These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6772#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 797 fasta sequence [TTNNTTTTTTAGTTTTGTTATGATCATATATTTACATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGAACGAGTCACA-CTTTGTGATGGAT-GAAGTAAACTGTTAACCATTT-CTTCGTCTGCTCCTGAAGCCCGATCAATGATCTCATTTCCATCCTCTTCTTCGAAGTTAGCACAAACACCAATTTGAAATGAGCTGAAATGTGGTCTGGCCGAGTTGCCCGTGTTCTGGCCCTCGGAAGTGTCTTGTCGATTCAAGCCGCGACTTGAAATTGGTGGATTGGTCATTATATCTCTCAGATGACTGTTAGCACCCTTAGGATCAAGCTCCATAGCCCATGAGTAATGAATCATTGCTTGTGGTGTATTCCCCAGTTTTTTGTAGGTATGACCAATCATCAAGTAAACCATGGCCTCACGTGGAGTTAAAACCAAAAGTTTTTGAAGCTCCGATAATACTTCAGAATAACGTCCAAGATGATATAAAATAGATGCTTTG] [+] EMBL CD075532 [ NNTTTTTTAGTTTTGTTATGATCATATATTTACATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGAACGAGTCACA CTTTGTGATGGAT GAAGTAAACTGTTAACCATTT CTTCGTCTGCTCCTGAAGCCCGATCAATGATCTCATTTCCATCCTCTTCTTCGAAGTTAGCACAAACACCAATTTGAAATGAGCTGAAATGTGGTCTGGCCGAGTTGCCCGTGTTCTGGCCCTCGGAAGTGTCTTGTCGATTCAAGCCGCGACTTGAAATTGGTGGATTGGTCATTATATCTCTCAGATGACTGTTAGCACCCTTAGGATCAAGCTCCATAGCCCATGAGTAATGAATCATTGCTTGTGGTGTATTCCCCAGTTTTTTGTAGGTATGACCAATCATCAAGTAAACCATGGCCTCACGTGGAGTTAAAACCAAAAGTTTTTGAAGCTCCGATAATACTTCAGAATAACGTCCAAGATGATATAAAATAGATGCTTTG] [+] EMBL AI395014 [ttttTTTTTTTTTTTTGTGATGATCATATATTTATATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCA TCAGTCGGCGAACTAAGTTTGAACGAGTCACACCTTTGTGATGGATGGAATTAA ] [-] EMBL SM615 [ TTTGAACCGAAACTTGNANATGTTTTATGNGGAAGTAAATAAGACTGNCCCAAATTAAGGGATGGAAATAAAAAGTGNTGTTTTATCAATATCACATNAGAATAGNTGGATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGNACGAGTCACA CTTTGTGATGGAT GAAGTAAACTGTTTACCATTTCCTTCGTCTGCTCCTGAAGCC ] [-] EMBL CD138338 [ GGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||