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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7060 cluster # 7060       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7060#0 length = 1025 sequences # 4  

consensusID : consensus_7060#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1025
fasta sequence
                              [TTGTTCAATCCACAGATATAAACAGGCAGTATGAAAAATATGTCCACAGGGGAGTTGACAAGATTTGCGCATTTTCTCCCAACAAATAGGACAATTTTCTTTGGAATAAACAATCCGAGTATCCAATTTTTTTAGTACATTCTTATAGCGTTTGTGATGCACAAAACGTTTAGAAACTTTGTAGTATAAATGTTGAAGGTGCAAGGCAACAATAATGCTCGACATATTTATTTGAAGTTTATTCCAAAATAACATATGGAGGTTATGGAATACATCGCCAAAATCAGCAATTGTATCGAAAACAAACTCCGTGTAATAAAGAAGCACAAAGCGATGGTACACTTTATCGTCATCATTAAGACGCGAGGCGACTTCGCAATATAGATAAACTACATACCACGTGATAACATGCACAGTGACAATCAAAAGTTGGAATACCTCTGCAAGCATAAAGAACATAGTATTGAGAGAATGCTTAGCACCCACGATGATTGAGATAATCATAAGAACGTTGCTGAAAGCAGGAGTAAACAGCATAGTAAAAATATTCGGGCTTGATAGGTAAGAGAGAAATCAGAACAACGAAGGGTGTACTGGGAACGATCCCTGATAAGACCAGTAAGAAGACGCAGAAAGCCAAGTATGGTAAACCA-AGTTGCCCAAAGAAGGAGTTCATGAAGAACTTCTACGTGCAGAATACCATAAATGAAAACCACCTTATAGAAAATAAAACTAGAGAAATTTTCCCTGATATGTGAGTCTTCAGCGCTTCGAAGTTGACCGAAAAACAAATTTTGCAGTTCCCTTGCAGCGTACATCAGCAAACAATATCCAGAGTTTATAAGGCTCCAAAAACACCAACTGTCCTCCAGACAGCAAGTTAATGCCATTGTTGGGTAGTTTAGTGAGGTAGAATTTCCTGTTCCTTCAGGTTTAGCATCTTTAGTCATCTGAAAGAATACATGTAATACAGATCCTAGTAACGTGCCAGTTGTATAAACTACATATGTAGAAAAGTTCGGCAA]

