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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6918 cluster # 6918       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6918#0 length = 1012 sequences # 4  

consensusID : consensus_6918#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1012
fasta sequence
                              [AATTATCCTGTGAAACTTAACAAACGTGAACCTCGTAAACAAAATACTGTTATTCTAATCACACATACTTCGAGAAAGGAGAATGAAGCACTAAAACATTACTACCTACTTTTACAACGACCTAAAACAGGCCTTTTGGCTGGTTTATGGGAATTTCCAAGTTATACCATTGAAGATAACAAGTTGACGAGTGAAAATCAATCATCATCAATTATTCCTTTAGTTATTGATCGAATTACAAATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTAAATGTGAAACCTATTGGAGAGGTTTTACATATTTTCTCGCATATACACATGACGTATATCGTATTCGAGTTAAAAGGTGAAAAAGATC-ACAAACAATTTCC-TCTGAATGTTNAAATANNTCT-ATACTACTACCACTACTACTTATGATTGGCCGCCTAGTTTAAATTCTGGTCGATGGGTTAGTCGTGAAGATTTAAACGACTCCGCTATATCTACTGCTACTAGAAAGGTATTCGCTCATTTTGAAAGCTACTCGAAATCATCACATTCTGATGTTGATAGAAATCAACGAAAAACTAAAAGAACCTCTGTAAACAAACAATCATTCGACTCCAAACAATCAAAATTAGATAATTTCTTTCATTAGTGCCGGATTCTTTTGCTTCGGATGAACAAACAGTCAAAATGGTGAAGAAATTCTTTTTGTTGATCCTAATCAGTCAGTCAGTCAGTTATCTACAACGTAGGTCCTAATATCTACTAGTGGCAGTAATAATAACGATAATAATAATTATTGTTATCGAATGTATGTATTACTATACCGTTTCCTTTATATCCTGATTTACCCTATTCCATACAATTTCAAATGATTCTATTTTACCTTGATAGAATATTTTTCTTATTTTTTATATAAATTNTTATCTATTCGAGTTTTTTCTTTCTGAATTCTTTCTCATGTGAACCATAATGATACATCTTTACTTTGTCCAAAATAAATAATAAACAA]

