These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_700#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 120 fasta sequence [GAGCTGGTCCACATTTCACGAGTACCACCGTAATTACCACATCTCCACCACTGCAACCTCCACCATAGCCGCCGCCACAGTCACCACCAGTACAGTCCTCCACTTTATGAACTCTGTATG] [+] EMBL CD128581 [GAGCTGGTCCACATTTCACGAGTACCACCGTAATTACCACATCTCCACCACTGCAACCTCCACCATAGCCGCCGCCACAGTCACCACCAGTACAGTCCTCCACTTTATGAACTCTGTATG] consensusID : consensus_700#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 98 fasta sequence [TATGGCATACAGATTCATAAAGTGGATATGGTGGAGGCTGTACTGGTGGTGACTGTGGCGGCGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGT] [+] EMBL CD128682 [TATGGCATACAGATTCATAAAGTGGATATGGTGGAGGCTGTACTGGTGGTGACTGTGGCGGCGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_700#0 GAGCTGGTCCACATTTCACGAGTAC-CACCGTAATTACCACATCTCCACC-ACTGCAACC 58 consensus_700#1 TATGGCATACAGATTCATAAAGTGGATATGGTGGAGGCTGTACTGGTGGTGACTGTGGCG 60 * * ** *** *** * ** * * **** * consensus_700#0 TCCACCATAGCCGCCGCCACAGTCACCACCAGTACAGTCCTCCACTTTATGAACTCTGTA 118 consensus_700#1 GCGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGT---------------------- 98 * * ** * * * **** * * ** consensus_700#0 TG 120 consensus_700#1 -- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||