Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6632 cluster # 6632       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6632#0 length = 1023 sequences # 4  

consensusID : consensus_6632#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1023
fasta sequence
                              [AAAATTTTCACTTCTGGGACCACTATGTGGAATTTTCATGTCTCACTTCCGACAAAATTAGCTCAAGTAATAAAATTCAAACAACCATTCAGAACACGTATCTACCATTACGCTCTCCAACCCAAGATGGTTAAATATAATGAGTCAATAGACCCAGAAGATCCTCGTCTTGTAAAAGCCGTTGCTCCAGCACAAAAATGGGAACATACGGGTTCTAATTATGATGAACTTGTCTCAAGAATTGTGGGGATGATGACTATTAGAGGCGAAAGAGAGGTGGCTAGAAATGTAATGCGCATGACGTTTAGAGAAATAAAACTAATACAGATGCGAAAAAACAAAAGTAATGCTACTGTTATTAATCCCATTACTGTGATTCATGAAGCAGTAAAGAACTGTACACCTTTACTACTGCTACAATCAGTACCACGTGGTGGTATTTTATACAAGGTTCCTGCCCCTCCAGTATCTTCTTCAGTTGCCACGCATACTGCAGTGAAATTTATTTTGGACGCAGCTAGAGGAAAGCCACGTGATCAACGCATATGGATATCTCTGGCAAACGAATTTATGACAGCTTCACAAAACCAAGGGAAAGCTGTCAAATACAAGGTTGAATTACATAAACAATGTGAAGAGAATCGGGCATATGCTAATTTTAGGTCCCATTAGCTAATTTCCTTACAAATTGTTTTTTTATAGAAATCGCACGCTTGTAAAAATCCATTTGTTATAATAGATATTTTTTTTATAAACATATCTTTTCGTGTGTATCTTGTCCTTTAAATTTACTTCCAAGAATGTTTGCCTCAGTGTTTGCATTAGAAAGCCTATCTGATGAATATTTAGTTTTCTCAAATAAAATTATCACTGTCTTCTGTTGAACTGGTGGGCTACATTGCTCTAGTTCATTGGAATTATTGAACATCTGAACAACTAAATCGCTTTAGTATGGAACAACATTCTTGCTAATGTTACAATCCTGTATCTATTTTGGGTTTCCTATAAACCTATAGCTTATGG]