[+] EMBL CD165320             [AATTATCCTGTGAAACTTAACAAACGTGAACCTCGTAAACAAAATACTGTTATTCTAATCACACATACTTCGAGAAAGGAGAATGAAGCACTAAAACATTACTACCTACTTTTACAACGACCTAAAACAGGCCTTTTGGCTGGTTTATGGGAATTTCCAAGTTATACCATTGAAGATAACAAGTTGACGAGTGAAAATCAATCATCATCAATTATTCCTTTAGTTATTGATCGAATTACAAATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTANATGTGAAACCTATTGGAGAGGTTTTACATATTTTCTCGCATATACACATGACGTATATCGTATTCGAGNTAAAAAGTGAAAAAGATC ACAANCNATTTCCNTCTG ATGTTNAANTATNTCT ATACTACTACCACTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD165347             [AATTATCCTGTGAAACTTAACAAACGTGAACCTCGTAAACAAAATACTGTTATTCTAATCACACATACTTCGAGAAAGGAGAATGAAGCACTAAAACATTACTACCTACTTTTACAGCGACCTAAAACAGGCCTTTTGGCTGGTTTATGGGAATTTCCAAGTTATACCATTGAAGATAACAAGTTGACGAGTGAAAATCAATCATCATCAATTATTCCTTTAGTTATTGATCGAATTACAAATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTAAATGTNGAACCTATTGNAGAGGTTCTACATATTTTCTCGCATATACACATGACGTATATCGTATTCGAGTTAAAAGNTGAAAAAGATC ACAAACAATTCCN TCTGAATGNTNNAATANNTCT ATACTACTACCACTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD165292             [AATTATCCTGTGAAACTTAACAAACGTGAACCTCGTAAACAAAATACTGTTATTCTAATCACACATACTTCGAGAAAGGAGAATGAAGCACTAAAACATTACTACCTACTTTTACAACGACCTAAAACAGGCCTTTTGGCTGGTTTATGGGAATTTCCAAGTTATACCATTGAAGATAACAAGTTGACGAGTGAAATTCAATCATCATCAATTATTCCTTTAGTTATTGATCGAATTACAAATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTAAATGTGAAACCTATTGGAGAGG TTTACATATTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD081269             [                                                                                                                                                                                                                                 ATTGATCGAATTACAAATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTAAATGTGAAACCTATTGGAGAGGTTTTACATATTTTCTCGCATATACACATGACGTATATCGTATTCGAGTTAAAAGTTGAACAAGATCAACAAACAATTTCC TCTGAATGTTTAAATAATTCTAATACTACTACCACTACTACTTATGATTGGCCGCCTAGTTTAAATTCTGGTCGATGGGTTAGTCGTGAAGATTTAAACGACTCCGCTATATCTACTGCTACTAGAAAGGTATTCGCTCATTTTGAAAGCTACTCGAAATCATCACATTCTGATGTTGATAGAAATCAACGAAAAACTAAAAGAACCTCTGTAAACAAACAATCATTCGACTCCAAACAATCAAAATTAGATAATTTCTTTCATTAGTGCCGGATTCTTTTGCTTCGGATGAACAAACAGTCAAAATGGTGAAGAAATTCTTTTTGTTGATCCTAATCAGTCAGTCAGTCAGTTATCTACAACGTAGGTCCTAATATCTACTAGTGGCAGTAATAATAACGATAATAATAATTATTGTTATCGAATGTATGTATTACTATACCGTTTCCTTTATATCCTGATTTACCCTATTCCATACAATTTCAAATGATTCTATTTTACCTTGATAGAATATTTTTCTTATTTTTTATATAAATTNTTATCTATTCGAGTTTTTTCTTTCTGAATTCTTTCTCATGTGAACCATAATGATACATCTTTACTTTGTCCAAAATAAATAATAAACAA]


>consensus_6918#0 AATTATCCTGTGAAACTTAACAAACGTGAACCTCGTAAACAAAATACTGTTATTCTAATC ACACATACTTCGAGAAAGGAGAATGAAGCACTAAAACATTACTACCTACTTTTACAACGA CCTAAAACAGGCCTTTTGGCTGGTTTATGGGAATTTCCAAGTTATACCATTGAAGATAAC AAGTTGACGAGTGAAAATCAATCATCATCAATTATTCCTTTAGTTATTGATCGAATTACA AATGCATTGAATTCTTCACTGAATATAACTTCAGTTAATGAATTAAATGTGAAACCTATT GGAGAGGTTTTACATATTTTCTCGCATATACACATGACGTATATCGTATTCGAGTTAAAA GGTGAAAAAGATCACAAACAATTTCCTCTGAATGTTNAAATANNTCTATACTACTACCAC TACTACTTATGATTGGCCGCCTAGTTTAAATTCTGGTCGATGGGTTAGTCGTGAAGATTT AAACGACTCCGCTATATCTACTGCTACTAGAAAGGTATTCGCTCATTTTGAAAGCTACTC GAAATCATCACATTCTGATGTTGATAGAAATCAACGAAAAACTAAAAGAACCTCTGTAAA CAAACAATCATTCGACTCCAAACAATCAAAATTAGATAATTTCTTTCATTAGTGCCGGAT TCTTTTGCTTCGGATGAACAAACAGTCAAAATGGTGAAGAAATTCTTTTTGTTGATCCTA ATCAGTCAGTCAGTCAGTTATCTACAACGTAGGTCCTAATATCTACTAGTGGCAGTAATA ATAACGATAATAATAATTATTGTTATCGAATGTATGTATTACTATACCGTTTCCTTTATA TCCTGATTTACCCTATTCCATACAATTTCAAATGATTCTATTTTACCTTGATAGAATATT TTTCTTATTTTTTATATAAATTNTTATCTATTCGAGTTTTTTCTTTCTGAATTCTTTCTC ATGTGAACCATAATGATACATCTTTACTTTGTCCAAAATAAATAATAAACAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)