[+] EMBL CD097372             [TTGTTCAATCCACAGATATAAACAGGCAGTATGAAAAATATGTCCACAGGGGAGTTGACAAGATTTGCGCATTTTCTCCCAACAAATAGGACAATTTTCTTTGGAATAAACAATCCGAGTATCCAATTTTTTTAGTACATTCTTATAGCGTTTGTGATGCACAAAACGTTTAGAAACTTTGTAGTATAAATGTTGAAGGTGCAAGGCAACAATAATGCTCGACATATTTATTTGAAGTTTATTCCAAAATAACATATGGAGGTTATGGAATACATCGCCAAAATCAGCAATTGTATCGAAAACAAACTCCGTGTAATAAAGAAGCACAAAGCGATGGTACACTTTATCGTCATCATTAAGACGCGAGGCGACTTCGCAATATAGATAAACTACATACCACGTGATAACATGCACAGTGACAATCAAAAGTTGGAATACCTCTGCAAGCATAAAGAACATAGTATTGAGAGAATGCTTAGCACCCACGATGATTGAGATAATCATAAGAACGTTGCTGAAAGCAGGAGTAAACAGCATAGTAAAAATATTCGGGCTTGATAGGTAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD116257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGAGTAAACAGCATAGTAAAAATATTCGGGCTTGATAGGTAAGAGAGAAATCAGAACAACGAAGGGTGTACTGGGAACGATCCCTGATAAGACCAGTAAGAAGACGCAGAAAGCCAAGTATGGTAACCCA AGTTGCCCAAAGAAGGAGTTCATGAAGAACTTCTACGTGCAGAATACCATAAATGAAAACCACCTTATAGAAAATAAAACTAGAGAAATTTTCCCTGATATGTGAGTCTTCAGCGCTTCGAAGTTGACCGAAAAACAAATTTTGCAGTTCCCTTGCAGCGTACATCAGCAAACAATATCCAGAGTTTATAAGGCTCCAAAAACACCAACTGTCCTCCAGACAGCAAGTTAATGCCATTGTTGGGTAGTTTAGTGAGGTAGAATTTCCTGTTCCTTCAGGTTTAGCATCTTTAGTCATCTGAAAGAATACATGTAATACAGATCCTAGTAACGTGCCAG                                  ]
[-] EMBL CD168276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAGTAAAAATATTCGGGCTTGATAGGTAAGAGAGAAATCAGAACAACGAAGAGTGTACTGGGAACGATCCCTGATAAGACCAGTAAGAAGACGCAGAAAGCCAAGTATGGTAAACCACAGAAGCCCgg                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD129507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTACTGGGAACGATCCCTGATAAGACCAGTAAGAAGACGCAGAAAGCCAAGTATGGTAAACCA AGTTGCCCAAAGAAGGAGTTCATGAAGAACTTCTACGTGCAGAATACCATAAATGAAAACCACCTTATAGAAAATAAAACTAGAGAAATTTTCCCTGATATGTGAGTCTTCAGCGCTTCGAAGTTGACCGAAAAACAAATTTTGCAGTTCCCTTGCAGCGTACATCAGCAAACAATATCCAGAGTTTATAAGGCTCCAAAAACACCAACTGTCCTCCAGACAGCAAGTTAATGCCATTGTTGGGTAGTTTAGTGAGGTAGAATTTCCTGTTCCTTCAGGTTTAGCATCTTTAGTCATCTGAAAGAATACATGTAATACAGATCCTAGTAACGATACTGTTGTATAAACTACATATGTAGAAAAGTTCGGCAA]


>consensus_7060#0 TTGTTCAATCCACAGATATAAACAGGCAGTATGAAAAATATGTCCACAGGGGAGTTGACA AGATTTGCGCATTTTCTCCCAACAAATAGGACAATTTTCTTTGGAATAAACAATCCGAGT ATCCAATTTTTTTAGTACATTCTTATAGCGTTTGTGATGCACAAAACGTTTAGAAACTTT GTAGTATAAATGTTGAAGGTGCAAGGCAACAATAATGCTCGACATATTTATTTGAAGTTT ATTCCAAAATAACATATGGAGGTTATGGAATACATCGCCAAAATCAGCAATTGTATCGAA AACAAACTCCGTGTAATAAAGAAGCACAAAGCGATGGTACACTTTATCGTCATCATTAAG ACGCGAGGCGACTTCGCAATATAGATAAACTACATACCACGTGATAACATGCACAGTGAC AATCAAAAGTTGGAATACCTCTGCAAGCATAAAGAACATAGTATTGAGAGAATGCTTAGC ACCCACGATGATTGAGATAATCATAAGAACGTTGCTGAAAGCAGGAGTAAACAGCATAGT AAAAATATTCGGGCTTGATAGGTAAGAGAGAAATCAGAACAACGAAGGGTGTACTGGGAA CGATCCCTGATAAGACCAGTAAGAAGACGCAGAAAGCCAAGTATGGTAAACCAAGTTGCC CAAAGAAGGAGTTCATGAAGAACTTCTACGTGCAGAATACCATAAATGAAAACCACCTTA TAGAAAATAAAACTAGAGAAATTTTCCCTGATATGTGAGTCTTCAGCGCTTCGAAGTTGA CCGAAAAACAAATTTTGCAGTTCCCTTGCAGCGTACATCAGCAAACAATATCCAGAGTTT ATAAGGCTCCAAAAACACCAACTGTCCTCCAGACAGCAAGTTAATGCCATTGTTGGGTAG TTTAGTGAGGTAGAATTTCCTGTTCCTTCAGGTTTAGCATCTTTAGTCATCTGAAAGAAT ACATGTAATACAGATCCTAGTAACGTGCCAGTTGTATAAACTACATATGTAGAAAAGTTC GGCAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)