Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7235 cluster # 7235       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7235#0 length = 605 sequences # 5  
consensusID : consensus_7235#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 605
fasta sequence 
                              [GGCTGCGGCATCACGAGATTGTTGAGTGGAGTTATTATCCAGCAAATCTGCTGGCGGACGCTGGAGAGTTGATGCAGCAGTTGAACCCTGACGCACTTGACTTAGTCGGTAAACATAACCTGTATGGTATCCAGCAGAGTCCAATCTACGCATTAATGCCTCGAATTCAAGTTCTCCACGCCTCCAACCTGAACTACCAGTGACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACGTCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTCATCCAGACTAATGCTCGCCAAACGTAACTGTGCTTCGCACGCTAACATGGATGTAAAAGCAATAAACCATGCTTCCTCAATTGACTGTCCCAAAGCTAAGAGACCATAACTACGAACCAATAAAACCATACAACTGGGAGATCTTTCCAAAAATATCCGAGATATTTCTGCTTTCTGTGCATCAAAATGACGCTTTTTACGAGAGTCTAAGTCTTCTTCTCCATTTTGCTGAAGATTATTCAAAACAATTAACGGGGTCGTAAACAGCTGTCTCACCCAAAATCATGGCTTCTTGGCTGATTGGTAAAAGACCT]

[+] EMBL CD061029             [GGCTGCGGCATCACGAGATTGTTGAGTGGAGTTATTATCCAGCAAATCTGCTGGCGGACGCTGGAGAGTTGATGCAGCAGTTGAACCCTGACGCACTTGACTTAGTCGGTAAACATAACCTGTATGGTATCCAGCAGAGTCCAATCTACGCATTAATGCCTCGAATTCAAGTTCTCCACGCCTCCAACCTGAACTACCAGTGACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACGTCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTCATCCAGACTAATGCTCGCCAAACGTAACTGTGCTTCGCACGCTAACATGGATGTAAAAGCAATAAACCATGCTTCCTCAATTGACTGTCCCAAAGCTAAGAGACCATAACTACGAACCAATAAAACCATACAACTGGGAGATCTTTCCAAAAATATCCGAGATATTTCTGCTTTCTGTGCATCAAAATGACGCTTTTTACGAGAGTCTAAGTCTTCTTCTCCATTTTGCTGAAGATTATTCAAAACAATTAACGGGGTCGTAAACAGCTGTCTCACCCAAAATCATGGCTTCTTGGCTGATTGGTAAAAGACCT]
[-] EMBL CD178382             [           CACGAGATTGTTGAGTGGAGTTATTATCCAGCAAATCTGCTGGCGGACGCTGGAGAGTTGATGCAGCAGTTGAACCCTGACGCACTTGACTTAGTCGGTAAACATAACCTGTATGGTATCCAGCAGAGTCCAATCTACGCATTAATGCCTCGAATTCAAGTTCTCCACGCCTCCAACCTGAACTACCAGTGACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACGTCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTCATCCAGACTAATGCTCGCCAAACGTAACTGTGCTTCGCACGCTAACATGGATGTAAA                                                                                                                                                                                                                                                                 ]
[+] EMBL CD126127             [                     TTGAGTG  GTTATTATCCAGCAAATCTGCTGGCGGACGCTGGAGAGTTGATGCAGCAGTTGAACCCTGACGCACTTGACTTAGTCGGTAAACATAACCTGTATGGTATCCAGCAGAGTCCAATCTACGCATTAATGCCTCGAATCCAAGTTCTCCACGCCTCCAACCTGAACTACCAGTAACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACGTCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTC                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD195098             [                                                                                                                                                      CATTAATGCCTCGAATTCAAGTTCTCCACGCCTCCAACCTGAACTACCAGTGACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACGTCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTCATCCAGACTAATGCTCG                                                                                                                                                                                                                                                                                                         ]
[-] EMBL SM58051              [                                                                                                                                                                                                                                                                                            CCAATTCATCCAGACTAATGCTCGCCAAACGTAA ACTGC TCGCACGCTAACATGGATGTAAAAGCAATAAACCATGCTTCCTCAATTGACTGTCCCAAAGCTAAGAGACCATAACTACGAACCAATAAAACCATACAACTGGGAGATCTTTCCAAAAATATCCGAGATATTTCTGCTTTCTGTGCATCAAAATG                                                                                                                             ]




>consensus_7235#0
GGCTGCGGCATCACGAGATTGTTGAGTGGAGTTATTATCCAGCAAATCTGCTGGCGGACG
CTGGAGAGTTGATGCAGCAGTTGAACCCTGACGCACTTGACTTAGTCGGTAAACATAACC
TGTATGGTATCCAGCAGAGTCCAATCTACGCATTAATGCCTCGAATTCAAGTTCTCCACG
CCTCCAACCTGAACTACCAGTGACTTCGCCAACTCGCAGTTGAACAGCAGAAGGAGTACG
TCCTACTGAGTGGGCGGCTTCTTGAGCTTCTTTGGTAGGGATAACCAATTCATCCAGACT
AATGCTCGCCAAACGTAACTGTGCTTCGCACGCTAACATGGATGTAAAAGCAATAAACCA
TGCTTCCTCAATTGACTGTCCCAAAGCTAAGAGACCATAACTACGAACCAATAAAACCAT
ACAACTGGGAGATCTTTCCAAAAATATCCGAGATATTTCTGCTTTCTGTGCATCAAAATG
ACGCTTTTTACGAGAGTCTAAGTCTTCTTCTCCATTTTGCTGAAGATTATTCAAAACAAT
TAACGGGGTCGTAAACAGCTGTCTCACCCAAAATCATGGCTTCTTGGCTGATTGGTAAAA
GACCT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)