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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6949 cluster # 6949       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6949#0 length = 1108 sequences # 4  

consensusID : consensus_6949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1108
fasta sequence
                              [ATGTGCGTCAGCTTCTTCTTCAGGTCTTAATACGGCAATCACATTCGCACCATCTCGTATGTTGAGCAACAACAATGTAAGGAAGTTGAGTAATTGACCAGTAGGAATTTGATTAGCAACACCTATTGAGTTTAATTTAGCAGCATCACGACAAAATTCTGCCAAGTCTTCAGACGATATTATAGTCTCAGTTGATAAGCTTTCTTTATCAAGATATGAAATCACATCTTCACAATTAGATTTTCGTAGTTGATCATCACTGTTCGGTACGCCACCAAGGCTTCTCAAAAAGTCTGTTTCCTCAATAGATTCGAGAACAGTTGACAACTTGTTGAGAAATCGTTTTACACTTCCCGTTTCACCTCCAACACTTTGTTCCCTAGGATTATTTCGTTGGATGGGTAAATTATTTGATGCCGTAATTCCGAAATTTACGCGTTCACGTCGTTTACGCGTAGATTCTCCTGCTTTACGTATATGCGGGAAACGTGCTTCAACAGGTTCCTTCAGCCGAACTTCAAAAGGTTCATCATCATCCAGTTTCTTTCGTCTTCTAGCACTTGAAGAGCCATTTGAGCACCCTGTTTGACTTGCCGACGCTTCCTCGTCTTCCTCGTCCATACCAGCATACGAACGATTTGCAACCCCTGAACGCATTTCGCGTATGTGAGCAGTTTCGCTGGTTCCAGTGGAATCATTTGTTAGGTCAATTGTACCGTTAGGTTCATTGCTACCGCGATCACTGTCCCCCTCATTTGGATAGTCTTTATCATGCTCAAAGACAAAGTCTGAATCGAAATTCCCACCCTGTCTAACCATTCGTTTTCGTCTTTTAACGCGTTCACCAAGAACCTGGCTATAAGAACCGATTGCATCATCCCAGGTCCGTTCATCAGGACCTTTGGTGCGTTCAGAGGCGGATTTTGATAAACCGGGCCCACTAACCGGATAATTGACTGTCCAAGACTGCAAATCTTCAAGTTCGTTTTTCCGGCGTTTGCGTCTTCTTAACACAGAATTGCTCTTTCGTTTCCACCACGGTTGAGGAGTACTTGTAATTGTTGATAACAAATTCGAGTCAGTACGAGCAGGTTGATTCTGGGTACGA]