[+] EMBL CD078547             [AAAATTTTCACTTCTGGGACCACTATGTGGAATTTTCATGTCTCACTTCCGACAAAATTAGCTCAAGTAATAAAATTCAAACAACCATTCAGAACACGTATCTACCATTACGCTCTCCAACCCAAGATGGTTAAATATAATGAGTCAATAGACCCAGAAGATCCTCGTCTTGTAAAAGCCGTTGCTCCAGCACAAAAATGGGAACATACGGGTTCTAATTATGATGAACTTGTCTCAAGAATTGTGGGGATGATGACTATTAGAGGCGAAAGAGAGGTGGCTAGAAATGTAATGCGCATGACGTTTAGAGAAATAAAACTAATACAGATGCGAAAAAACAAAAGTAATGCTACTGTTATTAATCCCATTACTGTGATTCATGAAGCAGTAAAGAACTGTACACCTTTACTACTGCTACAATCAGTACCACGTGGTGGTATTTTATACAAGGTTCCTGCCCCTCCAGTATCTTCTTCAGTTGCCACGCATACTGCAGTGAAATTTATTTTGGACGCAGCTAGAGGAAAGCCACGTGATCAACGCATATGGATATCTCTGGCANACGAATTTATGACAGCTTCACAAAACCAAGGGAAAGCTGTCAAATACAAG                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD077793             [                                                          TAGCTCAGGTAATAAAAATCAAACAACCATTCAGAACACGTATCTACCATTACGCTCTCCAACCCAAGATGGTTAAATATAATGAGTCAATAGACCCAGAAGATCCTCGTCTTGTAAAAGCCGTTGCTCCAGCACAAAAATGGGAACATACGGGTTCTAATTATGATGAACTTGTCTCAAGAATTGTGGGGATGATGACTATTAGAGGCGAAAGAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD073014             [                                                                                                                                                                                                                                                                                  AGGTGGCTAGAAATGTAATGCGCATGACGTTTAGAGAAATAAAATTAATACAGATGCGAAAAAACAAAAGTAATGCTACTGTTATTAATCCCATTACTGTGATTCATGAAGCAGTAAAGAACTGTACCCCTTTACTACTGGTACAATCAGTACCACGTGGTGGTATTTTATACAAGGTTCCTGCCCCTCCAGTATTTTTTTCAGTTGCCACGCATACTGCAGTGAAATTTATTTTGGACGCAGCTAAAGGAAAGCCACGTGATCAACGCATATGGATATTTTTGGCAAACGAATTTATGACAGCTTCCCAAAACCAAGGGAAAGCTGTCAAATACAAGGTTGAATTACATAAACAATGTGAAGAGAATCGGGCATATGCTAATTTTAGGTCCCATTAGCTAATTTCCTTACAAATTGTTTTTTTATAGAAATCGCACGCTTGTAAAAATCCATTTGTTATAATAGATAT                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD145227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGCATATGGATATCTCTGGCAAACGAATTTATGACAGCTTCACAAAACCAAGGGAAAGCTGTCAAATACAAGGTTGAATTACATAAACAATGTGAAGAGAATCGTGCATATGCTAATTTTAGGTCACATTAGCTAATTTCCTTACAAATTGTTTTTCTATAGAAATCGCACGCTTGTAAATATCCATTTGTTGTAATAGATATTTTTTTTATAAACATATCTTTTCGTGTGTATCTTGTCCTTTAAATTTACTTCCAAGAATGTTTGCCTCAGTGTTTGCATTAGAAAGCCTATCTGATGAATATTTAGTTTTCTCAAATAAAATTATCACTGTCTTCTGTTGAACTGGTGGGCTACATTGCTCTAGTTCATTGGAATTATTGAACATCTGAACAACTAAATCGCTTTAGTATGGAACAACATTCTTGCTAATGTTACAATCCTGTATCTATTTTGGGTTTCCTATAAACCTATAGCTTATGG]


>consensus_6632#0 AAAATTTTCACTTCTGGGACCACTATGTGGAATTTTCATGTCTCACTTCCGACAAAATTA GCTCAAGTAATAAAATTCAAACAACCATTCAGAACACGTATCTACCATTACGCTCTCCAA CCCAAGATGGTTAAATATAATGAGTCAATAGACCCAGAAGATCCTCGTCTTGTAAAAGCC GTTGCTCCAGCACAAAAATGGGAACATACGGGTTCTAATTATGATGAACTTGTCTCAAGA ATTGTGGGGATGATGACTATTAGAGGCGAAAGAGAGGTGGCTAGAAATGTAATGCGCATG ACGTTTAGAGAAATAAAACTAATACAGATGCGAAAAAACAAAAGTAATGCTACTGTTATT AATCCCATTACTGTGATTCATGAAGCAGTAAAGAACTGTACACCTTTACTACTGCTACAA TCAGTACCACGTGGTGGTATTTTATACAAGGTTCCTGCCCCTCCAGTATCTTCTTCAGTT GCCACGCATACTGCAGTGAAATTTATTTTGGACGCAGCTAGAGGAAAGCCACGTGATCAA CGCATATGGATATCTCTGGCAAACGAATTTATGACAGCTTCACAAAACCAAGGGAAAGCT GTCAAATACAAGGTTGAATTACATAAACAATGTGAAGAGAATCGGGCATATGCTAATTTT AGGTCCCATTAGCTAATTTCCTTACAAATTGTTTTTTTATAGAAATCGCACGCTTGTAAA AATCCATTTGTTATAATAGATATTTTTTTTATAAACATATCTTTTCGTGTGTATCTTGTC CTTTAAATTTACTTCCAAGAATGTTTGCCTCAGTGTTTGCATTAGAAAGCCTATCTGATG AATATTTAGTTTTCTCAAATAAAATTATCACTGTCTTCTGTTGAACTGGTGGGCTACATT GCTCTAGTTCATTGGAATTATTGAACATCTGAACAACTAAATCGCTTTAGTATGGAACAA CATTCTTGCTAATGTTACAATCCTGTATCTATTTTGGGTTTCCTATAAACCTATAGCTTA TGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)