cluster # 6942

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Schistosoma mansoni
cluster # 6942 cluster # 6942 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6942#0 length = 560 sequences # 4

consensusID : consensus_6942#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 560
fasta sequence

                              [GAACCAAGTCCAACACAAACACCGACTCCAACACCAAGATATTTACAAAATAATAATGCTAATTCATCTGAAATTCAACGTCCCACAACAACACCAAATAATCGTCCAACACTCATCGACAATCAATATTCGAGTACATCATCAACATCATCAACATCTGCGTTTGCACCTGTGCGTTCATCAGCAAACACCAGCAGCTATTATTCTTCGACACCATCTTATAATACATCTCATTCCACAAATGCTTCAGTCGCAACAGCACCAACCGATGATCCAATTATTCGTCGAGCTCTTGAACGATTCAATTGTCAAGTTCAAAATAGTTTAATGACTACTTCAGCTTATTCACGTCCAACACAACCAAATCAATATTATGATCAGAATCCACGTTCAAATATCATGACAACGAGTGGTGGATATCAATCTATCATTGGTCGTCGTCGTCAAACACGTTACGATGAAGTTCCAACCTATCAAAAAGATCAATTATCGTCGGTAGGTGATGGTTATTCATCATCTGTTTTTGCTAATCCTCCTCAATCTTATTACATGAATATGTC]

[+] EMBL CD087257             [GAACCAAGTCCAACACAAACACCGACTCCAACACCAAGATATTTACAAAATAATAATGCTAATTCATCTGAAATTCAACGTCCCACAACAACACCAAATAATCGTCCAACACTCATCGACAATCAATATTCGAGTACATCATCAACATCATCAACATCTGCGTTTGCACCTGTGCGTTCATCAGCAAACACCAGCAGCTATTATTCTTCGACACCATCTTATAATACATCTCATTCCACAAATGCTTCAGTCGCAACAGCACCAACCGATGATCCAATTATTCGTCGAGCTCTTGAACGATTCAATTGTCAAGTTCAAAATAGTTTAATGACTACTTCAGCTTATTCACGTCCAACACAACCAAATCAATATTATGATCAAAATCCACGTTCAAATATCATGACAACGAGTGGTGGATATCAATCTATCATTGGTCGTCGTCGTCA                                                                                                                  ]
[+] EMBL CD087258             [GAACCAAGTCCAACACAAACACCGACTCCAACACCAAGATATTTACAAAATAATAATGCTAATTCATCTGAAATTCAACGTCCCACAACAACACCAAATAATCGTCCAACACTCATCGACAATCAATATTCGAGTACATCATCAACATCATCAACATCTGCGTTTGCACCTGTGCGTTCATCAGCAAACACCAGCAGCTATTATTCTTCGACACCATCTTATAATACATCTCATTCCACAAATGCTTCAGTCGCAACAGCACCAACCGATGATCCAATTATTCGTCGAGCTCTTGAACGATTCAATTGTCAAGTTCAAAATAGTTTAATGACTACTTTAGCTTATTCACGTCCCACACAACCCAATCA                                                                                                                                                                                                ]
[-] EMBL CD087248             [                                                                                                                                                                         CTGTGCGTTCATCAGCAAACACCAGCAGCTATTATTCTTCGACACCATCTTATAATACATCTCATTCCACAAATGCTTCAGTCGCAACAGCACCAACCGATGATCCAATTATTCGTCGAGCTCTTGAACGATTCAATTGTCAAGTTCAAAATAGTTTAATGACTACTTCAGCTTATTCACGTCCAACACAACCAAATCAATATTATGATCAGAATCCACGTTCAAATATCATGACAACGAGTGGTGGATATCAATCTATCATTGGTCGTCGTCGTCAAACACGTTACGATGAAGTTCCAACCTATCAAAAAGATCAATTATCGTCGGTAGGTGATGGTTATTCATCATCTGTTTTTGCTAATCCTCCTCAATCTTATTACATGAATATGTC]
[-] EMBL CD087256             [                                                                                                                                                                                                                                                                                                                                                                          AAATCAATATTATGATCAGAATCCACGTTCAAATATCATGACAACGAGTGGTGGATATCAATCTATCATTGGTCGTCGTCGTCAAACACGTTACGATGAAGTTCCAACCTATCAAAAAGATCAATTATCGTCGGTAGGTGATGGTTATTCATCATCTGTTTTTGCTAATCCTCCTCAATCTTATTACATGAATATGTC]




>consensus_6942#0
GAACCAAGTCCAACACAAACACCGACTCCAACACCAAGATATTTACAAAATAATAATGCT
AATTCATCTGAAATTCAACGTCCCACAACAACACCAAATAATCGTCCAACACTCATCGAC
AATCAATATTCGAGTACATCATCAACATCATCAACATCTGCGTTTGCACCTGTGCGTTCA
TCAGCAAACACCAGCAGCTATTATTCTTCGACACCATCTTATAATACATCTCATTCCACA
AATGCTTCAGTCGCAACAGCACCAACCGATGATCCAATTATTCGTCGAGCTCTTGAACGA
TTCAATTGTCAAGTTCAAAATAGTTTAATGACTACTTCAGCTTATTCACGTCCAACACAA
CCAAATCAATATTATGATCAGAATCCACGTTCAAATATCATGACAACGAGTGGTGGATAT
CAATCTATCATTGGTCGTCGTCGTCAAACACGTTACGATGAAGTTCCAACCTATCAAAAA
GATCAATTATCGTCGGTAGGTGATGGTTATTCATCATCTGTTTTTGCTAATCCTCCTCAA
TCTTATTACATGAATATGTC

clustalw multiple alignements is not computed in this case