[+] EMBL CD151715             [ATGTGCGTCAGCTTCTTCTTCAGGTCTTAATACGGCAATCACATTCGCACCATCTCGTATGTTGAGCAACAACAATGTAAGGAAGTTGAGTAATTGACCAGTAGGAATTTGATTAGCAACACCTATTGAGTTTAATTTAGCAGCATCACGACAAAATTCTGCCAAGTCTTCAGACGATATTATAGTCTCAGTTGATAAGCTTTCTTTATCAAGATATGAAATCACATCTTCACAATTAGATTTTCGTAGTTGATCATCACTGTTCGGTACGCCACCAAGGCTTCTCAAAAAGTCTGTTTCCTCAATAGATTCGAGAACAGTTGACAACTTGTTGAGAAATCGTTTTACACTTCCCGTTTCACCTCCAACACTTTGTTCCCTAGGATTATTTCGTTGGATGGGTAAATTATTTGATGCCGTAATTCCGAAATTTACGCGTTCACGTCGTTTACGCGTAGATTCTCCTGCTTTACGTATATGCGGGAAACGTGCTTCAACAGGTTCCTTCAGCCGAACTTCAAAAGGTTCATCATCATCCAGTTTCTTTCGTCTTCTAGCACTTGAAGAGCCATTTGAGCACCCTGTTTGACTTGCCGACGCTTCCTCGTCTTCCTCGTCCATACCAGCATACGAACGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD191105             [                                                                                                                                                               TGCCAAGTCTTCAGACGATATTATAGTCTCAGTGNATAAGCTTTCTTTATCAAGATATGAAATCACATCTTCACAATTAGATTTTCGTAGTTGATCATCACTGTTCGGTACGCCACCAAGGCCTCTCAAAAAGTCTGTTTCCTCAATAGATTCGAGAACAGTTGACAACTTGTTGAGAAATCGTTTTACACTTCCCGTTTCACCTCCAACACTTTGTTCCCTAGGATTATTTCGTTGGATGGGTAAATTATTTGATGCCGTAATTCCGAAATTTACGCGTTCACGTCGTTTACGCGTAGATTCTCCTGCTTTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD193223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGCCATNTGAGCACCCTGTTTGACTTGCCGACGCTTCCTCGTCTTCCTCGTCCATACCAGCATACGAACGATTTGCAACCCCTGAACGCATTTCGCGTATGTGAGCAGTTTCGCTGGTTCCAGTGGAATCATTTGTTAGGTCAATTGTACCGTTAGGTTCATTGCTACCGCGATCACTGTCCCCCTCATTTGGATAGTCTTTATCATGCTCAAAGACAAAGTCTGAATCGAAATTCCCACCCTGTCTAACCATTCGTTTTCGTCTTTTAACGCGTTCACCAAGAACCTGGCTATAAGAACCGATTGCATCATCCCAGGTCCGTTCATCAGGACCTTTGGTGCGTTCAGAGGCGGATTTTGATAAACCGGGCCCACTAACCGGATAATTGACTGTCCAAGACTGCAAATCTTCAAGTTCGTTTTTCCGGCGTTTGCGTCTTCTTAACACAGAATTGCTCTTTCGTTTCCACCACGGTTGAGGAGTACTTGTAATTGTTGATAACAAATTCGAGTCAGTACGAGCAGGTTGATTCTGGGTACGA]
[-] EMBL CD183401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CATACGAACGATTTGCAACCCCTGAACGCATTTCGCGTATGTGAGCAGTTTCGCTGGTTCCAGTGGAATCATTTGTTAGGTCAATTGTACCGTTAGGTTCATTGCTACCGCGATCACTGTCCCCCTCATTTGGATAGTCTTTATCATGCTCAAAGACAAAGTCTGAATCGAAATTCCCACCCTGTCTAACCATTCGTTTTCGTCTTTTAACACGTTCACCAAGAACCTGGCTATAAGAACCGATTGCATCATCCCAGGTCCGTTCATCAGGACCTTTGGTGCGTTCAGAGGCGGATTTTGATAAACCGGGCCCACTAACCGGATAATTGACTGTCCAAGACTGCAAATCTTCAAGTTCGTTTTTCCGGCGTTTGCGTCTTCTTAACACAGTATTGCTCTTTCGTTTCCACCACGGTTGAGGAGTACTTGTAATTGTTGATAACAAATTCGAGTCAGTACGAGCAGGT               ]


>consensus_6949#0 ATGTGCGTCAGCTTCTTCTTCAGGTCTTAATACGGCAATCACATTCGCACCATCTCGTAT GTTGAGCAACAACAATGTAAGGAAGTTGAGTAATTGACCAGTAGGAATTTGATTAGCAAC ACCTATTGAGTTTAATTTAGCAGCATCACGACAAAATTCTGCCAAGTCTTCAGACGATAT TATAGTCTCAGTTGATAAGCTTTCTTTATCAAGATATGAAATCACATCTTCACAATTAGA TTTTCGTAGTTGATCATCACTGTTCGGTACGCCACCAAGGCTTCTCAAAAAGTCTGTTTC CTCAATAGATTCGAGAACAGTTGACAACTTGTTGAGAAATCGTTTTACACTTCCCGTTTC ACCTCCAACACTTTGTTCCCTAGGATTATTTCGTTGGATGGGTAAATTATTTGATGCCGT AATTCCGAAATTTACGCGTTCACGTCGTTTACGCGTAGATTCTCCTGCTTTACGTATATG CGGGAAACGTGCTTCAACAGGTTCCTTCAGCCGAACTTCAAAAGGTTCATCATCATCCAG TTTCTTTCGTCTTCTAGCACTTGAAGAGCCATTTGAGCACCCTGTTTGACTTGCCGACGC TTCCTCGTCTTCCTCGTCCATACCAGCATACGAACGATTTGCAACCCCTGAACGCATTTC GCGTATGTGAGCAGTTTCGCTGGTTCCAGTGGAATCATTTGTTAGGTCAATTGTACCGTT AGGTTCATTGCTACCGCGATCACTGTCCCCCTCATTTGGATAGTCTTTATCATGCTCAAA GACAAAGTCTGAATCGAAATTCCCACCCTGTCTAACCATTCGTTTTCGTCTTTTAACGCG TTCACCAAGAACCTGGCTATAAGAACCGATTGCATCATCCCAGGTCCGTTCATCAGGACC TTTGGTGCGTTCAGAGGCGGATTTTGATAAACCGGGCCCACTAACCGGATAATTGACTGT CCAAGACTGCAAATCTTCAAGTTCGTTTTTCCGGCGTTTGCGTCTTCTTAACACAGAATT GCTCTTTCGTTTCCACCACGGTTGAGGAGTACTTGTAATTGTTGATAACAAATTCGAGTC AGTACGAGCAGGTTGATTCTGGGTACGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)