAACCTACAACAGGTTT
AGATTCATACACTGCTGGAACAGTAATTCAAACACTTAGACGATTAGCAGACTCTGGTCG
GACAATTGTTTTTTCAATCCATCAGCCAAAATATTCAATTTATCGTCTATTTGATCGACT
TACTATAATTTCCAATGGACAAATGATTTACCATGGACCTGGTGGTCAAACACCAATTGT
TTATTTTGAAAATTGTGGTTATTTCATCGAAGGTCATAATAATCCAGCAGATTTCTTCAT
GGATATTTTGCATGGAGAATTTGATATTGATGAAACAGTTGTACAACAAAAGAATATTGC
AGGTACAAGTGAGAAAGATGTTTGTAAAACTGTCCGTGAAACGGTTTGTCGTAAACTTAT
TGCGTGCTGGCTAAAGTCTACACTATGGAGGCAATGCAAAGTATTTCTAGCAGAATGTAG
TGAGAATTTTCATCAAAATAGATTACGTCGACTGAAACAGANAAACAAGATCAAAATACA
TTCAACGACGA

clustalw multiple alignements is not computed in this case